Gene detail

Detail information of Am05G017880.1 Annotation

Gene ID	Annotation
Am05G017880.1	Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G017880.1	mRNA	Chr05	116211205	116217524	+

Sequences

CDS:

>Am05G017880.1
ATGGCTATGGCCGTGGCTCATCACAGTCACAGACAAAGCAGCAGTGGCAGTGGAAGTGGCAGCATTGACAAACACTTAGTAGACTCTGGAAAATATGTGAGGTACACTTCTGAACAAGTTGAAGCTTTGGAACGTGTTTATGCTGAGTGTCCCAAACCCAGTTCACTCAGAAGACAACAATTGATCCGAGAATGTCCCATTCTTTCCAACATTGAACCTAAACAAATCAAAGTTTGGTTTCAAAATCGTAGGTGTAGAGAGAAGCAGAGAAAAGAGGCTTCTCAGCTTCAGACTGTGAACAGAAAACTCAGTGCAATGAATAAGTTGTTGATGGAGGAAAATGATAGGTTGCAGAAACAGGTTTCACATCTTGTTTGTGAGAATGGCTACATGCGCCAGCAATTACATACTACATCAGCAGCAACTACTGATGCTAGTTGTGATTCGGTGGTTACAACTCCTCAACATTCCTTGAGAGATGCTAATAGCCCTGCTGGACTCCTATCAATTGCGGAGGAGACCTTGACGGAGTTCCTTTCAAAGGCGACAGGAACTGCTGTTGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATCTTTGCCATTTCACAAAGTTGCAGTGGAGTGGCCGCACGAGCTTGCGGGCTTGTTAGTTTAGAACCTACCAAGATTGCAGAGGTCCTTAAAGATCGTCCATGTTGGTTTCGAGAGTGTCGGAACCTAGAAGTTTTCACAATGTTTCCTGCCGGAAATGGAGGAACCGTTGAACTTCTTTACACACAAACATATGCTCCAACGACACTGGCTCCTGCCCAGGATTTCTGGACTCTAAGATACACTACAAGTTTGGAAAACGGCAGTCTTGTGGTTTGTGAGAGGTCCCTGTCTGGTTCTGGCACAGGCCCTAATCCAGCTGCTGCTGCTCAGTTTGTAAGAGCTGAAGTGCTCCCTAGTGGCTACTTGATTCGACCATGTGATGGTGGAGGTTCAATTATTCACATTGTAGACCACCTAAATCTTGAGGCATGGAGTGTGCCAGAAGTGCTGCGTCCACTTTATGAATCATCAAAGCTGGTGGCTCAAAAAATGACAATTGCAGCGCTTCGACATATTAGGCAAATAGCTCAGGAAGCAAGTGGTGAAGTAGTATATGGAATGGGTAGGCAGCCTGCCGTTTTGCGAACTTTCAGCCAAAGATTGAGCAGAGGATTCAATGATGCTGTAAATGGATTCAATGATGATGGATGGTCTATACTGAACTGTGATGGTGCTGATGATATTATCATTGCTATTAATTCAACCAAGAATTTGAGTGGAACTTCTAATCCAGCGTGTGCCCTTACATTCGTTGGAGGAATTCTGTGTGCAAAGGCTTCTATGTTGCTCCAAAATGTTCCTCCAGCAGTTTTGGTTCGCTTTCTAAGGGAGCATCGCTCAGAGTGGGCTGATTTCAATGTTGATGCCTATTCTGCTGCATCACTGAAAGCTGGAACCTATGCCTATCCAGGGATGAGGCCTACAAGATTCACTGGCAGTCAAATAATCATGCCTCTTGGCCATACAATTGAAAACGAAGAGATGCTTGAAGTTATTAGGCTTGAAGGCCACTCTCTTGCTCAAGAAGATGCTTTTGTTTCTAGGGACATTCATCTCTTACAGATATGTAGTGGAACTGATGAGAATGCTGTGGGGGCTTGCTCTGAGCTCATATTTGCTCCGATTGATGAAATGTTCCCAGATGATGCTCCATTGGTACCTTCTGGTTTCCGCATCATCCCATTGGAATCAAAACCAGGTGATAAAAAGGATGCAATGGCTTCTAGTCGGACCCTGGATTTGACATCAGGTCTTGAAGTGGGCCCAGCAACTACTCATGGTGTTGCAGACATATCATCTGGTCTTAACACTCGATCGGTGTTGACTATTGCCTTTCAGTTCCCTTTTGACAGCAGCTTGCAAGAAAATGTTGCAATCATGGCACGTCAATATGTCCGTAGCGTGATTTCCTCTGTGCAGAGGGTTGCGATGGCTATATCTCCACCAGGTATAAACCCAGCTGTTGGATCAAAACTTTCTCCTGGTTCTCCAGAAGCAGTTACACTAGCTCACTGGATCTGCCAGAGTTATAGTTGCCATTTGGGGACAGACTTACTACTGAGATCAGAATCTCTTGTTGGTGACTTGATACTGAAACAGCTGTGGCATCATCCGGATGCTATTCTATGCTGTTCACTCAAGTCTCTGCCAGTGTTCATCTTTGCAAATCAAGCTGGCCTTGACATGTTGGAAACTACTCTAGTTGCTTTACAAGACATTACATTGGATAAAATATTTGACGACTCTGGACGCAAGGCATTGTGTGCAGACTTTGCCAAGTTAATGCAACAGGGTTTTGCTTATCTGCCAGCTGGGATCTGCATGTCCACGATGGGGAGGCATGTTTCATATGAGCAAGCCATAGCATGGAAAGTGCTTACAGCAGAAGATAACACTGTTCATTGCTTAGCTTTCTCTTTCATAAATTGGTCATTTGTATGA

