Detail information of Am05G020240.1 Annotation
Gene IDAnnotation
Am05G020240.1 RING-box 1
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am05G020240.1mRNAChr05126567067126574975+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF12678.10zf-rbx1481062.20E-25
PF12861.10zf-ANAPC11301123.20E-17
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0016567protein ubiquitinationBiological Process
GO:0061630ubiquitin protein ligase activityMolecular Function
GO:0006511ubiquitin-dependent protein catabolic processBiological Process
GO:0005634nucleusCellular Component
GO:0008270zinc ion bindingMolecular Function

InterPro
InterPro termDescription
IPR001841Zinc finger, RING-type
IPR024766Zinc finger, RING-H2-type
IPR013083Zinc finger, RING/FYVE/PHD-type

trEMBL
trEMBL termDescription
V7AH14 _

SwissProt
SwissProt termDescription
RBX1A_ARATHRING-box protein 1a

KEGG
KODescriptionEnzyme
K03868E3 ubiquitin-protein ligase RBX1[EC: 2.3.2.32]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT5G20570 RING-box 1
Medicago sativa L.MsG0480020309.01.T01 _
Oryza sativa L.LOC_Os02g47870.1anaphase-promoting complex subunit 11, putative, expressed
Cucumis sativus L.Csa012931 _
Glycyrrhiza uralensis Fisch.Glyur000878s00027528.1 _
Codonopsis lanceolataCl_chr06_08820T _
Arachis hypogaea L.AH18G07080.1RING-box protein 1a like

Expression pattern