Gene detail

Detail information of Am05G028980.1 Annotation

Gene ID	Annotation
Am05G028980.1	Protein kinase superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G028980.1	mRNA	Chr05	150597826	150604977	-

Sequences

CDS:

>Am05G028980.1
ATGCAAAGTCAGGTGACAGCAACAGTGAAGCAAAGGAATGATCATAATAGTAAGTTACCATCAAATCCAGAAGAAGTAGAAGATCTGCGGCGTGATCATACAGATACAAATACAAATCCATTGATAGCATTCACTTATGATGAGCTAAAGACAATCACTGGAAATTTTAGACCAGATCGTGTGTTAGGTGAAGGAGGATTTGGAAGTGTTTATAAAGGGTTTATTTCTGAGGAATTAAGAGAAGGACTTTCTTCTCTTTCTGTAGCTGTTAAGGTTCATGATAGTGATAACAGTCATCAAGGCCACAGAGAATGGCTGGCAGAAGTAATATTTTTGGGGCAGCTTTCACATCCAAATCTGGTGAAATTAATTGGTTACTGCTGTGAAGATCAGCATAGAGTGTTAATTTATGAGTATATGGCCAGGGGAAGTGTAGAAAACAACTTGTTCTCAAAAATTTTGCTTCCCATGCCATGGTCCATAAGAATGAAGATTGCATTTGGTGCTGCAAAGGGACTTGCATTTCTTCACGATGCTGAGAAACCCGTCATCTATCGTGATTTTAAGACATCAAATATTTTATTGGACCTGGACTATAATGCAAAGCTTTCTGACTTTGGCCTTGCTAAAGATGGACCGGTTGGAGACAAGTCCCATGTTTCTACTCGAATCATGGGAACATATGGTTATGCTGCACCTGAATACATTATGACAGGTCATCTGACTCCTAGAAGTGATGTTTATAGTTTTGGAGTTGTTCTTCTAGAACTTCTAACAGGAAGAAAATCTTTAGACAAGTTAAGACCAGCTAGAGAGCAGAATCTAACAGATTGGGCTCTTCCTTTGATAAAAGAAAAGAAGAAACTGCTAAATATTATAGATCCAAGACTGGAAAGTGATTATCCAATAAAAGGAGTTCACAGGGCTGCAATGCTTGCTTATCATTGCCTCAACAAAAATCCAAAAGCAAGGCCATTAATGCGAGATATTGTAGATTCACTAGAGCCTTTGACTGCATACAGTGAAATCTCTATTGAAACATTGACCATAATCAATGATGTTCCTGTAACTGATGTGAAAAAGAAGGATGCTGAATAA

Protein:

Promoter(3k):

