Gene detail

Detail information of Am05G018610.1 Annotation

Gene ID	Annotation
Am05G018610.1	Argonaute family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G018610.1	mRNA	Chr05	120841026	120847295	+

Sequences

CDS:

>Am05G018610.1
ATGTCTCGACGCGGTGGTGGAAGGCAATCTGCGCCTAACCGTACTCAACCGTCTCCCGCATCGTCGCATCAACCAACATCAACCGATGTTTCAGGAATGGGCCGGGGACGTGGTTCTCGCGTTCCGGCTTCTTCTCCGGCGACTGCGCCTCTTACGCCGTTCGCTCCGGCGACTGCGCCTCTTGCGTCGTTCGCTCCGGCACACGCACCGTCCTCATTGTCTGCTCCGGCACCGGCGGTTGCTTCTCAATATCCCGCTGAGTCAGTTGTTTCATCAAGTTCCGCTCCTCCTCCGTCCTCTGCTTCTGTTTCCACAGAAGCTTTAACGTCCGATGTTGAGAAGAAGCTGGCGTTGCAGCCGTCTGCGCCATCGTCGTCAAAGGCTATTCGATTTCCTGACCGTCCTGGTTTTGGTAGATTGGGACGAAAAATACAAGTCAGGGCAAATCATTTTCAAGTTCAAGTTGCTGACAGGGATCTTCATCACTACGATGTATCTTTTGCTCCCGAGATTGCTTCTAAAAAAGTCTCCAGAGAGGTGATAAGTCAGTTAGTAAGAATGCATCGAGAGACAATACTGGGAAAGAGCTTACCAGCATACGATGGTAGAAAGAGTCTCTTTACAGCCGGTTCATTGCCGTTTACATCAAAGGATTTTGTTATCAAGTTGGATGAGAAGAATGAAGGAGGATCGGCGGCTTCTGGTTCTGTTGGGAAGAAACGGGAACGTGAATTTAAGGTCACGATACGGTTAGCTGCAAAGACTGACTTGCATAATCTTAACCAGTTTCTCCGACGTTTACAGCTTGAGTGCCCTCAGGAGACCATACAAGCATTGGATGTTGTTTTAAGGGCAACGGCCTCTGAACAGTATACTGTGGTGGGGAGGTCATTTTTCTCTCCCAATTTAGGCTCACCAGGGCCACTGGGCGGTGGTACAGAATTTTGGAGAGGATATTATCAAAGCCTTCGGCCAACCCAGATGGGACTTTCTCTCAATATTGATGTATCGGCAACGGCCTTCTATGAACCCATTCCTGTAATGCAATTTATTTCTAATCATTTCCAAGTCAATTTTTCAAGGCCTTTGTCTGATCAAGATCGTGTCAAGGTCAGAAAAGCATTCAGGGGAATCAGGGTAAGAGTGACTCATGGGAAGAGCATTCGAAGTTATAAGGTTACTGGCGTCACAAAAGAGCCGCTGAAAGAGTTAATGTTTACTCTTGAGGACAAAGTAACCAAAAAATCAGTTGTTCAGTATTTTCGTGAGAAATACAATATTGAGTTAAAATATTTAGCTCTTCCTGCTCTCCAGGCCGGAAGCGACACCAAACCTGCTTATTTGCCTTTGGAGCTTTGTTCGATTGAAGCTGGACAGAGGTATTCAAAGAAATTGAATGAGGACCAAGTAACTTCTCTTTTAAGGGCAACCTGTGAGCGTCCTCATGAAAGAGAAAACAAAATCAAACAGATTGTGAAGCACCACAATTTCAACACAGATGCATTCGTGCGTGAGTTTGGGATACGAGTTAGGGAGGATCCTGCATTAGTCGATGCTCGTGTTTTGCCTCCCCCTACGCTTAAATATCATGATACTGGCAAAGAATCAAGAGTTGACCCAAGGATGGGTCAGTGGAACATGATTAATAAGAAAATGGTTGATGGTGGCAAGGTGCAATATTGGGGTTGCCTTTCGTTTTCAACAAGAATTAACAGAGATTTGCCATTTCAGTTTTGTACTGAATTGGTCAAAATGTGCACTAGCAAGGGAATGCTATTCAACCGAGAGCCTTTGATACCCATAACTCAAGGTCGTCCAGATCAAATTGAAAGAGAACTTGTGGAATTTAACAAGAAGTGTCAGGCCAAACTTTTAAGTATGAATCAGGAGAAGGGTAGACTCCAGCTTTTGATAATTATTTTACCTGATGTGAAGGGGTCATACGGAAAAATAAAACTTGTATGTGAAACACAATTAGGAATAGTGTCTCAATGTTGTAATCCAAGGAATGCAACAAAGATGAACATACAATATCTTGAAAATGTGTCGCTGAAGATTAATGTTAAGGCTGGCGGTCGTAACATGGTCTTGTATGATGCAATTGAAAGAAGAATCCCTCATGTGAGTGATGTGCCAACAATCATATTAGGTGCAGATGTAACACATCCGCAACCAGGAGAAGACTCGAGTCCTTCTATAGCTGCAGTGGTGGCTTCCATGGATTGGCCTTGGGTTACGAAGTACAGGGGAATTGTTTCTGCCCAGTCTCACCGCCAAGAAATCATTCAGGATCTTTATAAAACAACTGAAGATCCTGTTAGGGGAATCGTGCAGGGTGGAATGATAAGGGAACTAATCAAAGCTTTTTATAAATCAACTGGTCAGAAGCCTAAAAGGATTATATTTTACAGAGATGGAGTAAGTGAGGGGCAATTTAGTCAAGTTTTGCTTTATGAGATGGACGCAATACGAAAGGCTTGTGCCTCATTAGAGGAGGGATACTTGCCTCCGGTTACCTTTGTGGTGGTGCAAAAAAGACATCATACCCGTCTCTTCCCTGCTGTTCACGGAAGTCGTGACCAGACTGATAAAAGTGGAAATGTAATGCCAGGAACTGTTGTAGACACGGGCATTTGTCACCCTAGAGAATTTGATTTTTATCTCAACAGCCATGCTGGGATTCAGGGTACCAGTCGACCTGCTCATTATCATGTATTGTTTGATGAAAACAAGTTCAGTGCGGATCAGCTGCAAAGTTTGACCAATAATTTGTGTTACACGTATGCAAGGTGTACGCGATCAGTTTCAATAGTTCCTCCTGCCTACTATGCACACTTGGCAGCCTTCCGAGCTCGCTACTATGTCGAAGGTGATACTTCAGATGCTGGTTCTGGAAGTGGCAGCAGGAGTACTACCACCTGCGAGGTGACATTGCCTTCGATTAAGGAAAATGTCAAAGAAGTAATGTTCTACTGTTAA

