Gene detail

Detail information of Am05G022620.1 Annotation

Gene ID	Annotation
Am05G022620.1	anaphase-promoting complex/cyclosome 2

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G022620.1	mRNA	Chr05	133896012	133902622	-

Sequences

CDS:

>Am05G022620.1
ATGTCCATGGAGGATTCTCGCTCGTCTTTATTCAACCTAGGTATTTTGGACACTCTCACCCAAGATGAACTGCACGAAATCCTCGACAGCTACATCGCCTTCTGCAACGCCACACAATCTCTTCTCGGAGGCGCCGGTGACCTCTCCGTCGGTGCTGACTTTGTTTCCCACGTTCACACTCTCTGCGAACATCGCCTCGACTCACTCGTTCGCGACCACTTTCTCCGAGTCCTACAGGAAACGTTTGAACGAAATGGGGCATCGAGGTTTTGGCGGCATTTTGAGCCTTACGCTAATGTTGCTTCTTTGAATATGAATGAGGATCTCGATATTGACGAGGAAGAGATTCAGAGTGTGTTGTCCAATGCTTTGGAAGAAATATCTTTAGAGAAACAGTATCAGGAGAAGTGCTTGTTAATGTTGGTCCATGCTTTGCAATCTTACAAGGACCAGATGTCAGAGGAAAGACATACTTTTGAAGCTGACAGAAATTACCTTACTTCTAAGTATCAATGGATTGTCTCTTCTGTGCTTATGTCTACAATTCCTCGTGTTTTCCCTGTTATACTGCATTGGTATTTTAAAAGAAGGCTGGAGGAGTTAAGTACAATCATGGATGGAGATTTCAATGATGATGATGATGTATCTCAAAGTAAGGATGACATGGATTTAGATGAAAAAGGAAAAATATGCAACAAGATTGGTGATATGGATGTTGATGAGTGCTATAACGACAACAGGTTTTCAGGAAACAATAGACTGGTGAAGAACATCGGAAAAGTTGTTCTTGATCTTAGAAGTCTTGGATTTACTTCTATGGCTGAAGATGCTTATGCTTCTGCTATATTCTTACTACTAAAGGAAAAAGTATATAATGTAGCTGGAGATGATTTTAGGAGTTCTGTTTTACATTCTATTCAAAGCTGGATACAGGCTGTTCCTCTCCAGTTTCTGCATGCCCTTCTTGTCTATCTTGGTGACTCTGTTAGTTACGAAAGTACTTCATCAGGTCTCAAATCACCTTTAGCGCCACAACCGTCATCATTCTGTCCTGGAATTGATACTCCTTCTGAAGGTCTTGTCAGATGGAAGTTGCGGCTGGAATATTTTGCTTATGAAACACTACAAGATTTAAGAATAGCCAAATTATTTGAGATAATTGTTGATTATCCTGAGAGCTCTCCTGCAATCGAAGACTTAAAACTGTGTCTTGAATACACTGGACAACATTCAAAGCTGGTGGAGTCATTTATTTCTGCACTGCGTTATCGCCTTCTTACTGCAGGCGCATCAACCAATGATATATTACATCAATATGTTTCAACTATTAAAGCCCTAAGGACAATAGACCCTGCAGGTGTTTTCCTTGAGGCAGTTGGTGAACCAATAAGGGATTATTTAAGAGGAAGGAGAGATACCATAAAATGCATAGTGACCATGCTGACAGATGGGACGGGCGGAAATTCAAGTGCATCTGGAAATCCTGGAGACAGCCTTCTTGAAGAGTTGAACAAAGATGAAGAAATTCAAGAGAATGCTGGTATTGATGATGATTTTAACACTGATGATAGGCAAGCATGGATCAATGCCACACGATGGCAACCCGACCCCGTGGAAGCAGATCCATTGAAGGGAAGCAGAAACCAAAGGAAGGTTGACATACTTGGGATGATTGTTGGCATAATTGGTTCAAAAGATCAATTAGTTCATGAATATCGAACCTTGCTTGCTGAGAAACTTCTAAATAAATCTGATTATGATATTGACTCAGAGATACGTACTCTCGAACTCCTTAAGATACACTTCGGAGAGAGCAGCCTACAGAAATGTGAGATTATGCTCAATGATCTAATTGGCTCAAAGAGAACCAACACTAACATTAAAGCTACTATAAATCAGCCATCTCTAACAAGTGTCGAGGTGGAGGACAATGCAATATCCATGGATAAAATTGCTGCCACTATCATATCTTCTAATTTCTGGCCTCCAATACAGGATGAGCCCCTTAACCTGCCTGAATCTGTGGAGCAGCTCCTATCCGATTATGCGAAGAGATTTGGTGAAATCAAAACACCCCGTAAGCTTCAGTGGAAAAAAAGTCTTGGAACTGTCAAGCTGGAGTTGCAGTTTGAAGATAGGGTAATGCAATTCACAGTAGCCCCTGTTCATGCATCTATCATCATGAAGTTTCAAGATCAAACAAGTTGGACCTCTAAAAACCTTGCAGCTGCTATAGGGATACCTATGGATGTATTAAATAGGAGAATAAATTTCTGGATTAGCAAGGGGGTCATTGCAGAGTCGCCAGGGGTTGATTCCGTTGACCATGTATACACCATCATGGAAAACATGGCTGATACAAGTAAGAATGGAGGCAGCAATGGCAATACTCAGGAACTTCTTGGAGGCGATGAGGAAGAAGATAGATCTGTGGCCTCGGTAGAAAATCAACTTCGGAAGGAGATGACTGTGTATGAGAAATTTATCATGGGGATGCTCACAAACTTTGGTAGCATGGCATTAGACCGCATTCACAATACTCTCAAGATGTTTTGCATTGCCGATCCCCCATATGACAAATCACTCCAACAACTACAAAGCTTTTTATCTGGTCTTGTCTCCGAGGAAAAGTTAGATCTTCGCGATGGAATGTACCTTCTGAAGAAGTAG

