Gene detail

Detail information of Am05G024580.1 Annotation

Gene ID	Annotation
Am05G024580.1	Phox-associated domain;Phox-like;Sorting nexin, C-terminal

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G024580.1	mRNA	Chr05	139771386	139779888	+

Sequences

CDS:

>Am05G024580.1
ATGAAGGCCATGGAGAGTGTGAATGATCTGATCCAAGAAGCCAAACTTCGCACTCTCTCCTGGGCCCTCTCTATATTCGCCGTTTCTTATTTCCTCACTCATACAAGTAAATCGATGTGGATGAATGTACCGATGGCAATTCTATTTGTTTCTGCTATGCGCATTCTTTTCAATAAGGTGGAATTTCGGTGGAAGGTTCAAAAACCTAGATCGCGGACATATCTATCTCATTTGGAGAAAAAACAGTTGTCTCTAAATGATCCACGTCTCTCTAGTTTACCTCCCCCAGCGACAAAATGGAAGAGGAAAATTGATTCTCCTGCTGTGGAGGATGCAATGGGTGATTTCATTGATAAGATTTTGAATGATTTCGTGGTTGATTTGTGGTACTCGGAAATTACTCCGGATAAGGAGTTTCCTGAGCAGATACGTGCAATAATCATGGATGTTCTTGCTGAAATATCAGGAAGGGTTAAAGAGATAAACCTCGTTGACTTGTTGACCAGGGATTTAATTGATTTAGTAGGTGATCACTTGGAACTTTTCAGAAGAAATCAAGCTGCTATAGGTGTTGATGTTATGAAAACATTATCTTCAGGGGAGAGAGATGACAGATTGAAATTTCATTTGTTGAATTCTAAGGAGCTTCATCCGGCACTTATATCTCCTGAGAGTGAGTACAAGGTTCTCCAGCGGCTGATGAGTGCAGTTTTAGCTACAGTACTAAGACAACGAGAAGCGCAGTGTCCGGTGGTTCGTTCAATATCTCGGGAACTTTTGACTTGCTTGGTAATGCAGCCTATTATGAATTTGGCAAGCCCTGGGTATATCAATGAGCTGATTGAAACCCTTCTACTTCTCCTTAACGATGATGGTAAAAAGTGGATGGGTGGTGATCAGTCGACTAATGTAGCAAGTCATCATCATGGTCATTCTGTTGCTACTGTGGGTGGGCATGGCAATCTCACATCCTCTAACAAGAATCCATCTTTAAATCAAGGAACTGATATGACATTGGCTAAAACGAGTGACCAGGGAAAGCCATCATTGCAATATAATGCACTCTCTCAAGAATCTTCACAGGCCAAGGCTGCTGATTGGGCACGAATGTTGGAGGTTGCAACTCAGAGGAGAACTGAAATTCTTATGCCTGAGAATCTCGAGAACATGTGGACAAAAGGAAGGAATTACAAAAGGAAAGAGAAAAAAGTTGTCAAAGCTGGATCTCAGGATCTTCCAACTAAGAGTCCTGCTACAAGCAGTTCATTGTCTTCTAGGAAAATGTCTCCGGAAACAGTATTGCGTAAACGTGGAAAGTATGAAATTGCAGAAGGGGAGTCTTCTGCTCCATCAGTGCATACCTTGGTTTCAGATCCTCTACAAAGTGTTGCAAGTACAAATAGGTCAGAGTCTTCTCAAAACCGTGGCAATAAATTATCTTTTGAGGAAGATCTGGGAGTTGATAAAGTGAAGGGTACAGTGGATCTTGCTTCTGAAGGGTATAAAAGTCCACTAAAGAGGTCTAACAGTGCTTCTACCTTAGGAATCCAACCTAATCAAGAAGGTAGCTCCATTATTGCCGAGTTTTACAACCCAGAATTTGAGAGGCTTAGTGAAGGATTCCGGGGGAAGAGCTCTTCTGACATGATTATTAGGAAAGAGGGGCAATTATTTCCTAAGATCCGGTGCCGGGTTATGGGAGCATATTTTGAGAAAATTGGGTCCACATGTTTTGCGGTCTACTCAATTGCAGTGACTGATGCACAAAATAGAACTTGGTTTGTAAAAAGAAGATACAGGAATTTTGAGCGATTGCATCGACAACTTAAAGATATTCCTAATTACACATTACATCTGCCTCCTAAAAGGATATTTTCCTCAAACACTGATGATGCCTTTGTACATCGCCGTTGCATTCAGCTTGATAAATATCTCCAGGATCTCCTGTCAATAGCTAATGTTGCAGAACAACATGAAGTATGGGACTTTTTTAGTGTTTCCTCAAAGAACTACTCTTTTGGGAAATCTTCTTCAGTGATGAAGACCTTGGCAGTCAATGTGGATGATGCCGTGGATGATATTGTACGCCAGTTCAAGGGGGTTTCAGATGGTTTATTAGGGCGAAAGGTTGTTGGGTCGCCATCCCTCATCAACGAAGGGTCGTCCACATCCCCCACACGGAACTTGTCCGGGATTGCAGATGAAATGGATAGAAGTATTCCAAGGCAGAGTACTACAACAGCAAGTGTGTTAAGTTCTGATACCGAGGAAGGTGATAAGAACAGTAATGTAAGCCATGAGAATATTGATAGAGAAGAAGAAGCACAAGATGATGTATGGCAATCTGACAATGCATTGATCTCGAAGGGTTACCCATCACTGGTAACAAACCATGATGAAGAATCCAGCAACTTAGATTTTGACAGAAAGCATGATCTGTTAGGGGAAGCTAAGGTTGGCAATGATGTTCCAGCTACAAATTTCGTTCTTATTAATGATAATTTGGAGGATCCTGTTGGAGTGCCAGTGCCACCTGAGTGGTCCCCACCTAATGTGAGTGTCCCTCTTTTGAATTTGGTGGACAAGATATTTCAGCTTAAGAAAAGAGGTTGGATAAGAAGACAGGTCTTTTGGATATCAAAACAGATATTACAGTTGGTGATGGAAGATGCTATTGATGATTGGCTCATGAGGCAGATTCATTTGCTTCGGAAAGAGAACACTATTGCTCAAGGGATTCGTTGGATCCAAGATGTCCTCTGGCCTGGCGGTACCTTTTTTTTGAAACTAAGGACACCTCAGATACTTAATGGTGACAATGATCAAAAGCCTTCTCAAACAATAAGTGGAACTGAGGGACACAACATCACGAAACATGAATCGGGGTCGTTTGAGCAACAGCTTGAGGCTGCTCGTAGAGCAAGTGACATCAAAAAACTACTGTTCGATGGAGCTCCAACAACTCTAGTCAGCTTGATTGGGCATAAGCAGTATAGACGTTGCGCCAGGGATATATATTACTTTAGTCAGTCTCCTATATGTGTGAAGCAACTTGCCTATGCAATTCTGGAACTTGTACTTGTCTCCATCTTCCCTGAAATGAGGAATGTTGTATTGAGTGTTCGTGAGAGTACGCATGCTCACCAATCCTAA

