| Gene ID | Annotation |
|---|---|
| Am05G030650.1 | 3'-5'-exoribonuclease family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G030650.1 | mRNA | Chr05 | 154421594 | 154425327 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF01138.24 | RNase_PH | 47 | 180 | 2.20E-22 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0071042 | nuclear polyadenylation-dependent mRNA catabolic process | Biological Process |
| GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | Molecular Function |
| GO:0005737 | cytoplasm | Cellular Component |
| GO:0016075 | rRNA catabolic process | Biological Process |
| GO:0000288 | nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | Biological Process |
| InterPro term | Description |
|---|---|
| IPR020568 | Ribosomal protein S5 domain 2-type fold |
| IPR027408 | PNPase/RNase PH domain superfamily |
| IPR033196 | Exosome complex component Rrp43 |
| IPR015847 | Exoribonuclease, phosphorolytic domain 2 |
| IPR001247 | Exoribonuclease, phosphorolytic domain 1 |
| IPR036345 | Exoribonuclease, PH domain 2 superfamily |
| trEMBL term | Description |
|---|---|
| A0A1S2Y2R8 | _ |
| SwissProt term | Description |
|---|---|
| EXOS8_HUMAN | Exosome complex component RRP43 |
| KO | Description | Enzyme |
|---|---|---|
| K12586 | exosome complex component RRP43 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G60080 | 3'-5'-exoribonuclease family protein |
| Medicago sativa L. | MsG0180000857.01.T01 | _ |
| Oryza sativa L. | LOC_Os11g20689.1 | exosome complex exonuclease, putative, expressed |
| Cucumis sativus L. | Csa019868 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur002275s00030373.1 | _ |
| Codonopsis lanceolata | Cl_chr08_02890T | _ |
| Arachis hypogaea L. | AH16G04580.1 | Exosome complex component RRP43 like |