Protein:

Promoter(3k):

>AM05G022620.1
TCCTCCTATTCCAAAACCCACACTGTGGCCCGGTCGTGGTCCCAGTCTCCCCCCGCAAAGCTAGTCGAGGGAAGTACTCAGAGATCCACGACTGAAATGCACAAATAAACATTATCGTTAAAAATAAAATACATAACATTAAAACAAACTCGTTAAAAATAAAAAAATAAACTTACCATGAGCAGCGTCGCATACCCCCCTAACTGACTGGTCTCCTGTAGGCAGGCAAAGTTCAGTTGGTCATATAAGAAAGCTAATGCTGCTGGACCCCATGCCCATCCGTCCACTGTGGTGATGTCTTCCAGTAATAGCAACCACTTTGCCTCAACTCTTGTGCCAGTCTTGCTACAAAAAATGCTCATGCCCAAAATAAGCAAGATAAATGCCCTCACACCACAAGTCTTGTCCTCCTCTCCTACGTCACGCCTAGCTATCTCCAATAGCAATCTTGATGCGTGTGCGTGTACTAGGAGCAGAAGTTTCTTCCGGGTCACCACCACCAGACCGTGATGAAGACTCCCCTCGCAAACTCGGTCGTGAAGAAGTCTCCCCTCGCAAAATCAACTCCGGTGAATCATGGGGGGATCCGGCCACCGATCCTCTGAAAAAAAATAAACACATAAACGGATCTATGTAAATCCGTTGAGGGTAAACGGAACCAAGACGGAGGTACTTACTTCTGTGCGACGAAAACAGATTTAACTTGGACAAAACGGATGTAGGTAAATCTGTTTGCTGGAAAACGGAAGTATGTAATTTCGTGCGACTATCTCAAACGGAAGTATGTAATTCCGTCTCGTGCGAAAACCGAACTCTCTCTCACTCTCAAACAGATGTAAGTGAATAATGGTAAATGTTTTGCAATTTTGTAAAATTGACAAGGGTATTTTCGTCTTTTCACCGGGTGCCGGGGGGGTATAAGGTGAATGTGTGGGGTACAAAAAAAACCCTAATGCTAAAATCAAACTAGAATTATGTATTAAAGAAACTAGAATCATGAAAAAAAGTAAATGAAAATTCATGAATAAGACATTTTTTTACTTATCAAAAGAATAAGACAATTTCAAAAGCTTATTTGCAAAAAATAATAATAGGCTTTACTCCATATAAAAATCTCTTAGAAAGTCAATCTATTTTTTTTTGTGAGAAAAAGGCCCAAAGGGCCTGAAAGTCAATCTATTTAAGTAAATATTTATAATACGATAATATTTTTAACTTACTAGAATAATAGATTTTTTTAATATGTCTAAATTATGTACTTATTGTTTAAGAGAAACGAGAAAGAGAGACAATTTTTTTACTTTGACTTAGTGTATTTGTAGAGATGTGGGAGGAAATATTAACGGCAAATAAGATGAAAGAAATTTAAAGATTTTTTTCTTTCTAAACCCCTCTTTTTTAATGCGTTTTTTGAGTTCCCACGTTTAGAGAAGTTTAATATCGTGAAGAAAAATAAATATTTTATTCAAGGCGAAGGACTGCTATTCCTTTTTCTCCTCTTTCATCCTTCTTTTCTCCAAAGCACTTTTCTCCCCTCCAAAACTCCCAAACATAGCCGGAGCGTTGTTTGGGAGGAAGATTTGAGAGAGTTTTAGAGGAGAGTTTGGTCTATATTTAATTTAGGCTTAAATATGTTTTTTGTCACTGCAAATATAACAACTTTTTAAATAAGTCCCTACAATTTTTTTTTAAAAAAAAATCATTGTAAAATAACATATTTTAAAAATACCCTTCTGTTAAGTTTTCTGTTAGTCATTTGCTGAGGTGGCTAACAGAGCTCCATATTGACATATTTGACTTCCAAATACAAAAACTGAAACCCTTTTTCTTAGGACAGGTAATCTGTGATGAATTTTATCCTGCTACCCTTTGTCCAGCATTTGAAGTCTGTGAAAGAAGAGCCTTAAATTCTGTCCTTCATGCTTAGGTATACTACAGCCAGACTGTCCTTCATGCTTAGGTATACTACAGCCAGATAACATTGTATGAATTTAAATTGAAGTACTTGGTGCTCCGTAGAAATGAGAGGGAATAGAGATGAGAGGGACAAATAGGGAGGAAGAGAGAGTGAGGGTAAAATAGGGAAATATATCCAAGTCAGCAATTTAAAATAAAAAAAATAACAAAAGGGTATTTTTGAAAAACTAAGTTATTTTGCGGGGACTTTTTTAAAAGTCAAATATGCCAACATGGAACTCGGTTAGCCACATCAGCAAATGGCTAACAGAAAACTTAACAGAAGGGTATTTTTAAAAAAATGTTATTTTGCAGGGACTTTTTTTTAAAAAATTGACAGGGACTTATTTAAAAAATCGTTATATTTGCAAGGACGAAAAACATATTTAACCTTTTAATTTAATATCTATTTGAGATTTTTTTTTGTTACCGTGTTTTTAGGGCGTAGTTTCCACCGGCTTTGCCGGTGACTAATCTACAACGAGGAACCTGGCTGGCCACGTGTAAACCCGGCTTTGCTGGTCCGTGTGGTTCTCCCCTCCCAACAGAGTTTTTGCCACACCCAAGATTCGAATCCGAGACCTTGGGATGGGATCCGAGCCCAGTTACCACTTAGACCAACCCTTATTTGGGATTTTAGAAAACTGAAAGAACAACATGATAGCTATTAATAAAACATTGTTAGTTAATCTCACTTCATTTTTGTTTAAAATTATTTTATACATTTCTCAATTTAGAATTGAAAATCAAGCTCCACTCCCCTCCTAAACTCTCTATCCAAACATATCCCGAGAGTTTTCTCCCGTGGGATCCACTAGTTTTCTTTCCTTCCATATTCGATCTACATCCAAACAACGCAAAAATAGAGTAGTTTTCTCTTGTTTTCTTCCTCCCTTTCTTTGTACTAGTTTCTAGCACCAAAAACTCCAACTTTGGAACAGAATCTCAGTGTGGAGTGGCAGTGGCACGGTATCAGTGAGCAAAAGAATGGTCAATTCTTTCGAATTTTAACTTCAACATCAACTTCACTGACTCACCACGATT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00888.25	Cullin	551	757	4.20E-27
PF08672.14	ANAPC2	828	886	6.80E-24

