Gene detail

Detail information of Am05G022560.1 Annotation

Gene ID	Annotation
Am05G022560.1	myb domain protein 105

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G022560.1	mRNA	Chr05	133577773	133579904	-

Sequences

CDS:

>Am05G022560.1
ATGAAGGTATGGCAAGCAAGTGAAAACACACATAGTAGTAGTCTTGGCCATTACCAATCTTCTTCCACTGCTTCCTCTTCCTATTCTTCTACTTCAATGGGAATGGTCTATGCAGACATGGGTTCTCTATCTCTTTGTTCTAACAACTATGGTGTGGTTTCTTCATCTCAAGCTCAAGATTACTATGTCTCAAAGGAGGGTCCTAGCTGGTCTTTACCTTTTATGAGAGACTGTCTTGTTGCCAGAAACAACTTTGAGGAACACCCCAACAACAGTGACCTTAATATTGAGGGTAAAGGTTCAGATTCTAGTGATGAAGCTGAGGAAAACAGTGACAAAATTAACCTTAACGAAGAGAACCCTAATGAGAATTGTGTCAGCAGTGGCAAAGAGGTAGATACCTCAATGCATTCCAAACTATGTGCAAGAGGGCATTGGAGGCCTGCAGAAGATTCTAAGCTCAAAGAACTTGTAGCTCTTTATGGTCCTCAGAACTGGAACCTCATAGCTGAAAAGTTAGAAGGAAGATCAGGCAAGAGCTGTAGGCTGAGATGGTTCAACCAGTTAGACCCAAGAATCAACAGAAGAGCTTTCAGTGAAGAAGAGGAAGAAAGGCTAATGCAAGCACATAGGATTTATGGTAACAAATGGGCAATGATTGCTAGGCTATTCCCAGGAAGAACTGATAATGCTGTTAAGAATCACTGGCATGTTATAATGGCTAGAAAGTACAGAGAACAATCCAGTGCTTACAGGAGAAGGAGACTCAGCCAATCTGTTTACAGAAGAATGGAAGACAATACAACAAGCTTTGTCTCTAGAGATCACATAGCCACAGCCACAACAGAACCATCACCATATTATCTCAATCTCCCAAATGGAGGACTTAGCTATAACATGCCTTCTAATACTTACCCTTATTCTTCCTTCCATGATGGTGTGGTTGAGTGTAGCTTAAGTGGTAAAGAAGCAATCTCAAGCAACAAACATGCCCCTCCTCCTATTGCCTTGTATGCTCAACCTCAACAGACACCACTTGATTTCTTCTCTGGTAGTAGAAGAAATGAGATGATGGGGGAGTATTTTAGCCAAATGGGATGCTGGGAGAGGCCAAGTGATAATGCACCGCCACATCCTCTTCATCAACAATCAAGTTACTACCCTCATTATCCACCACAATATATGATGGCAATGCAACAGCAAAACAATAACAATTTTTACAGTTTCTCAACAACAACAACAAGAGGTGGAGAGATATTGGCTAATAGTGAACCTTCACTATCATCAGTAGCAGAAGAGAGAGATGAAGTTCTGACGAGTGATCCCCCAGATGCAATTCCACCACCATTTATTGACTTCCTTGGAGTAGGAGCCACATGA

Protein:

Promoter(3k):

