Gene detail

Detail information of Am05G025330.1 Annotation

Gene ID	Annotation
Am05G025330.1	MAC/Perforin domain-containing protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G025330.1	mRNA	Chr05	141653485	141656742	-

Sequences

CDS:

>Am05G025330.1
ATGGGTATCAGAATCAATAGTAGCTATGGAAATGCAGGGTTGGATCCACAGTTAGCAGCTGAGAAAGCTGTGAGTGTGATTGGTCATGGATACGATCTCTGCAATGATATAAGATTATCTGCTTGCAAGTCTAGGTTGATCGATATTGACATGTCACGCAACAGAGACCTTGTCTTTCCTTCTAGTGTTGTTGTCCCTAAAGTTCCTGTATCCATCAAGTGTGACAAAGGTGAACGTACCAGATTTCGCTCTGATGTCTTCTCTTTCAATCAGATGTCGGAGCATTTCAACCAACAACTATCTTTGTCAGGAAAGATTCCATCTGGCCAATTCAATAAAATGTTTGACATGAGAAAATGTTGGTCAAGGGATGCAGCTTCCACTAAAAGTCTTTCCTTTGATGGATGGTTCATAACATTATATACTGTCGAGTTAGATAGAACTAACATAACCCTTTCTGAAAATGTGAGAAAAGAAGTGCCTTCTTCATGGAACCCTGCTGCTCTTGCTGAGTTCATTGAAAAATATGGTACCCATGTAGTTGTTGGGGTGAAGATGGGAGGTAAAGATGTGATTCATATCAAGCAATCAAAAAATTCAGATTTGCAGCCAACTGAACTGCAGAAATTGCTAAAGCAATTAGCTGATGAAAGGTTTTCTATGGATACAAATCAAAGTTCATTAGTCAATCCTGCTGAAATATCAAGAAAACAAAAGGATGATCATGCGAAGCTTTGGGGGCAGCAAAAGCACAATCCGACTGCTGGCAGGCCTGTTGTAAAAAGTCACTCCAAGAACGATGATATCGTAAGTATTTCAGTTCGACGTGGAGGTATTGATGCAAATCAACCTTATAACCAGTGGCTCTCAACCATATCACAGTCTCCTAATGTCATATCATTGTCTTTGGTGCCTATTACTTCACTACTGAATTCTGTTCCAGGAAATGGATTTTTAAGTCATGCAGTGAACTTATATATTAGATATAAACCTGCAATAGAAGAGTTTCATCAATTTCTGGAATTTCAATTGCCTCGGCAATGGGCCCCAATGTATGGTGATCTGCCTCTTGTATTCGACCATAAGTATAAAAGGACCACCTCTCCATCACTTCAGTTCACTCTCATGGGACCCAAACTCTATGTTAATACTGTGAAGGTTAACTCGGGTAACCGGCCAGTAACAGGCATTCGATTGTACTTGGAAGGCAAAAAGAATGACCAGCTATCAATCCATCTGCAGCATCTTTCAGAGGTACCTGGTGTCCTTGAAATTTCAGAAGATCAAGGTTATGATCCTATTGATGAACCTGATGAACGAGGCTACTATGAACCTGTGAAATGGAACATGTTTTCTCATGTATACACAGCACCTGTACAGTACAATAGTTCCAGAATGGATGAGTCTACAGCTATTGTTACAAAGGCCTGGTTTGAGGTTAAATTAGTGGGAATGAAGAAAGTTCTTTTCCTGAGACTTGGATTCTCAACAGTAGCATCTGCGCTAATTCGCAGATCAGAATGGGATGGACCTTCAACCTCATCTAGAAAGTCAGGATTCTTCTCAATCTCAGCACTGATGAGTTCAAAGCTTAGCAAAGAAATGCAGTTACCTGAGAAACCAACTAAAGTGGACATAAACTCAGCAATTTATCAAGGTGGCCCTCCTGTGCCTACAAGGACACCGAAAATGCTTAGCTTTGTGGACACAAAGGAAATGGTTAGGGGTCCAGAGGATCCACCTGGATATTGGGTTGTCACTGGGGCAAAGCTGTGTGTAGAGGGTGGCAGAATCTCAATCAAAGCAAAGTATTCCTTGTTGACTATATTGTCTGAAGAATCTATGCTGTAG

