| Gene ID | Annotation |
|---|---|
| Am05G029220.1 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G029220.1 | mRNA | Chr05 | 150957282 | 150983078 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0000395 | mRNA 5'-splice site recognition | Biological Process |
| GO:0071004 | U2-type prespliceosome | Cellular Component |
| GO:0005685 | U1 snRNP | Cellular Component |
| GO:0005509 | calcium ion binding | Molecular Function |
| GO:0016020 | membrane | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR003107 | HAT (Half-A-TPR) repeat |
| trEMBL term | Description |
|---|---|
| A0A1S2YFZ6 | _ |
| SwissProt term | Description |
|---|---|
| PR39A_ARATH | Pre-mRNA-processing factor 39-1 |
| KO | Description | Enzyme |
|---|---|---|
| K13217 | pre-mRNA-processing factor 39 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G04080 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Medicago sativa L. | MsG0780040793.01.T01 | _ |
| Oryza sativa L. | LOC_Os08g29124.1 | expressed protein |
| Cucumis sativus L. | Csa017325 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000010s00000950.1 | _ |
| Codonopsis lanceolata | Cl_chr03_09490T | _ |
| Arachis hypogaea L. | AH13G53670.2 | Pre-mRNA-processing factor 39 like |