Protein:

>Am05G018610.1
MSRRGGGRQSAPNRTQPSPASSHQPTSTDVSGMGRGRGSRVPASSPATAPLTPFAPATAPLASFAPAHAPSSLSAPAPAVASQYPAESVVSSSSAPPPSSASVSTEALTSDVEKKLALQPSAPSSSKAIRFPDRPGFGRLGRKIQVRANHFQVQVADRDLHHYDVSFAPEIASKKVSREVISQLVRMHRETILGKSLPAYDGRKSLFTAGSLPFTSKDFVIKLDEKNEGGSAASGSVGKKREREFKVTIRLAAKTDLHNLNQFLRRLQLECPQETIQALDVVLRATASEQYTVVGRSFFSPNLGSPGPLGGGTEFWRGYYQSLRPTQMGLSLNIDVSATAFYEPIPVMQFISNHFQVNFSRPLSDQDRVKVRKAFRGIRVRVTHGKSIRSYKVTGVTKEPLKELMFTLEDKVTKKSVVQYFREKYNIELKYLALPALQAGSDTKPAYLPLELCSIEAGQRYSKKLNEDQVTSLLRATCERPHERENKIKQIVKHHNFNTDAFVREFGIRVREDPALVDARVLPPPTLKYHDTGKESRVDPRMGQWNMINKKMVDGGKVQYWGCLSFSTRINRDLPFQFCTELVKMCTSKGMLFNREPLIPITQGRPDQIERELVEFNKKCQAKLLSMNQEKGRLQLLIIILPDVKGSYGKIKLVCETQLGIVSQCCNPRNATKMNIQYLENVSLKINVKAGGRNMVLYDAIERRIPHVSDVPTIILGADVTHPQPGEDSSPSIAAVVASMDWPWVTKYRGIVSAQSHRQEIIQDLYKTTEDPVRGIVQGGMIRELIKAFYKSTGQKPKRIIFYRDGVSEGQFSQVLLYEMDAIRKACASLEEGYLPPVTFVVVQKRHHTRLFPAVHGSRDQTDKSGNVMPGTVVDTGICHPREFDFYLNSHAGIQGTSRPAHYHVLFDENKFSADQLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYVEGDTSDAGSGSGSRSTTTCEVTLPSIKENVKEVMFYC*

