Gene detail

Detail information of Am05G029850.1 Annotation

Gene ID	Annotation
Am05G029850.1	Mitochondrial substrate carrier family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G029850.1	mRNA	Chr05	152477842	152482626	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM05G029850.1
AAATGCGGAAAAAGAGATTTGAACTTATCAGATATATGCAAGTAGGCAGATTAGGCACAATGAGATATTATTCTATATTCAATATTTACAATAAGGTTGTTTTATAAGTAATGCAATGATATTGAATATAGCAGATCTACAGTAGTGATAGAGAAGATGATAGATAAACAGATCTGTAGTACAACGAGTATAACTATAACCAGATTAACAGATTCAGATCAGAGTAGGGATATAGTTATAGATTAACAGATTCAGATCAGAGTAGGGATATAGTTATAGATTAACAGATTCAGATCAGAGTAGTGATATTATAAACAGATATAAACAGTAAATAAAGTAAAGAGAGAGAGATAGAGATACACCAGGAATTTTACGAGGTTCGGGATAAAAGCCCTACGTCCTCGGCCTCCGGCTTTGCAACTTTTGGACTTTGCTGATAACCACTATATGAAGAACCAATGTTTTACAAACAATCAACTTCAAATAGCAAATCTCAATTCCCCTGAATTGAGAACCCGAGCTCCCCGCTAAGGATTTCAACCGCTTCAATCTCCTGATTGAACGACCCAAGAGCACCTCCCAGGATTTCACTACCGCTTCAATCTTCCCCTGATTGAACGACCCAAGAACACCTCCCAGGATTTCAAAATAACCGCTTCAATCTCCTGATTGAACGACCCAAGAACACCTCCCAGGATTTCAAAATAACCACTTAGAAAACGAATACAATATGAGATCTACGAACCAATCACTTCCGCAGTATAGTAACAATATAGTAGAGTGAGAGATGATTGGTTTTTGATAATGAAGAACTTTGAAATATAGATCTGAAAATGAAAGCTCTTATTTTTTTCTCTTTGCTTTTTGATTTGAAAGAACGTAGCAGAGAAGTGGAAAGTGGTGTCTGGATTTGTGAATCCAAGCTTCCTATTTATAGGGAATGTAAAAAATTGACCGTTGAAATAAAATAAGTAGAGCAAGAATCGATTATGTGCTCTGATACACTATATGGCATAATCGATTCTTCTCTTAAAAAAGGAATGCATTGTAATCGATTCGTTGTTTAAATAAAGGAGTGAGACAATCGATTGTTTCAAAGGAAGGAAGCTTAAAATCGATTTCATACTCCAATATATTTAGTATATAATCGATTTTAACAAATAAGGAGGGCAATGAATCGATTTCATACTCTCAAAAAGGAAGCCAAGAATCGATTCTTTAGTTTGCTCAAGAAATGCTAGGAATCGATTCTTTTCTTTTTAAGATGACTTGGAAATCGATTGTTTTGCTAATTAGGAAAGGCTTAGGAATCGATTTATCATGTCTCATTGGGAGTTGGAAATCGATTTTATACTCCTATGAGACAATGGAAAATCGATTCTTTCATTTAAAAAACATTTTCCCATGTTGTGTGCCTTTCTCATGCATGCATGCATTTGGCTAAAATATTTTTCAAGACTTTCAACACAACAATTTTATTTTCAAAACATTTTTTAAAAACATCATCTCTCTTCTACTAAATGTCATAAAGCTGGAGGGATAGGATCTTACATTTGAGTCCTATCAAAAACAGATAAACAATTAGGTCTTCAACTTCATTGTTGCTTCTTCTGCAAGCCATTGCACTTTAGTCCCTGCTCTTTGATTTAATCACTGTACCTTCATTCAACTGCAACCATTAGTAGACAAGATGTAATTTGTTATCATTCAAAACAAAGAGTGTTTGTCCTTGGTTCAACAGAGATGTCACCGATTATAAAGAGGATCTCGAGATAAGCAACCCCAATGGATTGGTCTAGTGGAGTATGACATAATATGTATCTATCTGGAAGGTCTCATGTTGATATTCCTACTAGTCCCATTGAAGTTAGATAAATGTTACTCATTAGAGCTCAAAGGTCTTCTTTACCTTAAACTAAGATATTATCCCCTCACCCTAAAATTTCTGTAATCAAAAGAAACTACTACTACTAAAAGATAAGCATTTTTATTTATAAAAAAAAGCATTTTGCACTTCAACGTAGGTACGGGGTATTATAAACCCCACTCCCACCGTGATGGTCCTTGCTTATATTTTACTCAAAGCCACATATCCTCTTTAGCTAGCTCATTCCTTCTAAATTCTATTGAAGGAAATCAACCCCACACACTTCTTTCGTTTTCTGCAAGGTTAAAATATGTTCTTTTTTCTCCATAAAATTAGTGAAGTCTAATCTATCATGATTTTTTATTTATATTTAATAATTTTTAATATTTAAAAATTAGAAAATAGTGTTTTTTAGTTTTTAAAAAGAAACTAAAAGCACACTTGTTTTTTGTTATCAAATGGAAGACCAGAAACAAAAGAAAATAAAAGTACTACAATTTAAATTCATCCGTTAAAGTTTGATAATAGATTATATTTCACGAGCCTATAACATTTTTTACCATTTTTAATTTTAAGTAGAATTTGAACTTACAACTTATAATGTATATTATTTATTCTCTCTCAACCATATTTTTAAATAAATTTCTTGCTTACCCTTAATGGAGAAATATTAAACACACTCTTTAACACTTTTTTTGGGAAGAAAGCTTAAGTAAGCAACAATTAAAACTTTACATCATTTCACTTCATTATTAGTAAAAATTTTAAATTATTAGAAGTAAGTAAATAATTAGAATAAAAAATATGATTAACTATAAAATTATTGCTCGTTTTAAAGAAGTGGAGTTCAAATTCCATGGACTCAACTGAAAACCAGTTTCGTAAATCATAGAAAAGCTAAGGTCAATAAATGCAACGATTAAATAAAAAAAATACTAATATTACTATCACATTAATTTTATGAACGTGATTCCTTTTCCTTGTTTGTTGGGTGAGCGAGGAATAGAGAAAGAGAAGGCTTAGAATAAGCGAATATATATCCTCGTTCATTGTCTCTTCGGCTAGCTCTCCATTCAGCTCTTGGTTCTCCCTCGTTTTCTTCGCTAAACTCTTTTCAATCTCACAAAACAACA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00153.30	Mito_carr	17	93	8.40E-51
PF00153.30	Mito_carr	105	200	8.40E-51
PF00153.30	Mito_carr	209	295	8.40E-51