Protein:

Promoter(3k):

>AM05G017880.1
GTTAGCCAAACATATTCAAAACATTGGCAACCGATTCATTAGATGAGAAACTTTAAGGCGAGAAAATGTTTCATCATAAGTTTACTGAAATCGTTCAAAAATGTTTCAAACAATTTTATCTCATTTTTGCTAGCTATCCATCCCAACGATCTCACAAACTCATAATAGTGAACTCTCCTCAAACTTGTTTTTTATTTTCTCATAAGTTCCCTCTAGTTGAGTAATCCTATTCGAGACGCGTCGTCAGACACTAAATGTGGGTAGCTCTCCTAGCCAGGATTCGAACCTGATTTTACATGCGACAAAAAACGGTTTCATTAAAAAGTGGAGTATCATATTTAGTTGCCATATACTAGAATTGGAAAAACCATATTAAATATAGGTTTAAATATATATTACCCCCCTGCAAATATACCCATTATCCAGTTACCCCCCTACAAAAAAAAAACATTTAAAACAAACCTTGCAAAATATAAAGTTATCCAGTTACCCCCCTGCCGTTAAATTTTCTGTTAAAAAATGTAAAATGTCACGTATCCAGTTACCCCCCTGCCACGTGTCACCATATTATTGGGCCTCTGTGACACGTGGCACTGACTGCCACATCAGCATCCTGTGTCACCAGTGCCACGTCAGCAACCAATGGATGGCTGCCACGTGGCACTGTTGTTAATTCAAAATAAATCTTCAAAATGGCTATAGTGGGTGTTGAACCTGTGACCAACCACTCACACACACCCCCTAACCACTTAGCCACCTTATTACTTGTGATTATTAACACAACTACTAATATATATTACATCATTGATACTTAATTTAAACCCAGAAATACTGATCTTCATCTTCAACCTTGTAAACCCAGAAAATGCAGAAAAACGAAAAATCCCTGATTAAAAATCAAATGTACATAATCAGTTTTGTCCTAATTTCGTGTTCATAATCAAACTGATCGTGAACACAAACGGAAACGAAATCTGCAGATCTTCATCACTAAAGCGAAATCGAAACAGATCTGGAAAACAAAAACGAATCTGGAACAGATCTAGAAGCACTCATGTGAAACAAAAATGGAGATGGAATTGTTCCTGGGTTTCGTGGGTCTCGATTTGTGAAACTGTAAAATCAAATCAAAGATCTAATTAAAACTCAAATCTTCATAATCAAAACAAAATTGAAAACGAAATCCAATCTGATTGAATCCTTTTCTAGATCTGTTTTATATATGATTCAATTCGTTTTTATTTCATTTCGAATCTCATTTCTAGTTCAATTCGTTTTTAATTCATAATCAAAACAAAATCGAATCTCGTTTCTGGTTCGATTCGTTTTTATTTCTGGTTCAATTCGTTTTTGTTTCTCAGTGGTTTTTATTTCTGCATTTTCTGGGTTTACAAGGTTGAAGATGAATATCAGTATTTCTGGGTTTAAATTAAGTATCAATAATGTAATATATATTAGTAGTTGTGTTAATAATCACAAGTAATAAGGTGGCTAAGTGGTTAGGGGGTGTGTGTGTGAGTGGTTGGTCACAGGTTCAACACCCACTATAGCCATTTTGAAGATTTATTTTGAATTAACAACAGTGCCACGTGGCAGCCATCCATTGGTTGCTGACGTGGCACTGGTGACACAGGATGCTGACGTGGCAGTCAGTGCCACGTGTCACAGAGGCCCAATAATATGGTGACACGTGGCAGGGGGGTAACTGGATACGTGACATTTTACATTTTTTAACAGAAAATTTAACGGCAGGGGGGTAACTGGATAACTTTATATTTTGCAAGGTTTGTTTTAAATGTTTTTTTTTTGTAGGGGGGTAACTGGATAATGGGTATATTTGCAGGGGGGTAATATATATTTAAACCTTAAATATAAAATAAAGAGGTCAGATTAGTGGAGCACGACAATACTTATACTCGATAAGTTGTAGGTTCAAATTTCCACGAGTCCCATTGAAATGAGGTAAATATAATTCTCTTCGCATATGTTCAAAAAATCTAATGATTTTCCTTGTCTTGGTCCGGTCGACATCTCTTCACACGAAAATTTAATTCCTATAAAAAGCATACTAAACATAGAATAAAATATTCATATAAACAAATTCATTTAAACAAAATTTTAAAGTAACCAAATTTACTCAAAATTAATTACAGATGTGATAGAATGCTATTTCTGTTCCTTTTTATTTGTCTTTTAAGATCGTTTTTACACAAATAAATGAAACAATAAATTTTATTATTTTTAATAAAATTATTAGTCTTTTTTTAATTATACTCTTAATTATTTATCACTCATCATACTTATTTTTCTCTCTGTAATAAATAATTAAATATATAAACTTCTTCTAAAAATTGAAAATTACAAAGGAAGGAGGGAGTCCTAGAGTAGACTAGAAAAGAAAGAAAGAAAATGTTAGGAGAGGATTTGTGAAAAGATGTAGGAGTGAGGAAATATGGTGGGAGGGAAGAGTTGGTGGAGGGTGGTGTCAGTCTGTGTCTGAGGGGCATGAAATATGGTGGGGTCCAATCCAAAGATGTGAATTAGAAGGAAGAAGAAGAAGAGGGACAATGTTGTAAATGCGCCCAAAATTATAAACAAAACAAAACATTACTGCCATCTTTGTCGGTATCCCTTCTTCTATTCTCTTTAACCTTCCCTTCTTTCTTCAATCATTCTCCTTTCTCAACTTCTCTCTTTAATTTTTTATCCATCTCCAGTTGAATCGAATCTAATTGAAAAGGAAAAGCTCATAGCCACATCACCACCTTCAAATTTTCAACTCTCTCACTTTCATTTTAATATGGATATGGATTCCACTAAGCTTTGAAGATAACAATAAAAACCCGTAATTTGAAGGTGATATGGTGTTGCTGGTGGGATTGGAAGTGAAAAAAGAAGGAACAGTGGAGGGTGAAGGTTGTTTCTTACTTTCCTAGCTATTAAAAACCGATACTTTCCTCTTCATTACTATTTTCTCCAGAGAGATTTGTTGTGAGAAGC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF08670.14	MEKHLA	705	849	1.70E-49
PF01852.22	START	170	377	6.50E-46
PF00046.32	Homeodomain	31	89	1.30E-16

