Gene detail

Detail information of Am05G029710.1 Annotation

Gene ID	Annotation
Am05G029710.1	Leucine-rich repeat protein kinase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G029710.1	mRNA	Chr05	152106811	152110424	-

Sequences

CDS:

>Am05G029710.1
ATGAGCTCGGTTAACCTTGCGTTGGGCCGAGCTTTAATCCGGAGACTCAACGCTTCCACCTGGTTCCAAACAAAAGTTTTCAAGTTCAATTCAGAAGCTACTCAAATCAGTAAAATAGTACTTCCATCTAAAAATCTAAGCGGAACAATTTCATGGGGTTATCTAAGAAACATGTCCATGTTGCAAGTTATTGATCTCTCTGGGAATTCCCTAGAAGGCCACGTACCAAGCTGGTTTTGGTCTACTCCATCTTTATCGGAAGTGAATCTCTCAAGAAACAGGTTCGGAGGTAGCATTAACATTGATTACTCAGAAAACACCTCGTTTTCAACCATTCAAATGTTGAACCTCTCATACAACAGGTTTGGTAATTCGGTTCAACTTTCTGGTTTCCCAAACCTTAAAATCCTCGACCTTTCTCACAACAACCTAGTAACACTTCCCACCGGGTTCCAAAACCTCACCAACCTACAACACCTTGACCTCTCAAGTTGCAATCTTCACAGCAACATAAAACCCATTTCTTTCCTTCACTCACTTCACTACTTGGACTTATCAAATAACACTTTGACTGGTACTTTCCCTTCTGATTTCCCTTCACTTCAATTCTTGAACATCTCAACAAATAACTTCGCCTATCACAACAACAAATCCAAAACTCACAACCATCAATACCCAACAATAACCCCACCCATTCATCATAAAAAATCCAAACCAAAAAATAAAACAGTGATCATTGTAGTGTGTTGTGCAGTATCAACACTTGTTGTAACTATTCTATGCATTTGGTTAGTCTACAAAAAGAAGAAGAGGAACAAATGGGAAATCTCATTACCGGTCCCACAGGGGATGATGATGAAGATGGAGAAATCAGGGCCGTTCGCTTTTGAGACAGAGTCAGGGTCCACGTGGGTGGCTGACTTGAAGGAACCATCGTCTGCTTCGGTGGTGATGTTCGAGAAGCCATTGATGAATCTAAGCTTCAAGGAACTCATTATTGCCACGTCATACTTTGGGAAGGAGTCGCAGCTGGCGGAGGGAAGGTGTGGGCCCGTGTATAGAGCTGTGCTGCCCGGTGACCTCCACGTGGCAATCAAAGTCCTTGAGCACGCCAGAGACGTTGATTGTGATGACTCTGTCGCTATGTTCGTTGACCTCTCTAAGCTCAAGCACCCCAACTTGTTGCCTCTCTCCGGTTATTGCATTGCAGGTAAGGAGAAGCTAGTACTATACGAGTTTATGGCAAACGGGGATTTAGGGAGGTGGCTACATGGGCTTCCAACAGGGGGAACCAACGTGGAGGACTGGACCGGCGACACGTGGGAGCTTCAAAACAGCGACGTTGATGAATCCCGGGAAAAGATGTGTTGGCTGACACATCACCGTATCACGGTGGGGATAGCGCGTGGCCTCGCGTATCTCCACCACGCGGGGTCAAAACCCGTCGTGCATGGCAACCTCGTTACCTCCAACATTTTACTCGCCGATGATTTCGAGCCCCGAATCTCCGATTTCGGGTTGCGAATCGACCCGATCCCAAATTGTGGCACTGAGGCTGACGTGTATTGCTTCGGAGTGGTGCTGATGGAGTTGCTCACGGGGAGGGAAGGCACGACGGAGAGGGTGGTAGCAGTTAGAAAGGTAGTGAGGGAACAACGGGGTATTACGGTGTTGGATGAGAGGCTGCGGCTCGACGGTGACTCGATGGTGAACGAGATGGTGGAAAGCCTCCGAGTCGCTTTCCTGTGTACGACTGAGTTGCCTTCCAAGAGGCCCATTATGCAGCACGTTTTGGGCTTGCTCAAAGACATTCGTCCTCACCAACAACTCGTCCCGAGTTGA

