| Gene ID | Annotation |
|---|---|
| Am05G023180.1 | RING/U-box superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G023180.1 | mRNA | Chr05 | 135547975 | 135551441 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF01485.24 | IBR | 274 | 334 | 1.80E-12 |
| PF01485.24 | IBR | 354 | 403 | 1.80E-12 |
| PF13456.9 | RVT_3 | 62 | 164 | 9.00E-08 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | RBR |
| GO term | Description | Category |
|---|---|---|
| GO:0003676 | nucleic acid binding | Molecular Function |
| GO:0016874 | ligase activity | Molecular Function |
| GO:0003964 | RNA-directed DNA polymerase activity | Molecular Function |
| GO:0140657 | ATP-dependent activity | Molecular Function |
| GO:0006278 | RNA-templated DNA biosynthetic process | Biological Process |
| InterPro term | Description |
|---|---|
| IPR017907 | Zinc finger, RING-type, conserved site |
| IPR001841 | Zinc finger, RING-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR044066 | TRIAD supradomain |
| IPR036397 | Ribonuclease H superfamily |
| IPR002156 | Ribonuclease H domain |
| IPR002867 | IBR domain |
| IPR031127 | E3 ubiquitin ligase RBR family |
| trEMBL term | Description |
|---|---|
| A0A6A5LU30 | _ |
| SwissProt term | Description |
|---|---|
| RGSL1_ARATH | E3 ubiquitin-protein ligase RSL1 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT4G19670 | RING/U-box superfamily protein |
| Medicago sativa L. | MsG0280007611.01.T01 | _ |
| Oryza sativa L. | LOC_Os12g43560.1 | zinc finger, putative, expressed |
| Cucumis sativus L. | Csa014695 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000032s00003872.2 | _ |
| Codonopsis lanceolata | Cl_chr02_46530T | _ |
| Arachis hypogaea L. | AH03G01850.1 | Uncharacterized protein like |