Protein:

Promoter(3k):

>AM05G025330.1
ATACGTATCCGACACGGGTACGTTTCCATTTTTGAAGTATCGGGGCTTCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAATAGGTGTTCACTACAAAAAAAGACGGATTAGCGACAGACAGGGCGTTCGTCGCTAAAATCAATTTTAGCGACGGAAATGTACTCCTTTAGCGACGGATTGGGTTTTGGTTGAAAACGAGGTATTTAGCGGCGGAAATTGGCTAAATTAGTGACGGATTCAACATGGCGCGAAATATGAAAATTTTGGTTCGAATTAGCGACGGATTTCCCTCGCTAAAAACCATCGCTAATCTTTGGAAACTGTGCCACTGACTGTTGCAGTTTATTTGACACGTGGTCAAAGTTAGCGACGGAATTCCCTCACTAAATCCGTCGCTAATCTTGGGAAATGTGCCACTCTGACCGTTGTAGTTTATTTGACACGTGGCCAAAGTTAGCAACGGAATTCCCTCACTAAATCTGTCGATAATCTTGGGGAAATGTGCCACTCTGACCGTTGCAGTTTATTTGACACGTGGCCAAAGTTAGTGACAGAATTCCCTCACTAAATCCGTCGCTAAATGTTAATTTTTTTTATAAACCCGAATTCTTTCTTTCCTCTTTCATTTCTTCCTCTTCTCCGTTTTCCTCTTCCTCTTTCATTTCTTCCCCTTCCTCTTTCATTTCTTCTTACCACCACCACCATCATCTTCTCCTTTCAACACCACACCACCACCACCACCACACCATCCTCTTTCATTTCTTCCTCTTCCTCTTTCATTTCTTTCTCTTTCTCTTTCATTTCTTCTTACCACCACCACCATCATCGTCTCCCTTCAACACCACACCACCACCACCATCACCACACCATTTTTTTCTTCCCTTATCTCCCCAACCCCTTATCTCTCCCTCCCTCTATCTGAACCTCACCACCACCACTACCACACCATTTTTTCTCCCCTTATATCCCCAACCCCTTATCTCTCCCTCTCTCTATCTGAACCTCACCACCACCACCACCACCACCACACCATTTTTTTCTCCCCTTATCTCCTCAACCCCTTATCTATTCCTCTCTCTATCTGAACTTCACCACCACCACCAGCCTTTTTTTTTATAAAAAAAGTGAGATTAGCGACGGATATCCGTCGCTAATACTGATTATTAATAGCCTGACATGCGCCAGTAATTAGCGACAGAAAATCCGTCGATAATTAGCGATGAATTTTATTCCGTCGGTAACCATTAGCAACGAGCTTTTTAGCGACGGAATTGGTTCGTCGCTAATTTCATCGCTAACAGTCATTAGCGAGGGAAAAATCCGTCGCTAATGCACTGTTTTTTTTGTAGTGGTTGTCGTTATTGTTCTCCACTAAAAAACAATAATATATGAGTAGTTATGAAATTTGAGATATTTATTTGTTTGAGTAGCTATTAGCAATTATAGGTCTTTTTAAGTGCAGAAGAGCATCAACCATACAATGGATATTTTTTATCACTAAATTCCCTTTGCGTATAGGTGTTGGGTATAGGAAAGAATATAAGAAAAGAAATACTCAAATTTACTAAGCTTAAATATAAATATAAATAAATATCAACTAACCCGGTTGTATTTTTTTAGGTTTTACCCAGAGTATCTACCGCCGACCGCAGTGATTAATCTCCTCGCTGAATTGTAGGTACCTCGAGGGGCAGGACAACTGGTCCAGAACTTAAATATAAATATAAATAAATATCAACTAACTCGGTTGTATTTAATCTCATTATTTAATTACACTTTTTATCTTTCAATAGCATTCTACACTTCTAAGAAAATGGTATATTGCTAAGTTTAATTTATTTTTATATGAAATCAAAAATATTTAATAAATACAACCAACTTTTTTTTTTATAATTATAACTAACTTTCTTAACATGTTGTGATGGTTAGTTTGTGGTCTTATAAATGAATTTTAAGGGAGTAAATTAATACTCTCACACAAACATACACACAGATATATATATACCTTCCCATTCATTTTCACAATAAATTAAAGATATCATTAAATTTTATTTTGTTATCAACTTATTAATCCCTTTTCGATGACGTCATTTACTTTTCATTATTCTATTGTAAACATTGCTTTTTTAAAATAAATGAAAAGTTAAATATTAATTAAAAAAAGTTAAAGTGACACTAAATTTTGAAAATGACAAATAAATAATACTCCATCCGTTTCGTATTATATGACTTTCTAACAAAAAAAATTGTCCCATAATACATGACTTTTTTAATAATATCTCTTTCATAACTCTATTAATTTATTTTCTCAATATCATTAATGAAGGTTAGTTTGATAAACTAACTCATAATTTCTCTTTCCCATACAAAATTAACTATTTTTCTTAATATGTGTGAAATGACCTAAAACGACAAAACGAGATATAATAATATGGGATGGAGGGAGTAACAAAAATTTGATAAAAAATAAAGTCAACAAGACTCTACAAAAAAGTTAAAGTCAACCGCAGAGCCAATGACCAGTTCCACTTAAAGTGGCCAAAAATGTTTCTCACACGTTACAACGTTATTAACCATGCTATACTGCCACGTGGAGGATACAGATTACAAACAAACACACGGAGCCGCCTTATTGTGCTTTTCTCTCCTTCTTTCCTCGTTCCCACTGCCTTGTCACAATCTTCAAAGTTCAAAGGTCCATTCTTTCTTTACTTTGAATACAAAAACCGTCCCTTTTACTCCTTCACAAGAACTCTTCATTCAACCCCAAAAATAATAAGATAAAAAAAATGGCCCGCGTCAAGGACCCTATGAAATGTCTCACAGTACAAGAAGAAAATACCACCTTAAAAGACTACCACTTCAACACTAGTTCTTATTCTCCTTGTTATTATTATTACTGTTAGTGTTATCATTCTTTGTGGAGAGAATTTCCTAAAAGGGTGCAAGTGCAACAACACACATA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01823.22	MACPF	110	326	2.50E-36

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0004568	chitinase activity	Molecular Function
GO:0009626	plant-type hypersensitive response	Biological Process
GO:0046930	pore complex	Cellular Component
GO:0052542	defense response by callose deposition	Biological Process
GO:0010337	regulation of salicylic acid metabolic process	Biological Process

InterPro

InterPro term	Description
IPR001862	Membrane attack complex component/perforin/complement C9
IPR020864	Membrane attack complex component/perforin (MACPF) domain
IPR044663	MACPF domain-containing protein CAD1/NSL1-like

trEMBL

trEMBL term	Description
A0A1S3E9P3	_

SwissProt

SwissProt term	Description
NSL1_ARATH	MACPF domain-containing protein NSL1

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G28380	MAC/Perforin domain-containing protein
Medicago sativa L.	MsG0480022351.01.T01	_
Oryza sativa L.	LOC_Os05g48360.2	membrane attack complex component/perforin/complement C9, putative, expressed
Cucumis sativus L.	Csa016337	_
Glycyrrhiza uralensis Fisch.	Glyur000117s00007621.1	_
Codonopsis lanceolata	Cl_chr03_05420T	_
Arachis hypogaea L.	AH03G37140.1	MACPF domain-containing protein NSL1 like

Expression pattern