Gene family

Gene family	Subfamily
Transporter family	MC

Gene Ontology

GO term	Description	Category
GO:0016020	membrane	Cellular Component
GO:0005730	nucleolus	Cellular Component
GO:0003723	RNA binding	Molecular Function
GO:0042254	ribosome biogenesis	Biological Process
GO:1990904	ribonucleoprotein complex	Cellular Component

InterPro

InterPro term	Description
IPR018108	Mitochondrial substrate/solute carrier
IPR023395	Mitochondrial carrier domain superfamily

trEMBL

trEMBL term	Description
A0A8B8KQC8	_

SwissProt

SwissProt term	Description
DTC_ARATH	Mitochondrial dicarboxylate/tricarboxylate transporter DTC

KEGG

KO	Description	Enzyme
K15104	solute carrier family 25 (mitochondrial oxoglutarate transporter), member 11

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G19760	Mitochondrial substrate carrier family protein
Medicago sativa L.	MsG0480023074.01.T01	_
Oryza sativa L.	LOC_Os05g11780.1	mitochondrial carrier protein, putative, expressed
Cucumis sativus L.	Csa020207	_
Glycyrrhiza uralensis Fisch.	Glyur002408s00032639.1	_
Codonopsis lanceolata	Cl_chr08_32500T	_
Arachis hypogaea L.	AH13G54430.1	Mitochondrial dicarboxylate/tricarboxylate transporter DTC like

Expression pattern