Protein:

>Am05G024580.1
MKAMESVNDLIQEAKLRTLSWALSIFAVSYFLTHTSKSMWMNVPMAILFVSAMRILFNKVEFRWKVQKPRSRTYLSHLEKKQLSLNDPRLSSLPPPATKWKRKIDSPAVEDAMGDFIDKILNDFVVDLWYSEITPDKEFPEQIRAIIMDVLAEISGRVKEINLVDLLTRDLIDLVGDHLELFRRNQAAIGVDVMKTLSSGERDDRLKFHLLNSKELHPALISPESEYKVLQRLMSAVLATVLRQREAQCPVVRSISRELLTCLVMQPIMNLASPGYINELIETLLLLLNDDGKKWMGGDQSTNVASHHHGHSVATVGGHGNLTSSNKNPSLNQGTDMTLAKTSDQGKPSLQYNALSQESSQAKAADWARMLEVATQRRTEILMPENLENMWTKGRNYKRKEKKVVKAGSQDLPTKSPATSSSLSSRKMSPETVLRKRGKYEIAEGESSAPSVHTLVSDPLQSVASTNRSESSQNRGNKLSFEEDLGVDKVKGTVDLASEGYKSPLKRSNSASTLGIQPNQEGSSIIAEFYNPEFERLSEGFRGKSSSDMIIRKEGQLFPKIRCRVMGAYFEKIGSTCFAVYSIAVTDAQNRTWFVKRRYRNFERLHRQLKDIPNYTLHLPPKRIFSSNTDDAFVHRRCIQLDKYLQDLLSIANVAEQHEVWDFFSVSSKNYSFGKSSSVMKTLAVNVDDAVDDIVRQFKGVSDGLLGRKVVGSPSLINEGSSTSPTRNLSGIADEMDRSIPRQSTTTASVLSSDTEEGDKNSNVSHENIDREEEAQDDVWQSDNALISKGYPSLVTNHDEESSNLDFDRKHDLLGEAKVGNDVPATNFVLINDNLEDPVGVPVPPEWSPPNVSVPLLNLVDKIFQLKKRGWIRRQVFWISKQILQLVMEDAIDDWLMRQIHLLRKENTIAQGIRWIQDVLWPGGTFFLKLRTPQILNGDNDQKPSQTISGTEGHNITKHESGSFEQQLEAARRASDIKKLLFDGAPTTLVSLIGHKQYRRCARDIYYFSQSPICVKQLAYAILELVLVSIFPEMRNVVLSVRESTHAHQS*