Gene family

Gene family	Subfamily
Ubiquitin Family	Cullin

Gene Ontology

GO term	Description	Category
GO:0003677	DNA binding	Molecular Function
GO:0051301	cell division	Biological Process
GO:0016874	ligase activity	Molecular Function
GO:0005819	spindle	Cellular Component
GO:0009561	megagametogenesis	Biological Process

InterPro

InterPro term	Description
IPR036388	Winged helix-like DNA-binding domain superfamily
IPR036390	Winged helix DNA-binding domain superfamily
IPR001373	Cullin, N-terminal
IPR036317	Cullin homology domain superfamily
IPR016158	Cullin homology domain
IPR014786	Anaphase-promoting complex subunit 2, C-terminal
IPR044554	Anaphase-promoting complex subunit 2

trEMBL

trEMBL term	Description
A0A2K3NX65	_

SwissProt

SwissProt term	Description
APC2_ARATH	Anaphase-promoting complex subunit 2

KEGG

KO	Description	Enzyme
K03349	anaphase-promoting complex subunit 2

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G04660	anaphase-promoting complex/cyclosome 2
Medicago sativa L.	MsG0780036860.01.T01	_
Oryza sativa L.	LOC_Os04g40830.1	cullin family domain containing protein, putative, expressed
Cucumis sativus L.	Csa012590	_
Glycyrrhiza uralensis Fisch.	Glyur000022s00002065.1	_
Codonopsis lanceolata	Cl_chr01_02810T	_
Arachis hypogaea L.	AH03G42600.1	Anaphase-promoting complex subunit 2 like

Expression pattern