Gene detail

Detail information of Am05G018160.1 Annotation

Gene ID	Annotation
Am05G018160.1	ABC transporter family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G018160.1	mRNA	Chr05	119173253	119178771	-

Sequences

CDS:

>Am05G018160.1
ATGAACAAAAGAGAAAGACCCAATAAAATAAGAAAGGTTTCTTTTGTTACAATTGTTGTATTGTTAAGTTGCACTGTGGGGCCGAGGCTAGTTTCTTGTCAGAAAAATAAAAATGGTGGTGGTGGTGGTGGTAGTGCTGCTGGTAGTGCTGGGGCTGAAATATTTACCCAAACATTGTATAAAAGCATGTCCAATTATACTTCTGTCTTCAAAGGTGCAATAAAGAAAGAGTTGGGTTATTGCATAACTGATGTGGATGCTGATTGGGATGGGGCATTCAATTTCACCAAGGATCTCACCTTTTTGTCCATTTGTGCCCAGGAAATGAAAGGAGATATTACACAGAGAATGTGCACACAAGGAGAAATAGAAGCCTATGCAAGAAGTTTTGCTACAGGGAACAACTCTGCAGGATCAGGCAAAAAAAAAGCCAACTTCTTAAGGCCCAACGTAAATTGTAATCTGAGCTCATGGGTTAATGGGTGTGAGCCCGGATGGGGCTGTAGAGCTAATCAAAAAGTGGATCTTAACAGTAAAAAGGTGGATATACCTGTTAGATCTGTTGAATGTCAACCTTGCTGTGAAGGCTTCTTTTGCCCTCGTGGCATCACCTGCATGATACCTTGCCCTTTAGGCTCTTATTGTCCACGTGCAGAACTCAATAAAACTAGTGGAGTATGTGAACCATATCGTTATCAGTTACCTCCTGGAAAGGGTAACCATAGTTGTGGGGGAGCAGATATTTGGGCAGATATTGGGAGTAGTGGCGAGGTATTCTGTTCAGCAGGATCATTTTGTCCATCCACAATCGTAAAAAATCCTTGCCACAAGGGGTTTTATTGCAGAACAGGTTCTACTTCTCAAGAGCGGTGTTTCAGGCTAGCAAGCTGTGAGCCTAAATCAGAAAATCAAAATATTACTGCATACGGTGTCCTAGTTTTTGCTGGCTTGTGCTTCATGTTGATTATCATATACAACTGTTCTGACCAAGTTCTCGCAACTCGAGAAAGAAGACAAGCAAAATCAAGAGAAAGAGCTGCACAAAGTGTTAGAGAAACACAAGCACGTGAAAAATGGAAGTCTGCAAAAGATATTGCAAAGAAGCATGCAGTAGGATTGCAATCACAGTTATCACGTACATTTTCTCGCCAAAAAACTTCGAAAACTTCTAAACATTCAGATCCTACCTTACCACCTATGGCACCTCCTGGTACAACAAAAGGAAAGAAAAAGGATAAGAGCAACCTCACAAAAATATTAAATGATATTGAGCAAGACCCTGATAGTCAAGAAGGGTTCAATGTGCAGATAGGAGATAAAAATGTGAAAAAGCAAGCACCAAAGGGTAAGTCGTTGCATACTCAGAGCCAAGTTTTCAGGTATGCATATGGAAAGATCGAACAAGAAAAGGCTTTACAGGAACAAAATAAAAACATGACATTCTCTGGAGTGATTTCAATGGCTAGTGATATTGACATAAGGAAAAGGCCTACCATTGAGGTTGCTTTTAAAGACTTAACACTCACTTTGAAAGGTAAAAACAAACATCTATTAAGATGTGTGACTGGTAAATTGTATCCTGGTCGAGTTTCAGCGGTCATGGGCCCGTCCGGGGCTGGTAAGACAACATTTCTTTCTGCTTTAACTGGAAAAGCAACTGGATGCCACACAACTGGTCAAGTTCTTGTAAATGGCCAGGAATCCTCTATGCGGTCTTACAAAAGGATCATTGGTTTTGTGCCACAAGACGATATTGTGCATGGAAATTTGACAGTGGAGGAGAATCTTTGGTTTAGTGCCAGATGCAGACTCTCTGCTGATCTACCAAAAGAAGAGAAAGTGTTGGTGGTTGAAAGAGTCATTGAGTCCTTAGGATTGCAGGCAATAAGGGATTCTTTGGTTGGTACAGTGGAGAAGAGAGGAATCTCTGGAGGTCAAAGGAAAAGAGTAAACGTTGGATTGGAAATGGTTATGGAACCTTCCCTTCTAATTCTGGATGAACCCACATCTGGTTTGGACAGCTCATCTTCTCAGTTACTGCTTCGAGCACTTAGACGCGAGGCTCTTGAAGGAGTAAACATATGTATGGTCCTTCATCAACCAAGTTACACCCTATTTAGGATGTTTGATGATTTTATACTGTTAGCTAAAGGAGGACTTACAGTGTATCATGGACCTGTGAATAAAGTGGAAGAGTACTTCTCCAGCATGGGGATTGTTGTCCCTGACCGTGTAAACCCTCCAGATTACTACATTGACATTTTAGAAGGAATAGTAAAACCAAGTGTAAGTTCAGGAGTGAATTATAAACAATTACCAGCTAGATGGATGCTTCATAACGGGTACCCCGTGCCGATGGATATGCTATCGAGTATCGAAGGATTGGCCGCCGCAAGTGGTGATGGTTCAGCACATGGAGCAGCTAACCCTGCACAGAATGCTGATGGACCTTCTTTTGCTGGAGAACTTTGGCAGGATGTGAAGTGCAATGTTGAGATGAAGAGGGACGACCTTAAACTTAACTTCTTAAATTCAAACGATTTGTCCAACAGACACACACCCGGATCTTTCACACAGTACAAATACTTTCTTGGAAGGCAACGATTAAGAGAAGCTAGAACACAAGCTGTAGATTTTCTAATTTTGCTACTAGCTGGAGTTTGCTTAGGAACACTAGCCAAAGTGAGCGACGAATCGTTTGGAGCAACCGGTTATACATACACTGTAATAGCAGTATCACTCCTTTCCAAGATTGCGGCTTTGAGATCTTTCTCGTTGGATAAGTTGCACTACTGGAGGGAAAGCGCTTCGGGGATGAGTAGCCTTGCTTACTTTCTTTCAAAGGATACAGTTGATCATTTCAGTACAATCATCAAACCTCTGGTTTATCTCTCCATGTTTTATTTCTTCAACAATCCAAGATCATCTTTCACAGATAACTACATTGTTCTGCTATGTTTGGTGTACTGTGTCACTGGCATAGCTTATGTGTTGGCAATCTTTCTTCAACCAGGTCCAGCACAGCTGTGGTCAGTGTTACTTCCAGTAGTTTTGACCCTCGTAGCAACCTATGATAATGAAGAGGATAGCAGATATGTGAAATTTCTATCCGACTTGTGCTACACCAAGTGGGCTCTTGAAGCATTTGTAATATCAAATGCTAAAAGATATTCTGGAGTTTGGTTAATAAGTCGATGTGGTGCATTACACTCATACGGCTATGATCTCAAACATTGGTACCAATGTTTAGGACTCCTTATTGTGACTGGAATAATTAGTCGTGTTCTTGCATTTTTTTGTATGATAACCTTCCAGAAGAAATAG