Promoter(3k):

>AM05G024580.1
CCTCGCAAATTTTTTTCTTTTTTCCTTTATATCCGTTTACACCTTCACTCTTCTTTCTCACTCACTCACTCTTCACCATTCCTCTTCCCTTCCTCTTCCCCCTTCCACTTCCTCTCACACCCTTCTTCTCTCTTCACTCTTCCAACACCACCACCACCACCATCATCACCACCTCCTCTCACACTCTTCTTCTCTCTTCACTCTTCCACCACCACCACCACCACATACCTCCTACCACTCTCACTCACTCTCTCTTACTCTTCACCACCACCAACCCACCACCCCACCACCACCACTCTCACTCTTCTCTCTTTCTCCCTCTCTCTCTCTCTTACTCTTCTCCTTCTCTCTCTACTCTAAACCACCCATCACCACCACCACCACGCCACCACCACACCACCACCACGCCACCACCACCACTCTCACTCCTCTCTCTCTCTCTTTCTCCCTTACTCTTCTCCTTCTCTCTACTCTAAACCACCCATCACCACCACCACGCCACCACCACCACCACACCACCACCACGCCACCACCACCACCACCACACATCACCACAAAAATTAATAATATAATATAATATTCATTAATTAATATATATAAAAAAAACAAGCCATTCAGCACTGGACACGTGTCATTTTTTTTTTGAAAACTGCAGTCATTAGCGAGGGAATTAGCGAGGGCAAAATCCGTCGCTAATTCCTGCGCATTTACCAACCCCTGCAACTGAGTCCCATCACCTGAAAAGCTGCAGTCATTAGCGAGGGAACTAGCGACGGCATAGTCCCTCGCTAATTAGCGAGGGATCCAATTTCCCTCGCTAATCCCATTTGCGAGGAGGGAATTAGCGAGGGAACCAGTCCCTCGCTAAGTCCCTCGCAAATGACCATTAGTGAGGGAATCAGGTCATTTTGCGAGGGAACTGTCCCTCGCTAATGACTAGTTTTTTTGTAGTGTGAAGATGTAAAACCAATTGGATGAAAATGGGTTTTTGTGCAAAAACAGGATGAGAATGGTGAAATTGTGAGATACAAAGCTTGACATGTTGCTCAAGGGTGGATGCAAGTACTTTTCAGTACTTAATTAGCCTTGTAGTGCATGAAGAGCTCAATTTTCACAAGATGATTGTTGCTACGACTTGTTTGTATGACTCATTTGATAGTCATAATTATTTGAAGATCCCTAAAGGATTTAATATTTCAATACACACTTTTCGGATTCTCGAGATGATTGCTCAAATTGAATCAATCCCTCCATGAGATAATATAATTTGAACACATATGGTATAATTGTCTAAATTTATATTCTAAAGGAGAGATACAAAAATGACATCATTTGTCCATATAGTTTTATGAAAATATTTGGAAAAGAATTTGCTATAACTGATGTCTATGTTGATGACATAAATATCGGAACTCCTGAAGAGCTTCCAAAAACTATAGACTGTTCAAAGAAAGAGCTCTAGATGAATGACCTCAAATTATATCTGATGGATTTTGAGGTTGAAACTGTAGTTGGACCTCTACATGAAAATCCCAGAAGGATTCAAGATAAAAAGAAATATCTTCAAATAAATTCTTTTGAAAAACAAAGTCTCATATTGATCTGCAGAAATTATTTATATTGAGTACATGAGTTGTGTGGTAAGAATATATGAAACATTTAGTCCCGAAGACTATGAAAGCATGCATGCATATTACCAAATGTTATATCCATTGATATGGTAATATTTTGTGATAATCAATAGTAATATAGTTCATTACAAACCAAAATGCATTAAAACAAAGTGGGATGCATATTTCATTTTTGACTATCCTAATGAATAAATTATTTTATATGTTACCCAAATTAACCATGCAGATACAAAGTATTTTTCTGATCTAGATCAAGTCAGATCGCAAGTCAGCTATTGTTTGCATGTGGGGACATTGAAAGATCTTTATGATCTACAAAACAATCTATGGTTCCTGTTTCTTCATTTCATACTCAAATGCCAACAAGTCAAGGAAGATGTCCTAAAGATACTACTGACCGCAAGCTCCATTAAAAGAAGATAAATCAAATGGATAGAGAGGAGTAGATTGCTCTGTATGCATTCAGGGAGAAGCTCCAGATGTTGGAATTCATATTCCTAAGCGACACTTCAAACAGGGGGAGAAAAACTGCACTTTTTTTCCTTTACCATGGTTTTGTCCCACTGGGTTTTCCTAAAAAGGTTTTTAACGAGGCAGTTCCCACTGAAATGATATTGTACTCTTTTTCCTTCACTAGATTTTTATCCCACAGGGTTTTTTCTAGTAAGGTTTTAATGAGACATATCCTCGATGGACATCCAAGGGGGAGTGTTATGAATAATATATGGTAATGGATGTCCACTCCTATTAGAATTCCACTTTCCTTAATGTAATGAGTTGTTAGTGAAACTTTTAAGATTGATATTTCATTTACCTTTTCTCACCCTATAAATAAGGTTCACTCCTATGTAAAGTCACATTTAAAAAGTACAAGGAAAATGCTCTCGTATTCCTAATTTGTTCTCGTTCATCTTCTCCATCTTTTTCCTTGTTTTCATCGCTTATTTTATAACAAGAACCATATTTATTAACAGAAAGTAACCTTGTATTTTTTCTATTTTTTTTTTGACAAAGTAATTTTTTCTATTAAATGAGGGGAAAAAACGGGTAGTACATTGAATGAGACGATCGAAATATTTGGGAACAGTAGAAATAGACAAGTACAAATTCGACGCACTATTTTTCCCATATGATATGGGACGCACTGTTATCATTATCGCCTGCATCAACTCACCCCACCTCCAAATCGAATTCAACTTCGGGCACGTTGGGTTGTTACTTTAACAAGAGCACCAACTCATAACTCACAAAGAATATTAATATCCAGGTGTTACTGTTTCTTGCAAAAACCCCAGACAAGACAATAATACCAGACCAGACCTAGGTTGTCCATGATTTCAATCGTTGTTGTCTGATTCCATTAGAAAGT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF02194.18	PXA	106	283	1.30E-40
PF08628.15	Nexin_C	871	1012	4.20E-32
PF00787.27	PX	589	666	1.70E-14

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0005768	endosome	Cellular Component
GO:0016301	kinase activity	Molecular Function
GO:0016773	phosphotransferase activity, alcohol group as acceptor	Molecular Function
GO:0140096	catalytic activity, acting on a protein	Molecular Function
GO:0016020	membrane	Cellular Component

InterPro

InterPro term	Description
IPR013937	Sorting nexin, C-terminal
IPR036871	PX domain superfamily
IPR003114	Phox-associated domain
IPR001683	Phox homology

trEMBL

trEMBL term	Description
A0A1S2YIP7	_

SwissProt

SwissProt term	Description
SNX16_MOUSE	Sorting nexin-16

KEGG

KO	Description	Enzyme
K17925	sorting nexin-13

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G15900	Phox-associated domain;Phox-like;Sorting nexin, C-terminal
Medicago sativa L.	MsG0180001262.01.T01	_
Oryza sativa L.	LOC_Os11g06040.1	PX domain containing protein, putative, expressed
Cucumis sativus L.	Csa003553	_
Glycyrrhiza uralensis Fisch.	Glyur000006s00001681.2	_
Codonopsis lanceolata	Cl_chr04_15280T	_
Arachis hypogaea L.	AH20G18160.1	Sorting nexin-16 like

Expression pattern