Protein:

Promoter(3k):

>AM05G029710.1
TCAAAAATAAAATAATAATAAATTGCTTTGGCAATCGTGGTGTTAGTGGGAAACGTGAGACAGTTAATTGTGCACGTGGCACATTCTCGTTGGCACCAGCAAACTCTGTTTTAGCTCAGAAACGTCCCCTCGTATTCTGAAAAAAGATATGCAATGATAGCATGAGATTTCATGGGATAGTCGAAAGAAGTTTCAAAAAGCCGTTTTCTTTTTTCATTCAAGAATTCAGTCGAAAACGTCTTTTTGGGGGGGCAATTTGTTAGCCTGTATTTTCGACAGGCGAATATTAAATGCAGTCAACAGGGTTTGACTTAATAATTTCAGAAAGAAGGCAGGTCTTCGACACCAAGATATAATTTCGACTTCAAGAGGTAGTAACCAAGGGAAAGCAGCCTAATGCATAACTTAGCGAATTTGGAAAAAGAGGCCACACTTCGACAGAGAGAAGATTAACAAGCAAAGCTATGGAGACCTGTCGAATAGGACATTGCTTCCTTGGTCGAAAAGAAAGAGCAGTTAGATAATCGAAGTAGAAGCACGTCGAAGTAGCAGTTATTCTGCCTTATCTTATTTTAGAAAACCGCTGAGCGGTTATAGTCTTATTTGTATTATAAATAGAGGTTCTGTAGAGGGGGAAAAGGGGTCGCAAATCTCATTACACATATTTCCTAAAACACTCTACTTCCGCAAACAGAGAAAACAGAGTCAACAGGAATTCATGTATGATTCTGCGTACCACTTCTTTATATAATTGTTTTTATTTCTTTTAGATTTCTGCACTTTGTCATCTTCTTCACTTACAATTACTGCAATTTACTGCATTTTGATTCCTCTTCCCGCATTTACAAATTCTTGCACTTTATCGTAAGTTTCTGCACTACTATTAAGTATCAACAATTCTTAGTAAAATTTGATCACAAATGGCCTGAGATTCCTAGTTGATCTCGCAAGTAACACGTGTAGTGAAACTAGCGGTGTTTACTAAAAATCACAGTAAACAGTACCGTGGTAAGGTTGCAAGTGGTCATTAGATAAGTTCATACCTTTGAAAGCTTCCCAGTAGATGATGTCTGCTGAGGATCCGGGGTCAATCAGTACTCGTCTGACATTGTAGTTGAGGACTTGAACTACTATAACCAGGGGATCATCTTCGTGTGGGGAGATTCCCGCGAAGTCCTTGGGAGAGAAGGTGAGATCAGGAATGTTGGGTGTCGTGGAACTATCAGATGAACTGCTGATGTGCATGACCTGGCGTACATATCTGCGTCGAGCCGAGCTTGTTTCTCCTCCTCCCGCGAATCCTCCGGAAATGGTGTTGAGAGTGTGTTGCACTGGTGGAACTTCCTCTGCATGCTCTGCCAACGTTACCACTTGGGACTGCAACTTGGGCTTCGGTTGCTCCGGTGTTCTGACACGTGAGTTTCCTGGGTCGTCTTTCACATATTGCTTCAATAAGCCACGTCGGATCAGCTTCTCGATTTCGTTTTTTAGGGCAAAGCAGTTCTCGGTATCATGTCCTCGACCTCGGTGGTATTCGCACCAGCTATCACTGTCTCTGCCTAGGACTCTTCTTGCTGGGTTTAATTCAGGGATTAACCTTGTGTGCAGGACTTCTTTCAAAATCGTCGCACGCCTCTGGTTTAGAGGTGTTAAGGCTCCTCTGACAGGGCTGCTTCGCCGAGGAGGTGGGGATCTTCTCCGAGGTGGTGGCGGAGGATCGCGCCGCTGAGAAACACTTCGGTTATAGTCGTCATATCTGCTGCGACGTTCGTATCCTTTGTCGGGCTGCCTTTCGCGCTCATCCCGGTGCCGCTTCTCGGCATTACTTTCTTCTCCTTTCATGTAGGCCTCTGCTCGGGCTAAGATCTCTTGCATATTAGTTGCAGGCCTGTTTGCTAGTGACTCGTTGAACTGTCCTCCACGCAAACCGTTTGTGAACGCGTCTGCAAATTGCCTCTGACCAGGGTGTTCTACGTCCACAGTGATGTCACTGAATCTTCCCAGGTATTCACGGAGAGTTTCGGTTGGGCGTTGCCGGGTGTTAAACAGTGTAGCAGTGGAGGTCTTTTTGTGTCTTCTATCTGAAAAATGTCTGAGGAACTTCTTGGTGAAGTCGGCGTAAGAAACAACGGACTGCCGAGGAAGGCTCATGAACCATCGTAGCGCCGCGTCTTTCATGGTACCGGAGAAAAGTTTACACTTGAGTGTTTCATGCGCTCCAATGATGGCCATCTGGGTGTCAAATGCGGTTAGGTGTTCCTGGGGATCTCGGCGTCCATCATATGGCTCCAAGGGTGGCGGCTTGAAGTTCTGGGGAACTAAGTCGTTCATTATGGCATCTGTGAATGGTTGGGGTTTTTCCAGTTGGACTCTATCAAGCGAGTTAGGGTCTCTTTCTTGCTTCATGTCATCAACTTGCTGTTGTAGGGACTGGTTCTGCTTCCGTAGTTCATCAAGGACTGCGTTGACGCCAACCATGAATGGGTGCTCAGGTATCGCAGCCTGATTTGGTTGAAGAATTGCTTGTTGTTCTTCAGTAACTGTTTGGGTGGTTGCAGCGTTGGCTGCTTGAGTAACTAGTGCTTGAATTGTCTCCGGTGTGGCGGGATTCGGTGTATGCGGTTCGGCTTGCGAAGCTTGAGTTCTGCGAGGGGGGGATAGCGGCGGTTGACGCCGGCGTCCGCGACGGGTAGTTACCATGGCTTGGGAAAATGAAGGTGTGGCCGGGATTAGATTTACCGGGCCCCACGGTGGGCGCCAAATGTTCTAGGATATTTATGATCAAGTCGGTTGTTACAAGTATGAAGAAAAGAAAGAATGGCCTCCTTTCTTCTCTGGCCTAGAGTTCTATATATAGTCTTCAAGGCTTCTCGGTAGTTCTCTTTTGAGGCCTGTTCTCAGCGGTTACCCCCCCACTCCAGTCGTGCGAGTTCCCACGTCCTCTCCTTCCTGTGACACCTGTCCTTGATAGCTCTTTGGCAGTTAACTTCTCGTGTGCGC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF07714.20	PK_Tyr_Ser-Thr	341	508	2.90E-26
PF13855.9	LRR_8	43	95	2.20E-21
PF13855.9	LRR_8	112	167	2.20E-21
PF00069.28	Pkinase	340	507	7.70E-17
PF12799.10	LRR_4	132	174	1.20E-15

