Gene detail

Detail information of Am05G031270.1 Annotation

Gene ID	Annotation
Am05G031270.1	auxin response factor 6

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G031270.1	mRNA	Chr05	156227194	156234820	+

Sequences

CDS:

>Am05G031270.1
ATGAAGTTATCTTCAGCTGGTTTTAGTCCTCCACCTCAGGAAGGAGAAAAGCGAGTTCTAGATTCAGAACTTTGGCATGCTTGTGCTGGTCCTCTTGTTTCTTTGCCAGCTGTTGGAAGCCGTGTGGTCTACTTTCCACAAGGTCACAGTGAACAGGTTGCTGTATCTACCAACAAGGAAGTTGATGCTCATATCCCCAACTATCCAAGCTTACCTCCCCAACTTGTTTGTCAACTTCATAATTTGACTATGCATGCAGACACTGAGACAGATGAAGTGTATGCACAAATGACTTTGCAACCTCTGAATCCTGAAGAGCAAAAGGAGGCATATCTACCTGCAGAGTTGGGAACTCCAAGTAAGCAGCCAACAAACTACTTTTGCAAAATTTTGACTGCTAGCGACACGAGTACTCATGGGGGATTCTCAGTTCCTCGCCGCGCAGCTGAAAAAGTTTTTCCTCCATTGGACTTTTCACAACAGCCTCCTTGTCAAGAGTTAATCGCAAGGGACTTGCACGGCAACGAGTGGAAATTCAGACATATCTTCCGTGGTCAGCCCAAAAGGCATTTACTTACAACTGGATGGAGTGTCTTTGTGAGTGCTAAAAGACTTGTTGCCGGTGATTCCGTGCTGTTTATCTGGAATGAAAAGAATCAATTACTTCTTGGCATTCGGCGTGCTAATCGATCCCAACCTGTTATGCCTTCATCAGTGTTGTCGAGTGATAGCATGCACTTGGGGCTTCTTGCTGCTGCAGCTCATGCAGCTGCAACAAATAGCCGATTCACCATTTTCTATAACCCACGTGCTTGCCCATCAGAATTTGTCATACCTCTAGCAAAGTATGTTAAAGCTGCATATCATACTCGAGTTTCAGTTGGTATGCGCTTCAGGATGCTGTTTGAAACAGAGGAATCTAGTGTTCGGCGATACATGGGTACAATAACTGGCATTTGTGACCTGGATTCTGTCCGGTGGCCAAATTCACATTGGCGCTCAGTAAAGGTTGGCTGGGATGAATCCACAGCAGGTGAGAGGCAACCTAGAGTGTCCCTATGGGAAATTGAGCCATTAACAACATTTCCAATGTATCCATCTCCATTCCCACTTAGGCTTAAAAGACCATGGCCTCCAGGACTGCCTTCATTCCATGGCTTGAAGGATGATGATTTTGGCATGAATTCTTCACTAATGTGGCTCAGAGACCCAGATAGAGGACTTCAGACTCTTAATTTTCAAGGGGTTGGTGGTGTTAATTCTTGGATGCAGCCAAGACTTGATCCCTCCATAATGAATTTGCAACCAGATATGTACCAAGCTATGGCCACTGCTGCACTTCAGGATATGAGGACTTTAGATCCTTCAAAACAATATCCTGCTTCTTTACTTCAATTTCAGCAACCACAGAACTTCCCCAATGGTTCTGCTTCTTTGATGCAGGCCCAGATGTTGCAGCAGTCTCAACCTCAGCAGTCTCAATCTCAGGCTCAAACCCAACCAAATTTCCAGCAGCTTCTTCAGCATCAACACTCTTTCAATAATCAGAATCATCACCATCACCTGCAGCAACAGCAACAGCAACAGCCGCAGCAGCAGCAGCAGCAACCACAGCTGGTAAATCATCAGCAAAATTCAAGTGCTGTCTCCACAATGGCTCAGTTTGTTTCAGCGTCTCAATCTCAATCACCACCCATGCAAGCTATCTCATCATCGGGCCATCAGCAAAACTTTTCTGATTCAAATGGGAACCCTGTAACTACTGCTAATGTTTCTCCTCTACACAATATATTGGGTTCATTTCCCAATGATGAAACATCTCACCTTCATAACCTTTCTAGACCAACTTCTTGGGTTCCTGTTCAACCTTCAACTGCATGGCCCTCCAAGCGTGTTGCGGTGGATCCTCTCCTTTCTTCGGGAGCATCTCATTGTTTTCTGCCTCAAGTGGAGCAGCTAGGGCAGCCACAGACGATCATGTCTCAAAATGCTATTACCTTGCCACCGTTTCCTGGTAGGGAGTGTGCAATAGAAGGGAACACTGATCCACAAAACCATATTTTGTTTGGTGTTAACATAGATCCCTCGTCACTTTTCATGCATAATGAGATGTCGAACCTTAAGGGTGTTGGCGGCAACTGTGACTCGTCAACTTTACCTTTTCAATCTTCTAATTACCCGAATACTTTAGGGACTGATTCTTCATTGAATCCTGGAATGACACACAGCATTGGTGAGTCTGGCTTCCCGCAAACTCCAGAAAATGGAGGCCAGGGAAACTCACCAATCAAAACCTTTGTGAAGGTTTATAAGTCGGGGTCCTTCGGAAGATCGTTGGATATCACTAAATTCTCCAACTACCACGAGCTACGCGGCGAGCTTGCTCGTATGTTTGGGCTTGAACGTGAGTTGGAGGACCCTGTGAGATCAGGCTGGCAGCTTGTATTTGTTGACCAAGAGAATGATGTTCTTCTCCTTGGTGACGGCCCTTGGCCGGAATTTGTAAGTAGTGTAGGGTGCATCAAGATACTTTCCCCTCAGGAAGTGCAGCAAATGGGAAACAATGACCTCGGGCTTCTGAACTCGGCTTCAATTCAGAGGCTCTCTAATGGCATCAGTGATGATTACACGGGCCGTGACGACCCAAGAAATTTCAGCACCGGGTTAGCTACTGTGGGGTCTTTAGACTACTAA

