| Gene ID | Annotation |
|---|---|
| Am05G020020.1 | Helicase protein with RING/U-box domain |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G020020.1 | mRNA | Chr05 | 125943230 | 125952690 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00176.26 | SNF2-rel_dom | 200 | 620 | 9.20E-57 |
| PF00271.34 | Helicase_C | 724 | 838 | 4.20E-15 |
| PF13923.9 | zf-C3HC4_2 | 642 | 681 | 4.20E-06 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | Others |
| Epigenetic Regulators | CHR37 |
| Transcription Factors Family | SNF2 |
| GO term | Description | Category |
|---|---|---|
| GO:0046872 | metal ion binding | Molecular Function |
| GO:0140096 | catalytic activity, acting on a protein | Molecular Function |
| GO:0016787 | hydrolase activity | Molecular Function |
| GO:0016773 | phosphotransferase activity, alcohol group as acceptor | Molecular Function |
| GO:0016301 | kinase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR027370 | Zinc finger, RING-type, eukaryotic |
| IPR017907 | Zinc finger, RING-type, conserved site |
| IPR001841 | Zinc finger, RING-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| IPR000330 | SNF2, N-terminal |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001650 | Helicase, C-terminal |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| trEMBL term | Description |
|---|---|
| A0A8B8KPY6 | _ |
| SwissProt term | Description |
|---|---|
| RHP16_SCHPO | ATP-dependent helicase rhp16 |
| KO | Description | Enzyme |
|---|---|---|
| K15083 | DNA repair protein RAD16 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G05120 | Helicase protein with RING/U-box domain |
| Medicago sativa L. | MsG0480020371.01.T01 | _ |
| Oryza sativa L. | LOC_Os08g08220.3 | EDA16, putative, expressed |
| Cucumis sativus L. | Csa001291 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000068s00006844.1 | _ |
| Codonopsis lanceolata | Cl_chr02_12870T | _ |
| Arachis hypogaea L. | AH13G15150.2 | ATP-dependent helicase rhp16 like |