Protein:

>Am05G018160.1
MNKRERPNKIRKVSFVTIVVLLSCTVGPRLVSCQKNKNGGGGGGSAAGSAGAEIFTQTLYKSMSNYTSVFKGAIKKELGYCITDVDADWDGAFNFTKDLTFLSICAQEMKGDITQRMCTQGEIEAYARSFATGNNSAGSGKKKANFLRPNVNCNLSSWVNGCEPGWGCRANQKVDLNSKKVDIPVRSVECQPCCEGFFCPRGITCMIPCPLGSYCPRAELNKTSGVCEPYRYQLPPGKGNHSCGGADIWADIGSSGEVFCSAGSFCPSTIVKNPCHKGFYCRTGSTSQERCFRLASCEPKSENQNITAYGVLVFAGLCFMLIIIYNCSDQVLATRERRQAKSRERAAQSVRETQAREKWKSAKDIAKKHAVGLQSQLSRTFSRQKTSKTSKHSDPTLPPMAPPGTTKGKKKDKSNLTKILNDIEQDPDSQEGFNVQIGDKNVKKQAPKGKSLHTQSQVFRYAYGKIEQEKALQEQNKNMTFSGVISMASDIDIRKRPTIEVAFKDLTLTLKGKNKHLLRCVTGKLYPGRVSAVMGPSGAGKTTFLSALTGKATGCHTTGQVLVNGQESSMRSYKRIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKEEKVLVVERVIESLGLQAIRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFRMFDDFILLAKGGLTVYHGPVNKVEEYFSSMGIVVPDRVNPPDYYIDILEGIVKPSVSSGVNYKQLPARWMLHNGYPVPMDMLSSIEGLAAASGDGSAHGAANPAQNADGPSFAGELWQDVKCNVEMKRDDLKLNFLNSNDLSNRHTPGSFTQYKYFLGRQRLREARTQAVDFLILLLAGVCLGTLAKVSDESFGATGYTYTVIAVSLLSKIAALRSFSLDKLHYWRESASGMSSLAYFLSKDTVDHFSTIIKPLVYLSMFYFFNNPRSSFTDNYIVLLCLVYCVTGIAYVLAIFLQPGPAQLWSVLLPVVLTLVATYDNEEDSRYVKFLSDLCYTKWALEAFVISNAKRYSGVWLISRCGALHSYGYDLKHWYQCLGLLIVTGIISRVLAFFCMITFQKK*