>AM05G022560.1
TATAATATTAAAAATATCTTATAAAACTAAAGCATATTGAAAATTAATGTGGTTTTTAATATGAGAAATCTATACCTTAAATATACCTTAAATCAAAATAAGCCTCAACCAATATCGTTGGCCTAATAGTATAAGTTACTCCGAGACACGGGTGTTGACAAGTGTGAAATTTGCTTTAAGCATTGGTAGTTCTAGTTTATCATCGAAAGCATTGCCGCACTCCTAGATAGGCAACAATAGTTTAATTACACTTTTGCCTCGTATTATTTCTCACTCATGATTTTAGTTCCCCAACTTTTTTTCCCATGATTTTGGCCTTCCCTATTATCTCAATTTCTAAAATCATTGCCCCTTCCAAATTTGGTCAAACATTTTGCTGACATGTACTCATGTATCCTATGTGGCATGCCATGTTGTACTGCCAGGTGGGATTTAAATTAAAAAAATATTATGTTTGGTTAAATTTGAAAAAGCATCTCCTTCATCCATCGAGATCCAAGTGAAAGAATCGTAATCCCATAATCCAGAATTTCTCCGTCATCATACTCGTCAAAGAAAGAGCGTTGTTTGCTACATATGCATGAAAAACAACTTTTTTTCACTCGTGATTTGAAGTAGGGGGCGATGATTTTGGAAATTGGGAAAATAGGCAACAATAGTTTAATTACACTTTTGCCTCCAATTATTTCTCACTCACGATTTTAGTTCCCCAACTTTTTTTCCATGATTTTGGTCCCCCCTATTTTCTCAATTTCTAAAATCATTGCCCCTTCCAAATTTGGTCAAACATTTTGCTGACATGTACTCATGTATCCTATGTGGCATGCCATATTGGACTGCCAGATGGGATTTAAATTAAAAAATATTATGTTTGGTTAAATTTGAAAAAACATCTCCTTCATCCATCGATATCCAAGTGAAAGAATCGTAATCTCATAATCCATATTTGTGGAAAAAAAGTTGAGAGACTAAAATCGTGAGTGGGTGAGAATAGGGGAACCAAAAGTGTAATTAAGCTTTTTGTGTTTTATATACAAGAGGAATTGAATTATCAAAGCTAGCATATTTAGAATTCTTGCTATTATTATTGCAGCGACTAAGAAAGTTACAGCAAGGAATTCTAGTGATACCCAGGTGAGATGAGTCTCTTGGCATCCGTCTTGTGATGATTGTATTGTTCTTAATGTCGATGGTAGTAGCTTCAGCAATCCTGGGCCTTCAGGTATGGGTGGAGTGATCTGTAGCAATGACGAAAGTTGGCTATTGGGCTTTGCTGGCTTCTTAGGCGTTCATGATAATTTCGATCTTTGCGGAATTAATGGCTTTGTATAGGGGTTTGTCCCTTGCGTGGGAGGAAGGCTACAAGAATGTTACTTGCTACTCTGACTCTCAATTGGCTAATGATTTGGTTCTAGCTCCTATGAACAATCTTCATGGCTATGCAACAATCATTCAGAACATCAAAGATTTCCTAAGGTTTGATTGGACTATTCACTTATATCACATTCTTCGAGAGGGAAATTCGGCAGCTGATTTCATGGCTAAGCATGGTGACAACAACTTGGAGACCTGGACAGTGTTTCGACATCCTCCTCCAGATTTGAAGAATGCCCTCGCAGCGGATGCTTTGCGAGTGCTAATTCCTTGCATTTAGTTTTTTTTCTTCTTCTTTTTTTTACTTTTCTCTCCACCTTGTATTACCAAAAAAAAAATCAATCTTCGTCCGCATAATTATATTGTTGTTAAGCACATCTTATTATATATATATTTTTAATGATAATTTTATTTTTGAGTTATATGAAAGAAAGTATTAGATTCAGTATAGTTTTATTGTTTTGGAGGAAATATAAATTTTATAAATATACTTATATTTATTAAGTTTCTATATATATATATATATATATATATATATATATATATATATTCTTGCATCTAAATATAGGGCATTTTGATTTTTTTGTACAGCTATTTTTTTAAAGAAGAGATAAGATTATTTTTATAGACTTTATAATATACATTTTTATGTGACAAAAAAATTCAATTTTATAATTTGAAAACATATAATAAGCGTATAGTATTTTTTTTAAAGAGAAGACATGTAGGGCTGTGATTGATATAGATGGAGTTGGAGTGAATTGGTTCAGGTAACAGAACAGGGACATATGTTTACCAGAGAGTTTGGTTGTTAGGAGGACCATGTAGTTACCTCAATTGAAACCAAAGTTAACCCACTTTCATTTCATTTCATTTCATTTCAATTCAATTCAATTGTGTCCTGGCTAGCCAGTTGTTAATAACAAGCACAAGCATATGAAATGAATATATAAGCAGGCACTGATACACTACTGATGGTGACTGGGACAGATATAATAGCTAGCTAGTTAGCTAGGGTCACTAACTAGTGAGTGTTTGTATTTGTGATTGTGAGTGTGAAGATGACAATGCTTGTTCCGTTGTGTAGCAATTGCAATGTGTTTGAAAAGAAAGGTGTCCCTGCTGCTGCACAAGGTGTAGTAAGCACCCATCACATTACTGTCTTTCTTGTCAATTTAGAGAGAGACAGCCTTAGACCCTGCAACTGCTACACCCCCCCATGAATGGAGAGAGAGAGAGAGAGAGTGAAAGAAAGTGTGTGTGGGTCTCTCACTCTCACACGTGTGTATGTGAGGTTGTTTGTTAAAAGAATAGAATAAATAGTAATATAATGACAGCAACCGGTTAAAATGAATTGAGAATGCTACTGTCATTGCCTCAGTCTGCCTACCTAACTACTTCAAACTCTCTCCCTCCCCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCAAAGCCCTTCACACCACTTTAGCTGTTTTAAGCTCTTCTCCTTCCTGCAAATAAATTGCTTCTTCATCTTCCCCTTTTATTAACCTTTCTCATCACATAAAATATTCTCTTGTACCTTGAGTGTGATGACTTGTTAACAGTTTCATAACCATCTCCACCGTTTCTTTATAAAC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00249.34	Myb_DNA-binding	143	189	1.70E-31
PF00249.34	Myb_DNA-binding	195	238	1.70E-31
PF13921.9	Myb_DNA-bind_6	146	206	9.80E-21
PF13921.9	Myb_DNA-bind_6	198	239	9.80E-21

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB

Gene Ontology

GO term	Description	Category
GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Molecular Function
GO:0006357	regulation of transcription by RNA polymerase II	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Molecular Function

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
G7JG94	_

SwissProt

SwissProt term	Description
MY105_ARATH	Transcription factor MYB105

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G69560	myb domain protein 105
Medicago sativa L.	MsG0480022074.01.T01	_
Oryza sativa L.	LOC_Os08g33800.1	MYB family transcription factor, putative, expressed
Cucumis sativus L.	Csa006289	_
Glycyrrhiza uralensis Fisch.	Glyur000022s00002054.1	_
Codonopsis lanceolata	Cl_chr01_20080T	_
Arachis hypogaea L.	AH13G45140.1	uncharacterized protein LOC106766687 like

Expression pattern