Gene detail

Detail information of Am05G028160.1 Annotation

Gene ID	Annotation
Am05G028160.1	cell division control 2

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G028160.1	mRNA	Chr05	148996893	149002789	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM05G028160.1
TCCTGGACATGCCTAGCTACTCTCTCCCTGGACTCATAGGGAAGTGGACCAACATCCTCTAGAGGCGAAGGCGGAGCTGGAGGTGAAGACGGAGTCGGAGTCATGCGGGGAATGGACACCTGGAAGTACCATGGTAGGTACTCGTCATCACAAGCACCCTGGACGGGTGTCTGTCGACCGCTGTCCCTGAAAGCCCGCGTTGGGGACTGATAGAACATCAGCTGCTGTACTATGACCTCCGAAGATGGACGTGGGCCCGAAATAGGTGGATCAGAAATCTGCTGGACATATCCAAACTGCCAATGAACCTTGTCTGGCATATAAGGCACCGCCACATCCCCCCACAGCAGCCAACCTCTGAATAATGAAATGTTGTGAAACCGGAGGTACTGTCTGTGGTCGTCCCATGGGCTCCATATGACCTGCTCCCTCTGCAAGTCATCCACCAGCTGCCGAAACTCCGGAAGCTTGATACTATCGCACTTCTTGTTCGCCCACCTGCTGCAACGTGGAAGTTCATTGGCACCGAAGTCTTTCCGCACCACGATGGTGGGGAAATACTCATATATCCAGCACTAAAATAATAATAAAAATAAATAAGTAATTATATAAATAAAAGTAATTAAAAAGAAATAAAAATAATTAATTAATTAATTACCTGCAGCAGAGAAGCGTATCCGCCAATCTGCGACGTCTCCTAGTAACAAACATCATTCAGCTGCTCGTAGAGAATAGCTAGAGCAGCTGGACCCCAAGCCCACTGGCCACACAGGGCAAAGTCCGAAATAAGAGTCACCCACTTTTTGAGATATACCTCTTTTTGAGATATATCCGGAAATCCCTAAAATTTAACTTTCCGGAAATACCTTAAAAAATGGTATTTCCGGAATGTTTTTTGGAAAAATACGTTCTGGAAATACGCCTTTTTTTTTAAAACAAACAGGCAGCAAGCCTGAATTTATTAAAAGTAAAAAGAAAACAAGACAAACCACAAGGGGGGACTAGACCAAAACCCTTGGCAATGATGACAATAATTGAAAGCCTAAAAAGGCTCCTAAAATAAACAACCAAAGAACTCTAAGAAAAGAAATTCTAAGGCAACCAAGACAACCCGAAGAAGAAAGCAGGTCAACACCCGATGAACCCCCACACACTCCACCCACCGCCTACTGAACACCCACATCAACCCCACTCCCTGCACCACCTCACTATCCTCACATTAAGCACACTCCCAAAGATCGAGGTTTAGAGGTGGAGGCCAGGAGACGATTGGGAAGGGGTTCCGAAGTTGAAGGCAAAAGGGGGGAGCCCGACTAAGAGAACTGCTAACTGAAAGCTGTCGACCAATGGACCCAAATTCCGAACACACAACCATCATCCATCGCCCACTGAACGCACGCGCCAAGCACCCTGCACCACCTCAATATCCTCACATTAAGCTCACTTCCAAAGATCGAGGTTAAAGGAGGAGGCCCGGGGATTGGGAAGGGGCTCAGAAGCAAAAGGAATAATGGCAACGCATCAGCAACCACCCACCACACCTGGATTCCAACCAAATCTGAAAGAAAACCCACCTAATCAGCACACCTCCTGACTCCCAGCACCGAAACACCAATCACCACCGCGAAGCCGTGCCACCGGCCAACGCCGCGACACGACCGAGCTTGACCGAGGTCGTCGAATCTAGCTACCACCACGGTGTTGTGCCACCAGCCAACACTGTGACACAACCAAGCATGACTTCAAGCGACGATGAGCAAATCAACGACGAACCGGGAAGTTTAGGGAAAAAACTCACTTTTTTTCGGAAATATGATGGAATGATGAATGATTTCGTTTTTTAACAATTTTTTAGGGGTATTTTGGTCCATTTGGTCAATTTGGGGGGTATGGAGTTAGGGGGGGGGGGGGGGTTACAAAAAAAAACACCCAAAGCCTTGCCATGGATGCCTTCACTTGGTTTCTACAATTTTATTTTTGAGTTAGATTATAAGGTAGTAAGGGATAATGTCATGACTTTAAGATTAGTTCTTTCTAAATTATTTTTAAGTGCAAAAAGATTTTATCGTTTTCTTTCCTTCCAAATTTTAGGTTAGGGTGAATTTTACTTGAAATTGAGATGAGAGAACAATACTGCAGAACACGAAGCTAAGATTGTAGATAGTTGTGGAGGTAGGTATTAAACTGCTTTGGCTAAAGAAGTAGATTGTTACACCAAAAAAACAAGTAGGTTTTTATTTATTTATTTAAAAAAAAGCTAATAATGAGTCAAAAAAAACTAATATTTTTTATTATTAGTAAAAAAAAGAGGAGGTTTATTTATTTTTTGGGAAATGCTCTTCCTAGCGAACAGAATTCGCGAAGAGTGACCCACGAACATGTTGGGTTACGCGATGCGTATGTTATTATTTTTTTTTTAACACCATTGCCATGTATTTTTATGGACGGCTGATTTACATACACGTCATTCGTTGAGGGTTTTAGCGAAAAGTTTTCGCTGGACACTTTTTTTTTTTGGCAAATTCTTAAGTACCATTGTAGGAATCAAACACAGGAGCAAACCGAGTCGACCCCTACGGACCATAGCCCAGTACCACTAGGCCAAATCCATTTGGTAATGACTTTTTTTTGACCAACTGAATAATGCACTCACAATTGACATGTTGGGTGGAGTACCCAAATTTATGTTAAGGGTGCATTAATTGACGCATATTTTTTTTATGGGAAAAAAAAGGAGGCAGATAGTAGTAGAATAAGCGGAGAAAGATTGACCAGAAAGAAAGAAAGGAGGCTGAAACTGAGACTGAGAGAGTCACTGCTGCACACGCTGTGTAACCGTCGCAACATCCTCTCACCGTTTATCGCTCTTGTAAGTAACTGCTCAGATCTTCTTCTTCTTCATCTTCAATCCTTCTCTTCTCTCTTAATATAATATTTCCCCCCTTTTTCTCTTTGGTGTTAATTAGAACCTCCCTTTGAAGAACTTAGAGAGCTTTTTTG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	4	287	2.90E-80
PF07714.20	PK_Tyr_Ser-Thr	6	199	5.30E-33

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:4.5.1:CMGC_CDK-Pl

Gene Ontology

GO term	Description	Category
GO:0007165	signal transduction	Biological Process
GO:0010468	regulation of gene expression	Biological Process
GO:0008353	RNA polymerase II CTD heptapeptide repeat kinase activity	Molecular Function
GO:0106310	protein serine kinase activity	Molecular Function
GO:2001141	regulation of RNA biosynthetic process	Biological Process

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain

trEMBL

trEMBL term	Description
I3T768	_

SwissProt

SwissProt term	Description
CDC2_VIGAC	Cell division control protein 2 homolog

KEGG

KO	Description	Enzyme
K02206	cyclin-dependent kinase 2	[EC: 2.7.11.22]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G48750	cell division control 2
Medicago sativa L.	MsG0280007787.01.T01	_
Oryza sativa L.	LOC_Os03g02680.2	cyclin-dependent kinase A-1, putative, expressed
Cucumis sativus L.	Csa021443	_
Glycyrrhiza uralensis Fisch.	Glyur000821s00020795.3	_
Codonopsis lanceolata	Cl_chr01_08940T	_
Arachis hypogaea L.	AH13G48820.1	Cell division control protein 2 homolog like

Expression pattern