Gene detail

Detail information of Am05G029580.1 Annotation

Gene ID	Annotation
Am05G029580.1	NAD(P)-binding Rossmann-fold superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G029580.1	mRNA	Chr05	151772980	151786258	+

Sequences

CDS:

>Am05G029580.1
ATGGAATGGTGCTCCACAACTCTCGCATCACCTGCTTCCACTATTCTTCTCAATTTTCAGGACCATAAATTGCCTAGGAGGAAGTTCTTTAAGAAACCTTCAAACCCTTTTTTGGCATCACCAACACTGCATAAACCATTTCTTCAAAAGATTTATGGTACACCTCCTCAGACATTAATTTATGAACGAGCCTCAACTAGAATCTCTTCTGGAACATATAGAACGGTGATATCAGCTGAAGCTGGAAGACAAAGTTGGGATTTTGGAAGGTTTATAAAAACACTTTATTTCTTCAATGGACCCCCATCTCCTGCTAAGTTCTTTGACTTTCTAGTTGAGAAACTATCCGATCCTTCCCCAAGCAAATCAGTTAACTCAATGGGAACTTCTGATATTGTTCTGGTAGCTGGAGCTACCGGTGGTGTTGGTCGAAGAGTGGTTGACATATTACGACAGAAAGGAATTCCAGTTCGAGCATTGGTTAGAAATGAAGAGAAGGCAAGAAAGATGTTGGGATCAGATGTTGACTTGGTTGTTGGAGACATTACAAAAGATAGTACTTTGATCCCTGAATACTTTAAAGGGGTGAAGAAAGTGATCAATGCTGTTTCTGTCATTGTTGGCCCTAAGGAAGGCGACACTCCTGACAGAGCAAAATACAGCCAAGGAATTAAGTTCTTTGAGCCAGAGATAAAAGGTGATTCACCAGAAAAGGTAGAGTACATAGGAATGAGAAATTTGATCAAGGCTGTGAAGAACAACCTTGGACTTCGAAAGGGAAAGCTACTATTTGGATTTGAAGCCGAAGCCGATAATTATAGGCAGCTTTCTTGGGGTGCTTTAGATGATGTGGTAATGGGTGGAGTTAGTGAAAGTTCTTTTCAAATTGACCCAAGGGGTAGTGAAAGTGGTGGACCAACCGGGGTTTTTAAAGGTGTGGTTTTGACGGCAAATAATGGTGGCTTTACAAGTATCAGAACAAAGAATTTTTCAGAACCTGAGGATCTTTCTGCATATGATGGTTTGGAATTCCGTCTAAAAGGTGATGGGCGTAGATATAAAGTCATTGTTCGCACAAGCCCCGATTGGGATGCTCTTGGGTATACTGGAGGCATTGACACAGAGAAAGGAAAATGGCAATCGATTCGATTGCCATTTTCTTCCCTGAGGCCTGTATTTAGAGCAAGAACTGTGGCTGATGCTCCACCGTTTGATCCAAGCAAGATTGTATCATTGCAGCTCATGTTCAGCAAGTTTGAATATGATGGTAAATTAAATGCAACTTTTGTGGAAGGTCCATTTGAGCTTCCTGTATCTAGCATAAGGGCATATATAAAGGACCCAATAACGCCTAGATTTGTACATGTGGGCTCAGCTGGAGTTACCAGGCCAGAAAGGCCTGGACTTGATCTAAGCAAACAGCCTCCTGCCGTTCGACTAAACAAGGAACTTGATTATATCCTGACATTTAAACTAAAGGGTGAGGATTTAGTTCGAGAAAGTGGCATTCCCTATGTAATCGTGAGGCCTTGTGCATTGACTGAGGAACCTGCTGGAGCCGATCTTATATTCGATCAAGGAGATAATATTACGGGTAAAATATCAAGGGAAGAGATTGCTCGTATGTGCGTAGCTGCACTTGAAAGCCCTTATGCATGTGACAAAACATTTGAGGTCAAAAGTGTTGTTCCATTTAGCGAGCCATTTACTGTGGATCCAGCAAATCCTCCTCCAGAAAAGGACTATGACATATACTTTAAAAATCTAAAAGAAGGTATCACTGGGAAGGAAGCCCTCCAAGAAAGTCCTTTGCCCGTTTAA

