| Gene ID | Annotation |
|---|---|
| Am05G029320.1 | RNA ligase/cyclic nucleotide phosphodiesterase family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G029320.1 | mRNA | Chr05 | 151212136 | 151213854 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF07823.14 | CPDase | 16 | 152 | 2.50E-13 |
| PF13563.9 | 2_5_RNA_ligase2 | 42 | 170 | 4.00E-13 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0004112 | cyclic-nucleotide phosphodiesterase activity | Molecular Function |
| GO:0009187 | cyclic nucleotide metabolic process | Biological Process |
| GO:0016020 | membrane | Cellular Component |
| GO:0016874 | ligase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR009097 | Cyclic phosphodiesterase |
| IPR012386 | 2',3'-cyclic-nucleotide 3'-phosphodiesterase |
| trEMBL term | Description |
|---|---|
| A0A1S2YG06 | _ |
| SwissProt term | Description |
|---|---|
| CPD_ARATH | Cyclic phosphodiesterase |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT4G18930 | RNA ligase/cyclic nucleotide phosphodiesterase family protein |
| Medicago sativa L. | MsG0480023136.01.T01 | _ |
| Oryza sativa L. | LOC_Os05g44170.1 | cyclic phosphodiesterase, putative, expressed |
| Cucumis sativus L. | Csa000679 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur001131s00029291.1 | _ |
| Codonopsis lanceolata | Cl_chr08_06640T | _ |
| Arachis hypogaea L. | AH13G53810.1 | Cyclic phosphodiesterase like |