Promoter(3k):

>AM05G018160.1
CCAGTTCTGACCTATATATACGATGCTAAACTTATGTTATGATGTTAAACTTCTGTTTGGTTTTCAGTCATTTGATAATATGGATGAAGTTTTACATGTATGAAGTTTTTGGTATTGGAAAAGAAATTGCAATAATGTGTAATTCTGCCTTTTGTCATTGGATAATACAGAAACTTGTCTAATTTTACATGTGCGGGAGTTATTAGATTCTGCCTTTTGTCATTGGATAATATGGATGGCCATGATAATATTATGGGGAAGCATAATGGTTGAGTTGTTGTGTTCATCTTTTTGCTTCCTTGAATTGATGGATAGGTACTGTGGGCTGGTTGAACTTGTAAATTAATTCCTCTGCTGTGTAGCAAAAAGATTCATATAAGATCATGCCCAAAACAGTACACAATGTAAATTAATTCCTCAGCCAATTGTTGTTTCTGAGGTCCATATTCTGTAGTGTAGTTTAGGACTATACAATTATTGACAAATCATGAACATAACTGCATTTTTATTTTCATGAAGGTTTTAAGATCAGGAGATTTGGTTTCTTAACTGTGCTGAAGAAGGTGTGTTTGATGGTCATGGTCCTTCCACTAAAATGACATTAGTCCCCTGTGATTTCACTAAACATTGTATGCAACAACATAACAAGGCAAAACATGGCCAGTGATGCTGCATTAGTAGTTTGTTATTCATGTAGTATTTTCCTAATGTTATTACAGTTGAGAATCCTATGGACATTAGGTTGTCTTTGCTTTTTGATCTAGTAAATTGAGATGTGTGAAGGGGAAGGCTTCTTTTGGGAGTTTTGTTTGACATTACTGGATTTCTCAATTATTGCCTAAAGAGCTACAAATGTGTTTTTGCCTTTGAAGTAGATGTCATCTACACATTTTAAATTTTATTTTGATGAAGATCCTCCTTTGTTGACGTTTGTTTTTTCTTGTTAAAACTCGGGAAAATCTGGTGCACTTATTGATCTAACCATGCCTCTCTCATCTTATCTAGTAATAAAACCAGTTTTTTTTTTGCAATTGGTAATGGGTTTATTCTAGAAAAAACATGTGCAATTCTGTAAAAAACGGATCTAGCAAAAAAACGGTTCAGGTAACCAAAACCGGTTTGGAACCAATTCCAATACGCAAACCGGTTTGGAAAAGGGAAACCGGTTTAGAACCGGTTCCAAACCGAACCTAAACCAGTTTGAAGGGAAACCGGTTTTTTTATTGAAATGGTTTTCTGAACCGAACCAGACTGCATATATGGTTCGGTTTGGTGCAGTTTGTGCACCATGCACACCCTTAATGACCCGTTATTCTTCCAATGAATATGACTTGATTTAGGCTTGCGAAAGCGCTAGCCAAATTAGTTTAAGCTGAGTGTTTGGTACTACTAGTTTATAATATTTTTTTCACAAGTTTACAATGTTTTTTCGTCCTTTTTTTTCCTAATTTTATCCTTATTATTTTAATTTATTTCTCTTTTATCTTTCATTTAACGAATATTCTCTCCCACTTTTAAGTATTAATTACAAATATTTATTTATTTCATTTTGTATTTAAAATTTAACACTTTAAATTCAATTCGCTAGCTTATTTATTATCTGCTATCTGCTACTTTTTACCAAACGAAACCTTAATTTGGTCGACTTTCGATAGACTTGATTTTGCACTAAGTTAGCTTTTTAATGGGTTTCTTCACTTGGGAGGATACGGATTGAACCATTGATCTAGTTGTCAACACATTCTCATGTCCTCTGCTGTCTTGGAAGAAAACATGAGAAAATGAAAGCTAGCTCAAATATTTTTTTGTTGACAAAAAACGTGGCTCATATATTAAGTATTAATTTCACCAAAAAAAAATATTAAGTATTAATTAAAGAGCATTTTTTGTTACCGTGTTATTGGTTCGCACTATCCACCAACTTTATCGGTGAGTAACCTATACCAGGGAACATGGCTAGTCACGTGTTTACTCGCATTTGCCGGTTTGCATGGTTCCCCCCTCCCAATAGAGTTTTTGCCGTACCCAAGACTCGAACTTGAAACCTTAGGACCAGATCGAACTCAATTACCGCTCGGACCAATCATGTTGGTAATTAATGAGGAGTTTTTTTTTGGTATATCGAGGAAAAAAAGAAAAGGGTAAAAACCAAAAACTAGACTCTCAGGAACTGAACTCCACTAGCATCCGCAAGCAGTAGAGGCAAGATGCCAAGAGGAGGAGAATCAGACACTATCCATCTTTGATCCATAGAAGAACCAACCTTGGCCAGAAAATCCGCATAAGCATTACCCTCTCGGAGAGTGTGGAAAAGCTGAACAAACCAATCTCAAACCGATCCGCATAAGCATTACACCATATATGTTAATAAAGTTGTAAAATTTTATTTGGCAAAAAGACAATTTATATCAAAGGTCAAACACACACACACACACTACTAGTTAATTACATTGAAGGAAATAGTTAGAAAAAGACTCAGATAGATATATTTTTTAAAAGACCTCTAGCTTTTTTTTTGGTCAACAAAAGACCTATAGCTTTGAAACAAAAATAGGAAGCTAAATCAAGCAAACATAATGAACGAACGAGTAAAACAAAAAGAAGAAAATGTGTAGTACGGCTTGGGCCGGACCTGTTTACGAATGGATGCGACACTTGTCTTAATTGTAGCATCATCCTTGTACATATGTTTTTGTTTGATTTAATGATTGATGATATAAGCAAATGTTGCTCCCTCATACATCGCCAACTCTTCCTCCTTGCCGCCATTTCTTCATAGGAAAATGCGAAATCCCAGCTCTTGCATTTTCTCTCTCTCCCTCCCTCCCTCTCACTGCTTCTCAATCCTCCATTACCATCTTTTCCTTTCTGCTTCTCTGTTCCTCAACCTGTATTCACTATGATTCTACCCTTTTGCCTTTGATTTTCGCCCTTTCTTCTGTTATCAATAAATAAATCTACCACATTTGTAAATAAATAAATAAAAATTCTGATGCAAAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF19055.3	ABC2_membrane_7	699	1107	2.10E-217
PF00005.30	ABC_tran	521	670	1.70E-25
PF01061.27	ABC2_membrane	867	1050	6.60E-07

Gene family

Gene family	Subfamily
Transporter family	ABC

Gene Ontology

GO term	Description	Category
GO:0016020	membrane	Cellular Component
GO:0009860	pollen tube growth	Biological Process
GO:0099503	secretory vesicle	Cellular Component
GO:0005524	ATP binding	Molecular Function
GO:0015846	polyamine transport	Biological Process

InterPro

InterPro term	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR017871	ABC transporter-like, conserved site
IPR003439	ABC transporter-like, ATP-binding domain
IPR043926	ABC transporter family G domain
IPR003593	AAA+ ATPase domain

trEMBL

trEMBL term	Description
A0A396I8Y0	_

SwissProt

SwissProt term	Description
AB28G_ARATH	ABC transporter G family member 28

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G60740	ABC transporter family protein
Medicago sativa L.	MsG0780040950.01.T01	_
Oryza sativa L.	LOC_Os06g51460.1	white-brown complex homolog protein, putative, expressed
Cucumis sativus L.	Csa011890	_
Glycyrrhiza uralensis Fisch.	Glyur000093s00009382.1	_
Codonopsis lanceolata	Cl_chr04_00380T	_
Arachis hypogaea L.	AH13G02860.1	ABC transporter G family member 28 like

Expression pattern