Gene detail

Detail information of Am05G022260.1 Annotation

Gene ID	Annotation
Am05G022260.1	thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4)

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G022260.1	mRNA	Chr05	132778729	132781683	-

Sequences

CDS:

>Am05G022260.1
ATGGCTTCCGCTTCCGCTTCCACCATCACCTCCTCTTTCCTTTACACCAAATCATCAAACCTTTCAGAGAGATCTTCTCTCTCTTTCAATCAGACCCTTAGCCTACCCTCTCAACGGAGGTTCGGCGGTGTGTCCATGTCAGCAGCGGCTTCGGCTTCGGCTTCACCTCCACCCTATGATCTTGGATCATTCAAGTTCGATCCCATTAAGGAGTCGATAGTGTCACGCGAGATGACACGTAGGTACATGACGGACATGGTCACGCACGCTGATACCGATGTTGTCATCGTAGGTGCTGGTTCCGCTGGGCTTTCCTGTGCTTATGAACTCAGCAAGAATCCTTCTGTCAAAATCGCTATCATTGAACAATCTGTTAGTCCTGGTGGTGGTGCTTGGCTCGGTGGCCAACTCTTTTCTGCAATGGTTGTGCGTAAGCCAGCACATGTGTTTTTGGACGAGCTAGAAGTTGAGTATGATGAGCTAGAGAACTACGTTGTAATCAAGCACGCGGCTCTATTCACTTCAACCATCATGAGCAAACTTTTGGCAAGGCCAAACGTGAAGCTTTTCAATGCTGTAGCAGCTGAGGATTTGATTGTGAAGGAAGGAAGAGTTGGTGGAGTTGTAACCAATTGGGCTCTAGTTTCAATGAACCATGACACTCAATCTTGCATGGACCCTAATGTTATGGAAGCTAAAGTTGTTGTTAGCTCATGTGGTCATGATGGGCCTTTTGGAGCCACTGGTGTTAAGAGGCTTAAGAGTATTGGCTTGATTGATTCTGTCCCTGGGATGAAGGCTTTGGACATGAACACTGCTGAGGATGCTATTGTTAGGCTCACTAGAGAGGTTGTTCCTGGAATGATTGTTACTGGTATGGAAGTTGCTGAGATTGATGGTGCTCCTAGAATGGGTCCAACATTTGGAGCAATGATGATATCAGGGCAGAAGGCAGCTCATCTGGCATTGAGATCACTGGGACTTCCTAATGCTGTGGACAATAATACTGCAGCAGGAAATATCCACCCTGAACTTGTTCTTGCTGCTGCTGCTGCTGCAGATTCTACTGAAACTGCAGATGCTTGA

Protein:

Promoter(3k):