Protein:

Promoter(3k):

>AM05G029580.1
GGGATGACTATCACTCTTGATGATGTGTTCTCTTTGCTCCACATCCCCGATATGGGTACTTTTTATAATATGCTGGACTACAGCAAGGACGAAGGAGAGCAGATGTTGATTGATTACTTGGGTGCAGACCCTCTTGAGGCACACCACCAGGCACATGGCAGAGGGTTATCTGTGACCCTCATGTGGCTGAGGAACGTGGTCTATGAGAGAGCTATAGCTGAGGAGCGATGGCAGGATGCTGCTAGGGCATATCTTCTATACTTATTGGGCTTCACCTTGTTCGCCGACAAGTCAAGGAACAAGGTGAAGTTGGGCTATCTGGGAGCTCTGATTGACTTGGAGGATGTTGGTTCTTACACATGGGGAGGGATGGACCTGACCCATCTATATGACCATCTTATGTCACTCTCCCTCTTGGCGAACCTTCCTCTCTGCCTTTTTCTTCAACTGCCTGAATGTTATATTCTTATCCAACCTACAGAAGATAGGATTGCGAGAACGAAAAAACACACCATCGTGCCTGTTGGTGACCGTTCCACGGTGATGCAGGACGGTTAGGAATTTGTCACTTGATCTCTGGGTTGGGCACAGCTGCCATTCCATTAGGTCTTCCATTACAGCGGGTGTTGGTGGAGAAGAAGCAGAGAAGGGGTGTTGGTGGAGAAGAAGAAGCAGAGAAGGGGTTAGGGTTTTTGTGAAGTAGCAGGGAAAGCTGAAACCCTATTTATAATAGGCGTGGGGAAATATGAACCGTTGATCAAAATTTTAGATCACAAATCTGAGCCGTTTAAGTTCTATCCGTTGGGGCACAATTTCCAAAGTAAATGCCATCTACTCCTTTTTCTGACACGTTTGACTGTTTGTAAGTCGTTGATCAAAAGTGTCGGTGGAATCTGAGCTGTTAAAAATTAAAAAAAACACAACACCTGTTCGGGTGCCCTGGTCCGAACACGTTCGGTTGGGGCCATCCGTACCTGTAAAAATTCAAAAAGGGGTGTGTGTCAACAAATTGCACGTTAGTGTGACTCATTTACAAGGTAATTTTAGTAGAGTAGTGTTTGTATAAATTTAAAAATTTAGTTAAAAAAAACTAAAGTGAAGTGATAAGAGAATAAAAGAATTGTTTATGGAAAAAGTAAAAGTAAAGTAAAAAGAAAAAAGGAAGAAAGAGAGTGTAAGAGAAAAGTGAAAAGGAGAAAAGAGAGTGTAGGAACAAAGAGAAAAAAAATAAGAAAGAAAGTGTTAGAAGTAAAAAAAAGAAAGAGAGGGTAATGACACTTTTACCCTTAAATTATATATGTGTCATGTTAATAAGAGATCCAAACTGGTAATTTCATAGGAGATTTGTTTGTATAAATAGATAAATAGATAAATAAAAGAGATCCAAATTGGTAATTTCTATGAAGCCCAGATACTTCAAAAATGGAGACGTACCCGTGTCGGATACGTATCCGATACCGATACGCACCTGATACTTCTCGATACGTACCCAAAGAGTATCTAATAATTTTTTAATTCTTTTTAAAAAATATTTGACTCGATACTTTTCAGATACATCTTTGATACTTCTTACCAACTAAGGATACTTCTCAGATACTTTTTCGATACCTCTTACCAACTAAGGACATGATTGTCACTCATATATGATACACTTTAATACCTCAATAACTAAAAGACAAAATTATATGTTTTTTCGTAATACAATAATAGAAGAAATAATACATTGTGATATGAGTGGGATAAATATACGTAACTATCTCTACTTGATAAGATCACAAGTATTTATTTCTACAATGTGATGAATATATATTGACTAATGATATGCTTATGTTTTATTGACTAATTACGTACTAATATGAATATCTTAGTCTATAAAAAGTCATCTATTTCTGCCACTGACTATTCGTATTATACGATTTCGGGTGGTCTCAGTTACTTGTCCATCATTACTTTTTATGACTAGTCACTCATACATAGGTGTGTCGGTTGTCCTCTTCCTTTCATCCATATATTTTGTGTGATTTTTTTAACTATTTGGACAGTTTTTTTTTCATATCTATAAAATGCAATATTTCAGTTTTTCATCTTTGTTTTTTTCTATTTGTGTTTCTATTCTATTTTATTTTTTATGTTTTTATATATTTAAATTTTAATTTAATTTTTTATTAAAGTATCCCAGCCGTGTCGTATCTTGATTTTCAAAATTTTCCCGTATCTCCGTATCCGTATCGTGTCGTATCCCGTATCGTATCCGGTATCTAGGCTTCATAGGGTAATTTCATAGGAGATTTGTTTGTATAAATAAATAAATAGATATTAGATAGATCAAAGTAGACTTAAATATGTTTTAGACCCCTGCAAATATAGGCTGTTTTGGTTTAAGCCCCTGCAATTTGTTTTTTTTGTTAAAAGCCCTTGCAAAATGACATATTTTGTTATAAGCCCTTCTATGACTAAAATGTTAGCCTATAACATGGAATGCTATGATTGCTGGATATGTTGAGAATGGCTTATAACAAAATATTTCATTTTGCAAGGACTTTTAACAAAAAAATTTTTTTGCAGGAACTTAAACCAAAACACCCTGTATTTGGAGGGCAAAAAAAACATGTTTAACCCATTAAAGTATTCACCGTTGTTATGTTCACTTGTCTCCCTCATTGTTTGTTGTTGATTTTAGGTGATGATGTAAGAAAACTTCATCTCCTCGCTTAAGTCGCTCGTACCTTGGTAGGAAAAATAAGCAGCTATTTATTTAGATGTGTATACTTATCGATTGATACCAACAGCCAGCGTTTGTAGTCCAACGGTTAGGATAATTGCCTTCCAAGCAATAGACCCGGGTTCGACTCCCGGCAAACGCATTTTTATTTATTTTTTGGAACGAAAAATTGTGGCGTGTTTGTGGTTGATATGAATCTTGCACTGCAAATATCACCGCAACCGTAACTTGAGCTCTCTATAGAGCTTATTCCCACAACACACAAAATTAATTCCCCA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF08547.15	CIA30	274	438	9.00E-41
PF13460.9	NAD_binding_10	137	253	1.10E-27
PF13460.9	NAD_binding_10	451	550	1.10E-27
PF05368.16	NmrA	133	204	4.60E-10

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0010257	NADH dehydrogenase complex assembly	Biological Process
GO:0051082	unfolded protein binding	Molecular Function
GO:0009570	chloroplast stroma	Cellular Component

InterPro

InterPro term	Description
IPR013857	NADH:ubiquinone oxidoreductase intermediate-associated protein 30
IPR036291	NAD(P)-binding domain superfamily
IPR016040	NAD(P)-binding domain
IPR008979	Galactose-binding-like domain superfamily

trEMBL

trEMBL term	Description
K7KQJ6	_

SwissProt

SwissProt term	Description
HC173_ARATH	Protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic

KEGG

KO	Description	Enzyme
K18159	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G18810	NAD(P)-binding Rossmann-fold superfamily protein
Medicago sativa L.	MsG0480023104.01.T01	_
Oryza sativa L.	LOC_Os02g13970.2	Complex I intermediate-associated protein 30 domain containing protein, putative, expressed
Cucumis sativus L.	Csa008782	_
Glycyrrhiza uralensis Fisch.	Glyur000420s00021421.1	_
Codonopsis lanceolata	Cl_chr03_06890T	_
Arachis hypogaea L.	AH13G54040.3	Uncharacterized protein C9E9.15 like

Expression pattern