Detail information of Am05G021660.1 Annotation
Gene IDAnnotation
Am05G021660.1 RING/U-box superfamily protein
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am05G021660.1mRNAChr05130774193130774771-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF13639.9zf-RING_2821252.60E-14
PF12678.10zf-rbx1821251.90E-11
PF13923.9zf-C3HC4_2821246.50E-10
PF17123.8zf-RING_11821111.10E-08
PF00097.28zf-C3HC4831244.80E-07
PF14634.9zf-RING_5821254.00E-06
PF12861.10zf-ANAPC11931285.30E-06
Gene family
Gene familySubfamily
Ubiquitin FamilyRING

Gene Ontology
GO termDescriptionCategory
------

InterPro
InterPro termDescription
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

trEMBL
trEMBL termDescription
A0A9D5AP23 _

SwissProt
SwissProt termDescription
ATL41_ARATHE3 ubiquitin-protein ligase ATL41

KEGG
KODescriptionEnzyme
K19038E3 ubiquitin-protein ligase ATL41[EC: 2.3.2.27]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT2G42360 RING/U-box superfamily protein
Medicago sativa L.MsG0280010802.01.T01 _
Oryza sativa L.LOC_Os01g55110.1RING-H2 finger protein, putative, expressed
Cucumis sativus L.Csa007972 _
Glycyrrhiza uralensis Fisch.Glyur000014s00002558.1 _
Codonopsis lanceolataCl_chr05_19840T _
Arachis hypogaea L.AH18G09960.1E3 ubiquitin-protein ligase ATL41 like

Expression pattern