>AM05G022260.1
GATTTCACTGTAAATAGGTAAATTCTCAAAGTAAATTCTCCCACTATGATCCTCAATGATATGTACCTTATCCGAGCTAGGGGATCGGCCTATATAGTTGGTAGTCTCGTATGATTGAAATCGTGGTGCAGCGCTCAAGTCGGATCACAAGGCGGGGGTTGCAAAAGAAAAACTCCAGCGCCCAAGTCAGAAGAGGAAGTCAAAGCGAGGTATGAGTGAGGATAAAAGTGTACCTGTCAACGGGGGTTGACCCCTATTTATAGACTCGGGCAGGCACCAGAGCCTAGTTGCACGTCACTGCTTTCACGTCTCCACCGTTAGATCAGTTGAACAGATGACTACCGTTGATGAGGCCTAGGCACAAATCGGTTGATTACCCACATGAAGGCAATCTCTTCTCGCAGAGTGGTTCTCTGCTTAGCGGGTCTATTCTCGGCCCAATAGACGAAATTGTCCCTTGGCCCAGTCCGGAACAGAAAGTAAAGGAGAAAGATATAGAAATTAGAGAGTTAGGTGACTAAGAATTGAGAGACAGAGTGGGAGTGGTGTGCTGTGTTACAACGTAAGTAAGTGGATTATAACTAGGATAGTGAGATCAGCATAACACAGAAGGGTTTGGTTGCTAATTTAGTACAACACTTCATTTAAAGTTGCGGGCGTACGGGCTACCAGAAGCCCAACCGGGCTAGCCACAAGCTCAGTTTATCTCGAGTTAGGATAAAAAGCTCGGTTATGAAAATAGGGTCAATTTTATAGACACAAGGCCTGCATTTTTTCGGTCTTTTTCAGACCGGCCTGATAGGCCCGACCCATTTTGCCAACTCTAGTTGCGATGGTCTATTTTACCAATAAGACCATCAACATTATCATCATTTGACACCTCATGTGTTGGCTCTTGATTGGGCACTTGATACTGCATCAACTCAAAATTAGCCTAGCTTAATTCGAAGGACACGCTCATTGATAACATCAAATTTACTTATGGTTTTTGTTAGGAGTCCCACATTGAGCAAATAAGAAGGCTCAATATGGTACTTAAGTCATAACAATTGGTACTGCGAAAAGGGCTACTTATGGTACTCCTCTGAATACTCTTGGACGTCGATCCTTAAAGAGGGCGACAATGTTAGGAGTCCCACATTGAGCAAATAAAAAAGACTAGTCTTTTGAGTTGGACTTTCCTCCTCGTGTAGTTAAGTCCTACGAGTTTAATGTTTGGTCGGTAAGCATCAACGTCTTCATATAAAAGTACTTAAGTCCTACGAATTTCTTTTAGGTACTAGTTCTTCATATATAGCCTTTGCACAACGTCTTCTAATCTAAATTATTAGTTATATAAAAGTAAATTCAGTGAATATCATACAATAATAAATTAAATGCTCTATCTTTTGAAAAGATATTATAAAACTTAATAAATAATTTAGACATAACCAATATAGAAATATAAAAAGTTTAACAAAGTAATCCATTTTCCATATATTATATATGTACCAAAAATATAATTTTCTTATATACAACATTCTATTATAATCCTGAAAAAATTCTATTATTAACTTTTACTATATATTTGAGAAAAATACAACTAATAATGAATAAACATTTGCCTAATAGAAAACAATTTATAAATAGATGACTAAAAGCATTGACGTAGGAAAATGTAGGGATTAAAAGTGACTGTAATTTTTTATAAGAACTAAAAATAAAATTCTCAAATCTTATAAAAACCAAAAATATATTTAACCTTAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTGAGGAATTTTAAAGATTAAATTTTATTGAGGAATTTGCTTTTAGTAAAGTCTATCTTTTTAAGTTTTATCTACATTTTTTTATATTTAGTGGCCGAGATTTGAGTCAACAAGTATTAAGTTTCAATCATTAAAACTTTTTAGCGGTTGGGGCTGAACCTCCACTAATCAAGGGTCGGGGGTTCGATCCCCGCATTGGATACGGAGCAGCATTAAAACTCTGAGCCAGCTGTCCTGCCCCTCGAGGCACCTACAATGAGCGAGAGATTAGTCGCTGCTGTCCATGCGGTGGATACCCGAGTTTACCCAAAAAAAGTTTCAATCATTAATGAACTTTAATGATACACATGTGAGAGATTTAGTTGATCCTCGTCTTAGATGTCACCATTTATATGACCCAAACTCAAAACATTTTATGAAAATATGGACCGAGAAACTAACATTCCCCCACCCCCTCACTAACATTGCTTATAAAAAAAAGTCATTTTCAAAAATATAAAAAAAGTGTCATAATCATCTCTACGAAGAATTATATTAAAAACAATCATAATTAGAAAAATATATTTTTTTTTTTAAAATTCAATATTTTCGAAAATAGAAAAAAAAGTATACACGATTAATTTAATAAAAACTACCAAATATACAATATTAGTTTAATAAAAACTACCAACTACAGGTTCTCAAAATAAACTACCAAATTAAGGAATTATTTACAAAAATGTAAATAAATACATAAGCTATGTTGGGTAAAAAAGAGCGAATAGCGGATAATCTAGCTTATAGCGGATCAGCTTATAACGGATAAAATAGCAGATTGAATTTAAAGTATTTAATAAAATTAGTGGTTGAACTAGCGTATAAATATAAAATTACATAAATAGACAGTAGTAATTAATGCTAAAAAATGAGAGAAAAAATTTATTTAATGAGAGATAAATGAGAAATTAAATTAAAGTAGTAACGGGGAAAAATAGGAGAAAAAATCCGTTGTAAGCTATCGGATTGTGTTGGCCAAACAGAGCCAAATTTTTGTCTTAGTATGCCACGTGTACTACATGCAATTTCTAGAAAAAACGCCATAATAAATTTTTTTCTCTCACCATTTCCCCATAAATATCACCCTCCATCCTCGAAGATCACTCACTCAAAACTCAAACACTCTAAACTGAAAATCAATCAACC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01946.20	Thi4	75	308	9.90E-113
PF01266.27	DAO	93	142	3.80E-10
PF00890.27	FAD_binding_2	93	129	1.00E-08
PF13450.9	NAD_binding_8	96	152	4.90E-08
PF07992.17	Pyr_redox_2	93	148	3.00E-06

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0016763	pentosyltransferase activity	Molecular Function
GO:0005506	iron ion binding	Molecular Function
GO:0009228	thiamine biosynthetic process	Biological Process
GO:0005829	cytosol	Cellular Component
GO:0016301	kinase activity	Molecular Function

InterPro

InterPro term	Description
IPR002922	Thiazole biosynthetic enzyme Thi4 family
IPR027495	Thiamine thiazole synthase
IPR036188	FAD/NAD(P)-binding domain superfamily

trEMBL

trEMBL term	Description
A0A1S2YGX1	_

SwissProt

SwissProt term	Description
THI41_VITVI	Thiamine thiazole synthase 1, chloroplastic

KEGG

KO	Description	Enzyme
K03146	cysteine-dependent adenosine diphosphate thiazole synthase	[EC: 2.4.2.60]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G54770	thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4)
Medicago sativa L.	MsG0480022039.01.T01	_
Oryza sativa L.	LOC_Os07g34570.1	FAD dependent oxidoreductase domain containing protein, expressed
Cucumis sativus L.	Csa017067	_
Glycyrrhiza uralensis Fisch.	Glyur000022s00001993.1	_
Codonopsis lanceolata	Cl_chr04_32390T	_
Arachis hypogaea L.	AH13G19270.1	Thiamine thiazole synthase 2, chloroplastic like

Expression pattern