Gene detail

Detail information of Am05G029310.1 Annotation

Gene ID	Annotation
Am05G029310.1	K-box region and MADS-box transcription factor family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G029310.1	mRNA	Chr05	151182923	151187678	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM05G029310.1
ATCATTGGGACAAGCGTGTATCTTCTCATAGTTCAAGCTAATGGTGCCTAACATTTTTTTTTGCATCATACGCCCGAGAAGGGAGAGCATTATCCTTCGGCAACCTATCTTTAATTAGTGCGAGTAATTCCGTAAAGCTCTTATCCGTCCATCCGTGGCAAGTTTTCAAGTTATACAACTTTATCACAGCCAATAATTTTGTGAACTCAGTACAACCCGCATACAACGGTGTCTCCGCATCGGTTATCAACTTCTCAAACCTTTGAGGACAATCATTAAGAACATCTTCAACCGCCTTTGTCATCTCTTCAAATTGGTCGCCATCAAATGTATATTTTTTGGTGTCAACCGGCGCACATCTCTCAGTACTATTATTCATATTTGAAGATTCACCTCTTTCCTCACCGTGCATTGTCCAACAAGTATAACTTTGATCGATTCTGTAGGCCTTTAAATGTCCTGCCAGCTCAACTGCAGTAACTGGGTTTACATAACAACACCGTAAACAAGGACATTTGATATTACTAGAAGTTCCCAATCGTCGAACAGCAAAGTTAACAAAATATTCTACTCCATCGACATATTCCTTCGACAGACGATTTGCAGACATCCACTTTCGATCCATATTTAACCAAAATTGATAATAAAATCCTGATAGAGAACTTAAATATGTTATAGGTGAAAAACACACAAAGTACAATTTTTTGAACCTAAGACATTGGACTTTGTTATATTATCGTTTAAGAGAACTTAAAAGTTAAAAGATTCCCAACAAAATAATAAACAAAAATCAAAGTAGCCATTTTCAAACAACCTAAAATTTGTCATAATCATGCACATTTCAAAGTTCAGACTTCAAAGAACACAAATCACACACACACACACACACACACACACACACACACACACACACACACACACACACTTGTCACATAGCAGCACAATTTCATTTTAATCCAAATTCTAGTATATAATAAAATGTATCAGTTTAGCATTTTACTTTTGGTTAACATTATCATGCTTAAGAAAACAAATTTTAATTATAAGTGTTGTTGTTACCTGAAATATGGAGCTCAAACACACTATCTCTCCTCTTCGTATCTCTCCCCTACGGCGTGGACAACAGCGTCGTCGTTGGCGAGGAGTGCGTATATCGTCGGCGAGAACCTCAAACACGACTGTCACGGTCACGGTCAGAATCACTTCTATGCATCCACGGGAAGAAACCACAGCCAAATCACTCGATGCTATACGAGGAAGAAGACGAGTTATTGTTGCTGCGGTTACTAAGCGCGGTACTGAGTTAACTAAGTGAAGGTATGTTACCTTTTTCGCCTTCCAAAAGTTGCTTAATGTTGGTGATTTTTCACTTCAATGGTTGCATTTTTCGTTCCTTTTAGATAATTTTATGGAATGCTATTTTTTAGGCCAACTCAGTTCAGTATTAGGGTTAGCTTCTAGGGTTTCAAAATAGGGAAATTAGGGTTTTTTTTTATAAGCAATTTTTTTTTATAAAAGGGGGTGCAAGCGGGCACCTCAACCGTTACATCTACAAGGGGACTCATTAAAACCTCTGGGGAAAAAGACCCAAGGAGGAGAAAGAGTACCTCGGGAAGAAAGAGGCATAAATTCAATTACACCAAGTTCATACAATCCAAATGATTACCCCACCAATCCGACATCTTAAAAGTAGAATTGCGGCCTTCTATATTTATGAACCGGGTCCATGTTATGGACTTAACATGATTATTATCGGTTGTTTTGAGTTTGTTTATGTTATTTAGATCATTTTATGCAAGATAAATATATCAAGCCTTTTTTTACTTTATAAAAACAAATGACAAACATAATTAATTAGTAAGATAAATTAAAACTCAATTTTCTTTAAAGATAACTCTATAGTTTCTTGATTTTCATATATTATCTTTTGGATTTTACTCTTAAAGTAAAGTCTACAAAATACTATTTTTACACACAAGATGCCCATCAATCAATTACAATAATGCATAAAAGCTAGCTAGGTCTAGAACGAAATATGCCCAGGATCTACACAAAAGGAAAAGAGGTTGTTTTGAATTTATACTGTGAAAATACCACTTGCGCTAAGTTTTGCAACTTTGCTCAAAGTCATTTTCACCCCATTAATAATCGTTTTCAGACCCCTCTCTCTCTCGTGCCCTACTCCATTCACTCCTCGTGAAAAGAAAAAGAAATTGAGGTTGGTTTTATTTCCAGCTTTATCCTTCTCTTTTGATTCTGATCATCATACCACTCAACCAGTGGGGCTAGTGGGAAAGAAAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGAAAGACAAAGAAAAGTAAAAGAAAGAAATTTATATATAGAGATGCAGCTAGATGAGTATGCTGCTTGAAATTCATAAACCATCATAGATTGAAAGGTGGTTTTTCAGTTTATAAATACCCTTCTTTGGTCACTTTTCTTTCATTTTCTAATATCTCCTTCCTTCCTTACTAAGTGGAAAAGAAGGGAGAAAATATATATATATATTTACATCAACCTGTGTTGCTGTACTAAATACATCAATTCTCTCTCTCCATTTTGTTTCCTCACCAGTCACAAGGTTAGTGAAACATCATTTGTAATCCTCTCTCAATGCTTCCCCTCTTTTAGGGGAAAGATCAAACCTTTTCACTTGAAAACCAAGATTTGGAAACACCAAAAACTGCTAGTCTCTAAACTATTACAAGAAAATGAAATTTGTAGCTAATTAGCCAGTGATTAAATGCTAAGCTTTTCCAAGTTTCCATTTTTTTTGCTTTCCCTTTTCCTTTTAAGACTCTTCCTAACTAATCAAACGAAACTAGCTGAAAAAATACCAGAATTTTCACTCATGATTTTTGTTCAGATGTATCTTTTTTTTAGTGAGGAAAAATTTATTGATGATCTTTTACTTGATTCAGCTAGGAAACC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00319.21	SRF-TF	25	72	9.30E-27
PF01486.20	K-box	98	186	8.00E-26

