Gene detail

Detail information of Am05G024940.1 Annotation

Gene ID	Annotation
Am05G024940.1	glutamate receptor 2.7

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G024940.1	mRNA	Chr05	140702267	140706448	+

Sequences

CDS:

>Am05G024940.1
ATGCATTTCCCATCAACTAGTCCTCAAGTACTACCAATAATAATTTCAATCTTCTATTTAGTCATCTCCTTGTTTCTCTTCAATGGCTACCAAGCTGAGGCTACTAATGAAGACAGCAAAGTTATATCTATAGGTGCAATCATTGATGTTAATTCTCGCGTTGGGAAAGAACAGCGAGTAGCCATGGACATTGCAGCTCAAAGTTTCAATAACACTTCAAAGACATACAAGCTGGCTCTCTATTTTCAGGAAACCACCAAAGATTCCTTCAGAGCCACTTCTCTTGCTGAAGAGATGATTAAAATGCAGAAGGTGCAAGTGATTGTAGGGATGCACAAATGGACAGAAGCAGCTTCAGTGGCAGAACTAGCACACCAAACTCAACTTCCTATCGTATCATTTGTAGCACCTACCATTACTCCACCACTGATGCATATTCAATGGCCTTCTTTGGTAAAACTAGCTAACAATGCAAATGCTTATATAAAATGCATTGCAGATATAGTCCATGTTTATGGCTGGCAGAGAGTAGTAGTCATCTATGAAAATGATGCCTATGGTGGAGATTCAGGAATGTTAGCACTATTATCTGAGGCTCTCCAAGATGTTGGTTCAATGATTGAATACCGTTTAGCTTTGCCATCACCTACTTATCTTCCTAATCCTAAAGAGTTTATTCGCGAAGAGTTGTTTAAGTTAATCGAAAACACAAAATCTCGGGTGTTTATTGTGCTGAAATCATCATTAGAAATGGGAGTTCATTTGTTTAGAGAAGCTTCACAAATGGGACTTGTGGATAAAGAATCAGCTTGGATACTTCCAGAGAGCATAACTAATTTGTTAGATTCTGTTAATAAGTCTGTTATTTCCTATATGGAAGGAGCTTTAGGAATCAAGACCTATTACTCTGAAAGTAGTAGTGAGTATCAAGATTTTGAGGCTCAGTTCCGGAGAGCTTTTCGCGACAAGTTTCCTGAGGAAGATAACCGAAATCCGGGATTTTATGCTTTGCAAGCATATGATAGCATTAAAATTGTTGCACAAGCAGTGGAAAGAATGGAAAGTGGCAATAGTAATGAGAATACGACTTTGCTAGAAGAAATATTGTCTAGCAATTTTCTTGGTTTGAGTGGAAAAATTCAATTTGGGTCAGAACAGCTCTTGCAGAATCCTCCTACCTTGAGGATTGTAAATGTAGGTGGGAAGAGTTACAGAGAATTAGACTTTTGGACTCAAGAAAATGGGTTCTTTAGTAATCTTTCTATAGAACAAGGTAGAAATAGTAGTACTTCTAGGAACTCAGAAAGTTTAAGTGATGCAGTAATTTGGCCTGGAAAGTTGATGAGAGTTCCAAAAGGGTGGAATCTTCCTACTAAACAAAAACCATTGAGAATTGCAGTCCCTGGAAGAACCTCATTTTCTAAGTTTGTCAAGGTTGATTATGATGAACAAGAAAAACCAGTTTGTACTGGATTTTGCATTGAAATTTTTGATAAAGTGTTAAACATTTTGGAGGATGATGGCCTGCCTCTGCCATATGAATATGTACCTATTAATGCAACCTATCCGGAACTGATTCAACTTGTTTATAACAAGACATATGATGCGGTTGTCGGCGACATGACGGTACTGGCAGAAAGATTGCAATATGTAGATTTCACAGTGCCATATGCAGAATCAGGGTTGTCAATGATAGTTACTGAAAAGTCTAATGAATCAGCATGGATGTTTATGAAGCCCTTCACTTGGCAAATGTGGGCTGTAACTGGTGCAATCTTGATTTACACAATGTTTGTAGTATGGTACTTGGAGCGGGAATCCAATTCAGAGTTTCAAGGCAATTGGAAAAACCAGATCAGCACAACTCTTTGGTTTACTTTCTCCTCTCTATTCTTTGCTCATAGGGAGAAAATGCACAACAATTTATCCCGCGTAGTGATGGTATCATGGCTCTTTCTAGTTTTGATTCTTAATTCAAGCTACACTGCTAGTCTTTCTTCAATGCTCACAGTTCAACAACTGCGAGCAAATGTGACAGACATTGAATGGCTGAAGAAGAATAACATGAAAATTGGTTGTGATGGAGATTCGTTTGTCAGGACATACCTAGAAAAAGTCGAAAAATTCAAGCCAGAGAACATCATAAACATTAATAACGAAAACAATTATGTCAGTGCATTCAAAAACTACTCAATATCAGCTGCTTTTCTTGAACTTCCATATGAGAAAGTATACATTAGTAAATACTGCAAGGGGTATTCTGCCTCAACACCTACCACCAGATTTGGTGGACTTGGATTTATGTTCCAGAAAGGCTCCCCCTTGACCAGAGATGTTTCTAAAGCTATTTTGCAGCTCTTAGAGCAGGGAGAAATAAAGAGGTTAGAAGATATATGGCTGAATCCCAGAGGTGAGTGCTTCAACGATGTGACCTCCAAGACTACAGAAAGTTTGAAGCTTAAAAGTTTCTGGATTCTCTATGTGATTTCCGGTGCCACTTCTACTATTTGTTTTATACTTTCTACCATCCATTCACTAAAATCCAGTCAAACACCCAAAGATGGGGCACAAGGCAATGGCTCCTCGTGGAAAAGGGTGTTTGAATTAACTAAGCAAGTTTGTAGCATAAAGCATTATAGAGCAAGCAAGGCCAAGAGGGATGTTGAGGATTGCCCGTGCCCTGAGCATCAGCAAACAACGACTCCTCAACTACCAGAAATCATAATGGTTTCTTCCCCACCAACACAAGAAATCATAACGATCTCTTCCCCACCAACACAGTTGTAA