Promoter(3k):

>AM05G018610.1
GGATACGTCCCTCATCATAAAACGCTTCTGTTTCCTGTGCGAATAGCAAAAGTTAGTAGTAAGTAATTAATTTTACTTAATTGTGGAAAGTTTTGATTAACCACGTTAATTAACCCCTTGGGTTGATTGCTATCCTATTGGCTAATGGCAACTGTATTTGCTAATAGCTAGTCACATCTAGGCCAGCTAATCAATACTGTTCGCAACAAATGATCAGGGAAAAAAAATCAAAATCAAAAATAAAGAAGTGCACTAGAAAAAAAATGTGATAGTAAAATAGTGTGATCAATAATCAATAATATGATCCTTTCAAAAAAATAATCATCAGTAATTTGATAATAAAATAAATAAAAAGTGAAATATGCGAGAAAAACATAATGTAAAATTAAAATGACCTTGTACGAATATGACACTAATGTTGATTAAGTATTTTTTATAAAAAAAATAGGATAAGGGGATGACGACAAGGGTTTGAGTTAGATTAATCTCTATTTTGTGAGAAAATAGATATTTCGAGTTCATTGGACCTAGATCAGGCATGTGGCAAAAATATATCAATTGTCTGAGTACTTTTAAATCAATAATTCTTTACAAAAAGATAAAATGTACAATTGATATGGAGAATGGATGACTTAACCCTTCATCTTCACAACCCTACCCATATAAGGTCATTGCAATGGTGTCAAATTAAAGAAGAGAAAAAATAAACTTATCATAACCTATTGTGCACTAAATCGAGGCAAAGAAGCAATGTGAAATCAATAAAAAATGTTGAGCAGACAGAACAAAAATCAAAACAATGTGACAAAATGGGTAGAAATCGGAGTACCGTTGTGACCTAATCGGGCGCGACAAGGGCACATGTGCAATGAAGGGGACAAAGAGGCAACTACATGCATAAAGGCACTACTACAAAGCTTGGGGGAAGTTATGACGAAAGAGAGGAACTAGTGACATGCATGTAGTTGCCCAAATTCGATTTTGTGGTTGTGATTTCATGCAGCATCACCTCGTACATCCCTAGTGTTCATTTTGTTTCGTGAAGGGGAGAGACGATAAGTCTCAAAAAGGAAAATATGGTGTTCAAATTGCACACGATTTCAATGGTACCCTAAAAATAATACAAATTTGTCTTGTTCAACTTAGCAGAACTTTGGTTTTTTTGGTTTAGAGTTTTAGGATTTTTGATTTCTGAAAACTAGAAATGGGTTTGGTGGAAGAAGAAAGGTGTCAGAGACTAATTTGTCCCAAAATGACAAGGACTAAAATGTCCCAATACGTTATGTGCCACATAGGAGAATTAATAGACATTTTTAACTTTGAATGGATGGAGGGACTAGGGAGTCTGTCCCATTTTAAAAAGGGTTTAATTAGTGTACACATACTTTGTAAAAATTATTATACTATACACCAAAAAAAATACATGGTAAGGATAACACATCAGGTGGTTACTAATTGAGTAACTTCTTTTTAACGATGTGTCAATCTATAATTGATAGAGGGTAGTTATGCGTAGAGGATTAATGTCCCTAAAGTATTTAATGTTTTGACTATTGACACGAGACTTGGAATAAACAAGAATCAATCAATAAAAGGTTTGGCATTGGTGCGAAGTACTAGTAAATTATAAAAAGTGTTTTCTTTTTTAAAAAATGACTTGGATTCGAATTTAGGACTTTGGTTAAGGTGTAAGAGACCAAAACCATTTCATCTAAGTGCTCTTTGATAAACTATAAAAGGTAATGTAATTGAAAAAAAATACTACTACTAATTAACTTAGCATTGAGTTTGTAAAGGATGAAAAATACTACTACTAATTAACTTAGCATTATTAATAACATATCAATTTTTTTTGACAAAAAAGTAAACATATAAAAATTTATGTATTATAAATTGATGTATTTAATGAGTCAAAAATAAATTGATATATTTATAGGTTTAGTATAACAAATGTATTTAATAAGGATTGAATGCATTTATGATTCATGTTATATTTTCTTTTTTTTTAATGGAGTAATCTTCAATGAATCATTAAATTTAAAACGTTCATTAAAAAAAAATCATTAAAACGTTTTTGGTATTAATAATGAATCATTAAATTCTATATAAAAAATTAAATTTAATAGAAAAATATTACTCTCCGCTCTAAATCTTTTGATTTTTTAGCAAATGCACGTGAAATAAGAAAATGTTAATTAAGTAAAATCTAGTTTAAGGTATCCTCATTTAATATCTTGTTCTCTACAACTTTACTTTAAAAAAATGTATTTTTCATAATTAATACAACATAATTATTAAAGGTAAAGTTGGAACAAAATAGTTAAAATAACATTGACTTTATGAAACATCAAAAGTTTTAGAACAAATTTATAGGCCAAAACATCAAAAAGATTTGAAACCGACGGAATTGTATTGACAAGTAATTTATCTACGTTCTATACTAACTACTATCTCTCTGTTCTATTACCTTCAAAAAAAAAAATTTTACCCAGTTACTATTTACTGCCAGCATCAACCGATGCTTCAATAATCAATAATAACTAGTATTTTATTATAAATTCATTTCATAAATCCATTTCAACTTCAATAAAAAGAGAATTAAGCAAGTCAAAGCTTCATTATATTAAGCTTAAATTAAGCAACTTTAATACCATGATGAAGCTACTTCATTTCATAAATACATTTTTACTCAGTTATTTACTTGCCAACACCAACCGCCTGTTTCTATTTCTATAATAAAGCTAATTCATTTATTTTGCTAATCAATTGTTTTTTTTCCAGAAAATTGAAACGACTTTTGAATTTCGGACAAACAATTCCTTCCTCCACGTTCCACCAAAACGCTTACCTTGTGTGCTAAGGACTCTACTTAAAAGGCCACTCTCTCCTCCTCCCTCTCTTAAGATTCGCGCACATCATTCTCTTCGCAATCGTGGTCGCTTAAAACCTTTTCAGTCTTCACTTTCTCTTACTCCTAACCGTTTCACCACCACCTCAACA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF02171.20	Piwi	637	955	3.30E-106
PF16486.8	ArgoN	142	283	1.80E-34
PF02170.25	PAZ	369	473	2.30E-23
PF08699.13	ArgoL1	294	343	3.40E-22
PF16488.8	ArgoL2	483	529	5.50E-13
PF16487.8	ArgoMid	540	618	5.20E-09

