| Gene ID | Annotation |
|---|---|
| Am05G025190.1 | homeobox-1 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G025190.1 | mRNA | Chr05 | 141255869 | 141266237 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF02791.20 | DDT | 563 | 618 | 8.70E-18 |
| PF05066.16 | HARE-HTH | 744 | 812 | 4.50E-16 |
| PF00046.32 | Homeodomain | 45 | 101 | 5.20E-16 |
| PF15613.9 | WSD | 1128 | 1200 | 1.90E-13 |
| PF15612.9 | WHIM1 | 950 | 991 | 1.90E-08 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | DDT |
| Transcription Factors Family | HB-WOX |
| GO term | Description | Category |
|---|---|---|
| GO:0000785 | chromatin | Cellular Component |
| GO:0048506 | regulation of timing of meristematic phase transition | Biological Process |
| GO:0016020 | membrane | Cellular Component |
| GO:0010228 | vegetative to reproductive phase transition of meristem | Biological Process |
| GO:0045892 | negative regulation of DNA-templated transcription | Biological Process |
| InterPro term | Description |
|---|---|
| IPR028941 | WHIM2 domain |
| IPR028942 | WHIM1 domain |
| IPR009057 | Homeobox-like domain superfamily |
| IPR044977 | Homeobox-DDT domain protein RLT1/2 |
| IPR001356 | Homeobox domain |
| IPR018501 | DDT domain |
| IPR007759 | ASXL, HARE-HTH domain |
| trEMBL term | Description |
|---|---|
| A0A1S3E9R5 | _ |
| SwissProt term | Description |
|---|---|
| RLT1_ARATH | Homeobox-DDT domain protein RLT1 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G28420 | homeobox-1 |
| Medicago sativa L. | MsG0480022330.01.T01 | _ |
| Oryza sativa L. | LOC_Os05g48820.1 | DDT, putative, expressed |
| Cucumis sativus L. | Csa022567 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000552s00024339.1 | _ |
| Codonopsis lanceolata | Cl_C00052_unscaffolded_00060T | _ |
| Arachis hypogaea L. | AH13G40450.2 | Homeobox protein 10 like |