| Gene ID | Annotation |
|---|---|
| Am05G026430.1 | plant U-box 8 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G026430.1 | mRNA | Chr05 | 144803472 | 144805505 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF04564.18 | U-box | 6 | 72 | 1.70E-18 |
| PF13445.9 | zf-RING_UBOX | 11 | 47 | 1.80E-06 |
| PF11789.11 | zf-Nse | 9 | 48 | 2.20E-06 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | U-box |
| GO term | Description | Category |
|---|---|---|
| GO:0005737 | cytoplasm | Cellular Component |
| GO:0003955 | NAD(P)H dehydrogenase (quinone) activity | Molecular Function |
| GO:0016020 | membrane | Cellular Component |
| GO:0010181 | FMN binding | Molecular Function |
| GO:0016874 | ligase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR003613 | U-box domain |
| IPR045210 | PUB protein, U-box domain, plant |
| IPR016024 | Armadillo-type fold |
| IPR011989 | Armadillo-like helical |
| IPR000225 | Armadillo |
| trEMBL term | Description |
|---|---|
| A0A1S2YHP0 | _ |
| SwissProt term | Description |
|---|---|
| PUB8_ARATH | U-box domain-containing protein 8 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT4G21350 | plant U-box 8 |
| Medicago sativa L. | MsG0480022540.01.T01 | _ |
| Oryza sativa L. | LOC_Os02g49950.1 | spotted leaf 11, putative, expressed |
| Cucumis sativus L. | Csa020929 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000044s00005190.1 | _ |
| Codonopsis lanceolata | Cl_chr03_33340T | _ |
| Arachis hypogaea L. | AH20G01870.1 | U-box domain-containing protein 8 like |