| Gene ID | Annotation |
|---|---|
| Am05G028090.1 | mitochondrial editing factor 9 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G028090.1 | mRNA | Chr05 | 148861774 | 148864884 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13041.9 | PPR_2 | 71 | 103 | 2.90E-103 |
| PF13041.9 | PPR_2 | 137 | 169 | 2.90E-103 |
| PF13041.9 | PPR_2 | 311 | 338 | 2.90E-103 |
| PF13041.9 | PPR_2 | 372 | 419 | 2.90E-103 |
| PF13041.9 | PPR_2 | 473 | 520 | 2.90E-103 |
| PF01535.23 | PPR | 74 | 103 | 4.10E-103 |
| PF01535.23 | PPR | 139 | 169 | 4.10E-103 |
| PF01535.23 | PPR | 282 | 309 | 4.10E-103 |
| PF01535.23 | PPR | 314 | 339 | 4.10E-103 |
| PF01535.23 | PPR | 345 | 373 | 4.10E-103 |
| PF01535.23 | PPR | 476 | 505 | 4.10E-103 |
| PF12854.10 | PPR_1 | 137 | 164 | 9.30E-81 |
| PF12854.10 | PPR_1 | 340 | 369 | 9.30E-81 |
| PF13812.9 | PPR_3 | 474 | 520 | 2.40E-34 |
| PF20431.1 | E_motif | 591 | 653 | 9.90E-18 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0004519 | endonuclease activity | Molecular Function |
| GO:0005737 | cytoplasm | Cellular Component |
| GO:0016020 | membrane | Cellular Component |
| GO:0000959 | mitochondrial RNA metabolic process | Biological Process |
| GO:0016071 | mRNA metabolic process | Biological Process |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR046960 | Pentatricopeptide repeat-containing protein At4g14850-like, plant |
| IPR002885 | Pentatricopeptide repeat |
| IPR046848 | E motif |
| trEMBL term | Description |
|---|---|
| A0A2K3NXF7 | _ |
| SwissProt term | Description |
|---|---|
| PPR88_ARATH | Pentatricopeptide repeat-containing protein At1g62260, mitochondrial |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G62260 | mitochondrial editing factor 9 |
| Medicago sativa L. | MsG0480022718.01.T01 | _ |
| Oryza sativa L. | LOC_Os06g12360.1 | pentatricopeptide, putative, expressed |
| Cucumis sativus L. | Csa013969 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000821s00020786.1 | _ |
| Codonopsis lanceolata | Cl_chr07_17810T | _ |
| Arachis hypogaea L. | AH03G46020.2 | Pentatricopeptide repeat-containing protein At1g62260, mitochondrial like |