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.Other:RLK-Pelle_LRR-VII-2

Gene Ontology

GO term	Description	Category
GO:0009793	embryo development ending in seed dormancy	Biological Process
GO:0006952	defense response	Biological Process
GO:0009733	response to auxin	Biological Process
GO:0006970	response to osmotic stress	Biological Process
GO:0005516	calmodulin binding	Molecular Function

InterPro

InterPro term	Description
IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR011009	Protein kinase-like domain superfamily
IPR000719	Protein kinase domain
IPR003591	Leucine-rich repeat, typical subtype
IPR032675	Leucine-rich repeat domain superfamily
IPR001611	Leucine-rich repeat

trEMBL

trEMBL term	Description
A0A8B8KX31	_

SwissProt

SwissProt term	Description
CARLK_ARATH	Calmodulin-binding receptor kinase CaMRLK

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G45800	Leucine-rich repeat protein kinase family protein
Medicago sativa L.	MsG0480022873.01.T05	_
Oryza sativa L.	LOC_Os08g17410.1	BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed
Cucumis sativus L.	Csa020991	_
Glycyrrhiza uralensis Fisch.	Glyur000717s00025338.1	_
Codonopsis lanceolata	Cl_chr03_05240T	_
Arachis hypogaea L.	AH10G01500.1	Uncharacterized protein like

Expression pattern