Gene family

Gene family	Subfamily
Transcription Factors Family	Others

Gene Ontology

GO term	Description	Category
GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Molecular Function
GO:0005634	nucleus	Cellular Component
GO:0046983	protein dimerization activity	Molecular Function
GO:0003700	DNA-binding transcription factor activity	Molecular Function
GO:0000987	cis-regulatory region sequence-specific DNA binding	Molecular Function

InterPro

InterPro term	Description
IPR036879	Transcription factor, MADS-box superfamily
IPR002100	Transcription factor, MADS-box
IPR002487	Transcription factor, K-box
IPR033896	MADS MEF2-like

trEMBL

trEMBL term	Description
G0ZMZ1	_

SwissProt

SwissProt term	Description
AG_TOBAC	Floral homeotic protein AGAMOUS

KEGG

KO	Description	Enzyme
K09264	MADS-box transcription factor, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G18960	K-box region and MADS-box transcription factor family protein
Medicago sativa L.	MsG0380013711.01.T01	_
Oryza sativa L.	LOC_Os01g10504.1	OsMADS3 - MADS-box family gene with MIKCc type-box, expressed
Cucumis sativus L.	Csa017355	_
Glycyrrhiza uralensis Fisch.	Glyur000145s00010150.1	_
Codonopsis lanceolata	Cl_chr03_07980T	_
Arachis hypogaea L.	AH10G00840.2	Floral homeotic protein AGAMOUS like

Expression pattern