>AM05G028980.1
CAATGCCACAAATGACTGAGGTTATCCAACTCTGTCTTCAAACATGAAGGCAGAATAATGTTAACCTGCTGATTGGGGTTATCCTGCTCTGTCTTCAAACATGAAGGAAGAATAGTGTTAACCTGTCCAGTTATGATGAACATTCTGTTGTTGCTCATTTGCTGGTGATGATCAAGTCTCCTTTCTCCTTATGATAAACTTTGCATTTGTCATCCATGAATACTATAGCAAGGTTTCTTTGCTGCAATTGTCCAATGCTAATGAGGTTACTCTTCAATTCAGGGATAAAGAATACATCTGAGATGACTAATATTCTTCCCTGAATCCTTATCTTTATACTTCCCTTGCCTTTGACTGTCAATCTTGATCCATTTCCTAATTTTACAGAATTAGTGAATGTTTCATCAAGATTGAAGAACCAATGTTTATGGCCACACATATGGTTGCTGCAACCCGAATCAAGAAACCATAGGCTGTCACTATCTTCAACATCCGAATCTCCTCCAATGGCCATCAGCAGCATTTCTTCTTCCTCATCAAATTTTGCAAAGTTTGCATTTTCTTCCCAAGATGGACATTCATGTTGAAAATGTCCCAACTTCTTGCATTTGTAACATTCCATGAACTCCTTGCCAGAACTTCTTCCTCTACCTCTACCACGACCTCTTCCTCTGCCTCTTCCCCTAGACCTTCCACTGTTAGTGACTTTGAGGGCTTGCTCCTCTTCTTTCTTACCCTTCATTCTTTTCTCATGAACCAGTAGTTTCCCATGTAGCTCTTCTACAGACATTGTGGTGACATCATTTGACTCGTCTATGGCACACACTACATACTCAAATCTTTCAGTCATGGACCTCAAAATCTTCTCAACTATCTTAAGTTGTTCCATCGTCTCACTGTGGGTTACCATCTTATTTACAATAGCTAGGGTTCTTGACATGTATTCATCAACAATCTCACCTTCTTTCATTTTTAACGATTCAAACTCTTGCCTCAACGCTTGCAAGTGAGACCGTTTGACTTTCATTGATCCCTGATACTTCCTCTTCATTGCGTCCCAGATCTCCTTGGCGGTGTTCTTTACCATGATCGTCTCAATGATTGTGCGATCAATCGCCTGAAACAAGTAGTTCTTTGCTTTTAGATCCTTCAATTTGGCATCTTCAATGGCTTTCAACTGTTCGGGCGTGGATTCTGTTGTTGCAATTGGAATTCCAGATTCCACCACGAACCAGTACTCCTTCGATCGAAGAAGGTTTTCCATGAGTAATGCCCAATGGTCACAGTGACCATCAAACCTGGGAACGGAAGGTTGCAGGAATTCACGCTCGTTTCTTTCTGCCATTTTCTTCTTCGCTGATGTTCGCAATCTAGGGTTCTTTTCTCTCACACGAAAAACTGCAGTTTCAATGGATCAGGCTCCCTAAGGAGCTCTGATACCAGTTGTTAGGAACTGGTAGAGAAAGAAGAGGATTGTAAACTCTCTGATTTTCATTCATGTTGTGAGATACAACTTATAGCAAGAATTACAAACAGAATAGTAACTAATTGTTACTTACAAGAGGTAAGTCAGTTACTGACAACAAATTTACTAACTAATCATTACAACAAACTCAATTAAGCCTAACAAATAGTGGTTAAGCACTTAACTAACAAAATGCGAGTCTAACAATTTGCTTAAGAATTATGTGACTATGGTTTCATCCTCCACCTGTTTTTACTGATTTCACACCAAAGTTAGAGGTTAATAAAACATATCAGAGATTTTTTTTCTTAACAATTGCAAGAGGGAAGAACATTGGTGACTCAATTCGTGCAATTCAATGTTAATCGTAGGACTCACTTAACATATATAATCGTAGAACCTAGGTGGTACAACCATATCAATTACCCACCAATAACAATAAGGACTTCGATTATATATTTATCATATAGATTATTCTATCTTGGCATATAGATAAACGAATATCTACTAAGGGGTTCACTTTAATAAAAAAAAATTAAAGCAAAATAATTATTTTAACACAATAATTTGTAGACTTTTTCTCTTGCATTTATATATAAAAGTCATGAGTCGAAGACTCGAAGTGCTTCTTCTTGTTTTATCCATTTTTATTGGTCTAGGACAAAAAGTTGAAAGAAATATTTTAAGGAAGAAACATAAAGATTAAAGAAAGGAGAATTAAAATAAGAAAAATAAAGCAACAATGGTTAGGTACGGTGGCTGCAAGTTTCCTCCCAATAGAGCAAAATAATTGGAGAGAAGTGAGAACATTGACAAAAAGAAGAGAATATAGGCAAAGCTGAAAGTGAATGTTTTGAAAATCAGATATGACATCGAAATAGCGAGACCACTTGGTTATAGTTCAATTGTTTTAAACCGCTCAAATAGGAATGAAGCTGTGTGGAACCGCTAAAATAATCGAAAAGTAGATAATATCAGTTCATAGTTTAATCAGTTGAACGGTTGAATTGAATCGAATGGAGAGTGATGGAAAAATATTGGTGGGTATGAAAGTGCACACCATATATGCGCACTAACATGAAAGTGCACTCACAAAGCCACATTTTGAATCACTACAAACACATATACACATATGTGGGGTCCATTCCATCCATGATCTTTCCTCCATAGCTAAGCCAACAAAGAGCTATCTATCAACCAACTCATCAAATACTCAATACCCATCATTGCCATCACTGAATTATCTTCCACTCTTCTTTCCTTTCTTTCTCCCATTCACACTATTGCTCTCAATGAATCCCTTTCATCACACTAACAATTAGAATTCTTCCCTTCCTTTTTATTTATTTTTTTTCCTTTGTTGTCTAATAAAATCTAAACCATGTGTTTTGAGGGAGAGAAAAAGAAGTTTTTGTGATGGGGTGTTTGTAAAGGAGATAGTGCAAGCAAGGGAACTTCAAAAGCTGTTTTTGGTTTTGGAAAAATGGGTAATTGTTGGTGTAGGTGTGAATCATCAGATTATAAAGTCTCTTCTA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF07714.20	PK_Tyr_Ser-Thr	59	334	7.30E-47
PF00069.28	Pkinase	59	332	8.10E-44

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.2.2:RLK-Pelle_RLCK-VIIa-2

Gene Ontology

GO term	Description	Category
GO:0004674	protein serine/threonine kinase activity	Molecular Function
GO:0005886	plasma membrane	Cellular Component
GO:0005524	ATP binding	Molecular Function
GO:0046872	metal ion binding	Molecular Function

InterPro

InterPro term	Description
IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain

trEMBL

trEMBL term	Description
A0A1S3UW02	_

SwissProt

SwissProt term	Description
PBL16_ARATH	Probable serine/threonine-protein kinase PBL16

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G56460	Protein kinase superfamily protein
Medicago sativa L.	MsG0080047909.01.T01	_
Oryza sativa L.	LOC_Os03g06330.1	tyrosine protein kinase domain containing protein, putative, expressed
Cucumis sativus L.	Csa013003	_
Glycyrrhiza uralensis Fisch.	Glyur000010s00000981.1	_
Codonopsis lanceolata	Cl_chr08_32270T	_
Arachis hypogaea L.	AH03G34740.1	Uncharacterized protein like

Expression pattern