| Gene ID | Annotation |
|---|---|
| Am05G021300.1 | RING 1A |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G021300.1 | mRNA | Chr05 | 129802251 | 129811857 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13923.9 | zf-C3HC4_2 | 71 | 111 | 5.90E-13 |
| PF00097.28 | zf-C3HC4 | 72 | 111 | 4.40E-09 |
| PF13639.9 | zf-RING_2 | 71 | 112 | 1.30E-07 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | RING |
| GO term | Description | Category |
|---|---|---|
| GO:0046872 | metal ion binding | Molecular Function |
| GO:0016567 | protein ubiquitination | Biological Process |
| GO:0016020 | membrane | Cellular Component |
| GO:0004839 | ubiquitin activating enzyme activity | Molecular Function |
| GO:0016746 | acyltransferase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR017907 | Zinc finger, RING-type, conserved site |
| IPR001841 | Zinc finger, RING-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR044592 | Putative E3 ubiquitin-protein ligase RING1a/b |
| trEMBL term | Description |
|---|---|
| A0A0S3SBB3 | _ |
| SwissProt term | Description |
|---|---|
| RNG1A_ARATH | Putative E3 ubiquitin-protein ligase RING1a |
| KO | Description | Enzyme |
|---|---|---|
| K10695 | E3 ubiquitin-protein ligase RNF1/2 | [EC: 2.3.2.27] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G44280 | RING 1A |
| Medicago sativa L. | MsG0280010750.01.T01 | _ |
| Oryza sativa L. | LOC_Os01g58400.2 | zinc finger C3HC4 type family protein, putative, expressed |
| Cucumis sativus L. | Csa019696 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000009s00001482.1 | _ |
| Codonopsis lanceolata | Cl_chr08_19660T | _ |
| Arachis hypogaea L. | AH08G18230.1 | Putative E3 ubiquitin-protein ligase RING1a like |