Protein:

Promoter(3k):

>AM05G024940.1
GACTTTACCATTTCTAGTGAGGTACGGTTTTCTATTCTACAATTCGCGGATGACACAATGTTGTTGGGCAAGGCCACGTGGGAAAATCTTTGGAGCATAAAGTCTTTACTTCGTGCTTTCGAATTAGTGTCCGGTTTGAAGATTAATTTCCATAAGAGTAAGTTAATTGGCATCAACACCCCGGATGATTTTCTGGAAAGAGCTAGCGTCTTCCTTTATTGTAGAACGGAAGCTTTACCGTTCAAGTTTTTGGGTATTCCGATTGGTGCAAATCCTAGACGGGAAGTTACTTGGAGCCCCGTTCTTGCTGCGCTTAGAAAACGTTTGGCTTTGTGGAAGGGTCGTTTCTTGTCGATCAATGGTCGGGTTACTCTCATCAACTCCGTCTTGAATAGCATCCCTCAATACATGCTATCATTCTATAAAGCTCTGAAAGTGGTGATTAAGAAGATGATCAAAATTCAAAGGGATTTCCTTTGGGGTATCAAAGAAGGAGACAAGGGAATGTGTTGGGTTGCTTGGGATAAAGTTTAAAAAAGCAAAAAAGGATGGCGGTCTTGGTATTAAAAATCTCGAGTTATTCAATATTTCTTTGTTATCTAAGTGGAAATGGCGGGCTTTGACGGATACTAATGTCTGCTGGAGCCGTTTGTTGAGACATCGTTATGGGGACTATGCTACTACTTTTGTTCATAACTCGGCTGAAGGTATATCTAGCCGGAACTCGGGATCAATTTGGTGGAGAGACTTGGTAAAGTTGGATAACACTCTTGAGGAACGGCGAAGGTTCGCGTGGTGTATTAAAAGGGGGCTTGGTGACGGAACCTCCATTAATTTTTGGAAGGATCAATGGCTAGGCATAGAGCCTTTATTCAAAGTTTTTCCGCTGTTATGTGATGGGGAAGGGCAACAGCAGCTCTTGGTGGCTGACTTGGGTGCTTGGAATGGTGAAGTTTGGGTGTGGTCTACACCGTGGCAGCATCACACGGATTCGGTTCAGGTGGCTGAAGGCCAAATTTTGGACAGCATTTTACAGTCAGTTAAGCCGACTAGAGGAAGGAAAGACGCATGGCTATGGCCACATGATACTTCCAAGAGTTTCACGGTAAAATCTTTTTATCATCAGCTGTCTTGTAGTGACATATCTTCCAACATTTCGAACCATCAGCACTTGTTAGGGGGACTATGGAAATCTATTGTCCCTTCGAAGGTTGTAGTCTTCGAGTGGAGGTTACTGTTAGATTCTTTACCAGTGCGTGAGCAGCTGTTGCACAGAAACGTCATCCACTCCGAGCTAGAAGTTGGTTGTTCGTTTTGTAATTCCTCTCGCGAGTCTGTCGAACATCTTTTCATCTCTTGTGGTTTTGCGCGTTCTGTTTGCCATATTGTTGGTACTTGGCTAGCTGTTGACGTGGATGTCTCTCTGGGTGTGGAGGATTTCTTTAGTAATTGTGGCCAGTGGTGTACAGGGAAGAAAGCAAAGCGGGTGAAACATCTCTTCTGGTTAACTACTTGTTGGAGCATTTGGCTAGCTAAGAACGGAGTCATATTCAAAGAGGAGGAACCAAATATAGAGGGGGTTGTTAACCGGATCAAGAACTTATCTTGAAGTTGGTGTCTTTATAAACTCAACTGTAATTCATCTTTGTCTGTATCTCTATAGTGGTCTAACCCACTTACATTCTTTAACAATCTGTAATCTAGTAGGGGGAGAAACAGTGGGCTAGGTTGGTGTTTTCCCACTGTGGTGCAGGTTGTACGAGGTACTCTTTTTCCTTCCTGAGTCTTTTTCCCATTGGGTTTTGGCTCAGGAAGGTTTTAAGGAGACCCTCCCCTTTCCTATATCTCCATTGTAAGGGTTGGGCACCCCTTGTGCTCCCTTCAATTAATTTTTTGCTTATAAAAAAAACTATCCTTAATAAACAAGTTAAGATTATCAGCTCCCCACTTAAAAATTATTATATTTATTGGAATCTCTTACTGATAAAAAAGTTATATTTTTTGGAATCTCTTCTAGAATCTTAGAAAATCCCCTTCGGTATGACCTCGTCACCTCGAGTTAATTATCTAGACTCATCATGTTAAATTTCTGTGCAACTTCCCACTAAGGAGAAATGTCTAAACTATCTTTACACATGAACTAGTACAACTTCTCTCCTAGCATATAGTTGAGTCAAAAAAAATCTATATCGTCTATCATACACATAATTTTCGGCAAATGCTTGTTAAAAGGTCGTAAGGCTTAGCACAATTGACAAAATCAATATTTTTAGATTGAATATTTTCTTTAGATCAATGTTATTTAGATTAATATTAATCAATCAAGTCGGGTACCTAATTATAAAATTAAGATTAAGATTAATTAATTAATTAATCAAGTCAAGTACCTAATTAATATGGCTGCAGTGCTGTTGCTTTCTGTTCTCTAGTTTCAACTTCATATAAGCGCGTATTCGGGGACAAAAGACACTTTTAACGTTACATAGAAAAGGTTTTAAAAACAATAAAACTATTATGAGGACCATATTAAGTTGCAAAATAAATGTCCACCACCTTGAACTAGTCAGTATCATCAAAATTTGGAGTGCTTAATATCCCAAAACCACATGTCCAACTTAGCATTCAAAGTCACCAATCTGTGAAGGTTCACAGAAACATTCAGTTTGTCTTCAAAGTCTCCAATCTCCTAAGGCTCTGAGCTATTTAGCATATTCTTTGTTCTCAAGTGCTCAATTTTCTGCATTCCAAGACAAACCTTTTGTGTTTTGCCACCCTTCTAGTCATAGCCACATTTCCATCCGTCTTTTCAAACAGTACAACTTTGTCTTTAAGTGTGAAAGTCAACTATTCATAATAATTGACCAAATCAAATTCCTTGCCCCCACCATCATTATATATAGTTTCTCTTCCCAACCTTCTTTCTTCATAAGTTTACTCACATATTGCCTGCATTGCATGAGACTACATAGGAAGCCTGTTTATACACAAAATTGCTAATAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01094.31	ANF_receptor	60	399	2.90E-41
PF00060.29	Lig_chan	582	831	1.60E-28
PF00497.23	SBP_bac_3	489	801	1.20E-20
PF13458.9	Peripla_BP_6	49	399	2.70E-17
PF10613.12	Lig_chan-Glu_bd	521	568	1.10E-07

