| Gene ID | Annotation |
|---|---|
| Am05G028770.1 | Transducin/WD40 repeat-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G028770.1 | mRNA | Chr05 | 150241918 | 150245132 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF12265.11 | CAF1C_H4-bd | 21 | 90 | 3.60E-28 |
| PF00400.35 | WD40 | 266 | 304 | 1.50E-24 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | DWD |
| Epigenetic Regulators | NFC1 |
| GO term | Description | Category |
|---|---|---|
| GO:0006338 | chromatin remodeling | Biological Process |
| GO:0005634 | nucleus | Cellular Component |
| GO:0031491 | nucleosome binding | Molecular Function |
| GO:0006355 | regulation of DNA-templated transcription | Biological Process |
| GO:0004402 | histone acetyltransferase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR019775 | WD40 repeat, conserved site |
| IPR001680 | WD40 repeat |
| IPR022052 | Histone-binding protein RBBP4, N-terminal |
| IPR020472 | G-protein beta WD-40 repeat |
| trEMBL term | Description |
|---|---|
| A0A4D6L5P1 | _ |
| SwissProt term | Description |
|---|---|
| MSI1_SOLLC | WD-40 repeat-containing protein MSI1 |
| KO | Description | Enzyme |
|---|---|---|
| K10752 | histone-binding protein RBBP4 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G58230 | Transducin/WD40 repeat-like superfamily protein |
| Medicago sativa L. | MsG0480022796.01.T01 | _ |
| Oryza sativa L. | LOC_Os03g43890.1 | WD domain, G-beta repeat domain containing protein, expressed |
| Cucumis sativus L. | Csa013988 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000261s00014357.1 | _ |
| Codonopsis lanceolata | Cl_chr05_33530T | _ |
| Arachis hypogaea L. | AH13G49710.2 | WD-40 repeat-containing protein MSI1 like |