Gene family

Gene family	Subfamily
Epigenetic Regulators	AGO5

Gene Ontology

GO term	Description	Category
GO:0003743	translation initiation factor activity	Molecular Function
GO:0004527	exonuclease activity	Molecular Function
GO:0004386	helicase activity	Molecular Function
GO:0016441	post-transcriptional gene silencing	Biological Process
GO:0006413	translational initiation	Biological Process

InterPro

InterPro term	Description
IPR012337	Ribonuclease H-like superfamily
IPR036397	Ribonuclease H superfamily
IPR032474	Protein argonaute, N-terminal
IPR032473	Protein argonaute, Mid domain
IPR003165	Piwi domain
IPR036085	PAZ domain superfamily
IPR003100	PAZ domain
IPR045246	Argonaute-like, PIWI domain
IPR014811	Argonaute, linker 1 domain
IPR032472	Argonaute linker 2 domain

trEMBL

trEMBL term	Description
A0A8B8KRD9	_

SwissProt

SwissProt term	Description
AGO5_ARATH	Protein argonaute 5

KEGG

KO	Description	Enzyme
K11593	eukaryotic translation initiation factor 2C

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G27880	Argonaute family protein
Medicago sativa L.	MsG0680034841.01.T04	_
Oryza sativa L.	LOC_Os03g58600.1	PAZ domain containing protein, putative, expressed
Cucumis sativus L.	Csa006985	_
Glycyrrhiza uralensis Fisch.	Glyur000274s00012536.2	_
Codonopsis lanceolata	Cl_chr01_24820T	_
Arachis hypogaea L.	AH13G02310.1	Protein argonaute 5 like

Expression pattern