Detail information of Am05G023980.1 Annotation
Gene IDAnnotation
Am05G023980.1 RING/U-box superfamily protein
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am05G023980.1mRNAChr05137709950137715756+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF13639.9zf-RING_28158562.50E-11
PF12678.10zf-rbx18138568.10E-09
PF13923.9zf-C3HC4_28158558.30E-09
PF00097.28zf-C3HC48158551.30E-06
PF17123.8zf-RING_118158421.70E-06
Gene family
Gene familySubfamily
Ubiquitin FamilyRING

Gene Ontology
GO termDescriptionCategory
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InterPro
InterPro termDescription
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR045191E3 ubiquitin-protein ligase MBR1/2-like

trEMBL
trEMBL termDescription
A0A396I991 _

SwissProt
SwissProt termDescription
MBR2_ARATHE3 ubiquitin-protein ligase MBR2

KEGG
KODescriptionEnzyme
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Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT4G34040 RING/U-box superfamily protein
Medicago sativa L.MsG0080048703.01.T01 _
Oryza sativa L.LOC_Os04g55510.1zinc finger, C3HC4 type domain containing protein, expressed
Cucumis sativus L.Csa011473 _
Glycyrrhiza uralensis Fisch.Glyur000405s00021254.2 _
Codonopsis lanceolataCl_chr04_16490T _
Arachis hypogaea L.AH20G19610.2E3 ubiquitin-protein ligase MBR1 like

Expression pattern