Detail information of Am05G025430.1 Annotation
Gene IDAnnotation
Am05G025430.1 RING 1A
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am05G025430.1mRNAChr05141817076141823232-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF13923.9zf-C3HC4_2691099.60E-12
PF00097.28zf-C3HC4701092.90E-08
PF13639.9zf-RING_2691102.50E-07
Gene family
Gene familySubfamily
Ubiquitin FamilyRING

Gene Ontology
GO termDescriptionCategory
GO:0046872metal ion bindingMolecular Function
GO:0016567protein ubiquitinationBiological Process
GO:0004839ubiquitin activating enzyme activityMolecular Function
GO:0016746acyltransferase activityMolecular Function

InterPro
InterPro termDescription
IPR017907Zinc finger, RING-type, conserved site
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR044592Putative E3 ubiquitin-protein ligase RING1a/b

trEMBL
trEMBL termDescription
A0A1S2YIH9 _

SwissProt
SwissProt termDescription
RNG1A_ARATHPutative E3 ubiquitin-protein ligase RING1a

KEGG
KODescriptionEnzyme
K10695E3 ubiquitin-protein ligase RNF1/2[EC: 2.3.2.27]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT5G44280 RING 1A
Medicago sativa L.MsG0480022356.01.T01 _
Oryza sativa L.LOC_Os05g41795.1zinc finger C3HC4 type family protein, putative, expressed
Cucumis sativus L.Csa000632 _
Glycyrrhiza uralensis Fisch.Glyur000117s00007626.1 _
Codonopsis lanceolataCl_chr08_19660T _
Arachis hypogaea L.AH13G40280.2Putative E3 ubiquitin-protein ligase RING1a like

Expression pattern