| Gene ID | Annotation |
|---|---|
| Am05G018580.1 | _ |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G018580.1 | mRNA | Chr05 | 120595444 | 120613751 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF10475.12 | Vps54_N | 124 | 413 | 4.00E-96 |
| PF10474.12 | DUF2451 | 863 | 1093 | 1.90E-75 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0032456 | endocytic recycling | Biological Process |
| GO:0000149 | SNARE binding | Molecular Function |
| GO:0042147 | retrograde transport, endosome to Golgi | Biological Process |
| GO:0003729 | mRNA binding | Molecular Function |
| GO:0005829 | cytosol | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR019515 | Vacuolar protein sorting-associated protein 54, N-terminal |
| IPR019514 | Syndetin, C-terminal |
| IPR040047 | Syndetin |
| trEMBL term | Description |
|---|---|
| A0A1S2YKB5 | _ |
| SwissProt term | Description |
|---|---|
| VPS50_HUMAN | Syndetin |
| KO | Description | Enzyme |
|---|---|---|
| K23288 | syndetin |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT2G27900 | _ |
| Medicago sativa L. | MsG0480020674.01.T01 | _ |
| Oryza sativa L. | LOC_Os10g39910.1 | expressed protein |
| Cucumis sativus L. | Csa006976 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000274s00012539.1 | _ |
| Codonopsis lanceolata | Cl_chr06_00880T | _ |
| Arachis hypogaea L. | AH03G00400.1 | Syndetin like |