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0106074	aminoacyl-tRNA metabolism involved in translational fidelity	Biological Process
GO:0051499	D-aminoacyl-tRNA deacylase activity	Molecular Function
GO:0005975	carbohydrate metabolic process	Biological Process
GO:0000049	tRNA binding	Molecular Function
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	Molecular Function

InterPro

InterPro term	Description
IPR001638	Solute-binding protein family 3/N-terminal domain of MltF
IPR001828	Receptor, ligand binding region
IPR044440	Plant glutamate receptor, periplasmic ligand-binding domain
IPR028082	Periplasmic binding protein-like I
IPR017103	Ionotropic glutamate receptor, plant
IPR001320	Ionotropic glutamate receptor, C-terminal
IPR015683	Ionotropic glutamate receptor

trEMBL

trEMBL term	Description
A0A396IDI5	_

SwissProt

SwissProt term	Description
GLR27_ARATH	Glutamate receptor 2.7

KEGG

KO	Description	Enzyme
K05387	glutamate receptor, ionotropic, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G29120	glutamate receptor 2.7
Medicago sativa L.	MsG0280006802.01.T01	_
Oryza sativa L.	LOC_Os09g25960.1	glutamate receptor, putative, expressed
Cucumis sativus L.	Csa015619	_
Glycyrrhiza uralensis Fisch.	Glyur001277s00024300.1	_
Codonopsis lanceolata	Cl_chr03_12550T	_
Arachis hypogaea L.	AH13G40700.1	Glutamate receptor 2.7 like

Expression pattern