Protein:

Promoter(3k):

>AM05G031270.1
CTTCGTGGCTTTACTTCACTCTTTGGACTATTTGGAATGCTAGGAATGACAAAGTCTTTAATAACAAAGCTCCCAATCCTCTAAGTGCTCTTCTTAAGATCAAATCACTCTGTTATGAGTTCTTAGGTGCAACAACAATCAAAATCAACAATACCAATCATGAATCAATGATACAGCAGGTATGTCTGCAGGCCTCTCCATCTCAATGGAGACCACCTCGTGACCCGTTTGTGAAATTTAATGTTGATGCAGCATTTGAACACACAACAGGCAAGGGACATACAGGAATTATATGCAGAGATTCTCAGGGGAAATTACTTACAGCTGCAACCACTAGATTCTATGCTTCATCCCCTCTTGTAGCTGAACCCTTGAGCCTCCGTGATGCTGTCTCCTTTGCGGTTAACCTCCACTTCGATCAAGTCATCTTTGAATCTGATAATAAAACCCTCATTGAGGTGTGTAGAAAGAGTATCGTAAGACAAGAGATTCAAGGAATAGCTAATGATATTAATTCTCTTTGTTCAAACTTCCAACAATCTGGTCTTACTTGGACAAAGAGAGAAGGGAATGAGTGTGCTCACACTGTTGCAGCTCTTGCTCGTGACGACCAGCTTCATGGATCTTGGGTTCTTCGTCCTCCATCGCTTCTTCGCCGTGCCATAGTGAAAGATGCTCAAGCTCTCTGGAAGTAGGACATTGTTGCAATTGAGATGGTCCTATGCTGATTTCCACCATGAAGCTCTTCATGATGCTCAAGCTTTCCGATTTTCTCAGTCTGGGTTGACGCTAGCGCTGGAATTGAGTTAGTGGAGAACTAGGTTTTTCTTTTTACCCGATTTGGGATCTGTTTTTTTCGTGTGTTTGTGTTATTTTTGCTTCTTATGGTGTCCAATTATTGGCCCCTATGTTAACGCTATCTACTAGCTAGATTTGGCCCTGGGTGTTTAGCACAATACGGCCATGTTACTGTTGTTCAGTTTTAGGTGTATGGTTTGGGCCTGGCTCATTTTATTATTGAAAATCATATATCCTTTTGACCAAAAAAAAAAAAACATGTGTATGTTGGTACTAGACACTCTCGGTGACTTTTACAAGGTTTAGGGATTGGAGGTCAATATACACTGAAGGCACATGTCCTAATATGGTCTCGGGGGTAAAAAGCACATTTTTCAAGACAATTTCTTCCATCATGTGTTGTGGCATATTTGGCCATTATTTGAGTTTCCCTCTAATTAATTTAAGGGAGAGTTCAATGAGAAGACTGAAATAACTATGATCAATCATGCTGAAGATTCAAAGGTGTCTTGCTGCTTATAAGGACAATCTCCTAAATAAAGCAACATGATTGACCATAGTTATTTCAGTCTATTCTATGCAATCTCACAACATAGAAATTGCCGTAAATTTAGTTTTGAAAGCCTTGTGAATCAATTTTCGACTTTTCTTCACAAAATGCCATCTTCAAGTCGATTCATGCGCGAGCCTGATGTGTTTTAAGTTTTTTTCTGGATTTTTTTATAGGCAATGTTAGTGGGGGATGGAGGAATGTTTTCTGAGGTTTGAACCTGGGACCTCCTGCTTGCACTCCTTTGGTGCACTATTTCGGTATCTTTTAGCTCGCCAACTGAATTTGAGATGTTTTTCTTTGGATTGAGATTTTCATTGTAAGTTGTAAGTTGTAACACTCATTTCACCCCAATGTCTCTAATTATATCTTGATATGAATTTTCTATGATTGATTCACAGTAGAAGAAACCGGTGGGTTGCTTTCTCCCGGAGACGCAGGCAGGTTACATGAGTGAACCAGGTAACAGCTCGTGTGTACAACCCTCTAATCCCTTATTGATTTGTGATTTCTTGTGATATGTTTTTTTGTTGATAAAATTCCAGTCCATGTTTTTTGTTGCTTTCTTGCGCATTAATTGCTGTCATATTGCTCTAGTAAAAAAAGTACTACTAGTCTAGTATTAGTATACAGTACAAGTATTTGAAGTATTTGATGAACATAAAAATAAAGCAAAATACGAAATTGTGAAACGGTGAGTGAATGATATGAAAGTGAGGCCTTCTCAAAAAAAAATCATCTGATCTGAGTCATCTGACAGAGGCACGTACTCTCTTCTCTCTTTCTTTCTCTTCTTAAAACCACACACCCGAAAACAATGGCGTTTCTGTCTTCACCAACTTAACTCAAGCATAGGTAAATAGATAGAGAAGTAAAAGCAACAGTAGTGGCAACTAGCAAGAAAGCCAACAGTCGCCGCCGCCGCAACGACTAAAACTGCAACCCATTTCCCTTACTTGGAAACCCGACCCGACCCGACTATTTCCCCATTCTTTTTTGCAAAAAGGAGGCGTGAGCTCACTGTTTTCTTGTCCCCTCCGTAAGAAAAAAAACAAGTACCTACGTTTGTATTCTTGGTCGTTTTCCGTTACAACGTTTGCTTTAGCTTATTGTGCTGATTCCCAACTCCATTTTGCTCTCTTTCACAAGATCTGGTGCACTCTGGGATTCGTTGCTACTTTGGCTGAGATCTGTTTAGTTTTTAACTTGTTTCTGGGTTGTTCTTGGTTTTTAAGCTTCTTGCCAAATTTGAACTTGTGAACTTGCTTCTGTGGTGTAAACGTTTGTATGATGAAGTGTTTGTTTGAAGATTGGAACTTTGGGTGGTGGGGGTTGAGGAAGATTGGAAACGAATGAAGGGTAGAAGTAAGACGTTTCTCTTTTGGAGTGACACTGGTTTTGGTTGAGGGAATATTCAAAAGGAAAGGGTGGGAATTTTTTGACCCTTTTTAGCATTTCTTGTTGATGGTCGAAGCAATTCAGTATCTGGGTATTTGAGTTTTGTTTGGATTTAAAGATAAGAAGAATGATTTTTGGTTTGGGGTTTACTTTGTTGGAATTCCGTTGCTGCTCAATTTGTGTACTTAAAAAAGTGTTCCTAAATTATTGATTTTGGGGGCGGTTTTAACTTAAAGAAGTTTGAAATTGCTGAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF06507.16	Auxin_resp	253	336	9.30E-34
PF02362.24	B3	127	228	3.40E-23
PF02309.19	AUX_IAA	761	849	5.30E-08

Gene family

Gene family	Subfamily
Transcription Factors Family	B3
Transcription Factors Family	B3-ARF

Gene Ontology

GO term	Description	Category
GO:0009734	auxin-activated signaling pathway	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0003677	DNA binding	Molecular Function
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0009908	flower development	Biological Process

InterPro

InterPro term	Description
IPR000270	PB1 domain
IPR015300	DNA-binding pseudobarrel domain superfamily
IPR003340	B3 DNA binding domain
IPR010525	Auxin response factor domain
IPR044835	Auxin response factor
IPR033389	AUX/IAA domain

trEMBL

trEMBL term	Description
A0AAN9KLE8	_

SwissProt

SwissProt term	Description
ARFF_ORYSJ	Auxin response factor 6

KEGG

KO	Description	Enzyme
K14486	auxin response factor

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G30330	auxin response factor 6
Medicago sativa L.	MsG0480022911.01.T01	_
Oryza sativa L.	LOC_Os02g06910.1	auxin response factor 6, putative, expressed
Cucumis sativus L.	Csa021954	_
Glycyrrhiza uralensis Fisch.	Glyur000413s00015469.1	_
Codonopsis lanceolata	Cl_chr01_42880T	_
Arachis hypogaea L.	AH13G51320.1	Auxin response factor 6 like

Expression pattern