Gene family

Gene family	Subfamily
Transcription Factors Family	HB-WOX
Transcription Factors Family	Others

Gene Ontology

GO term	Description	Category
GO:0009944	polarity specification of adaxial/abaxial axis	Biological Process
GO:0010014	meristem initiation	Biological Process
GO:0010089	xylem development	Biological Process
GO:0010051	xylem and phloem pattern formation	Biological Process
GO:0009855	determination of bilateral symmetry	Biological Process

InterPro

InterPro term	Description
IPR023393	START-like domain superfamily
IPR002913	START domain
IPR013978	MEKHLA
IPR009057	Homeobox-like domain superfamily
IPR001356	Homeobox domain
IPR044830	Class III homeodomain-leucine zipper family

trEMBL

trEMBL term	Description
A0A8F9SJ42	_

SwissProt

SwissProt term	Description
REV_ARATH	Homeobox-leucine zipper protein REVOLUTA

KEGG

KO	Description	Enzyme
K09338	homeobox-leucine zipper protein

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G60690	Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Medicago sativa L.	MsG0480020792.01.T01	_
Oryza sativa L.	LOC_Os03g43930.2	START domain containing protein, expressed
Cucumis sativus L.	Csa015198	_
Glycyrrhiza uralensis Fisch.	Glyur000494s00017389.1	_
Codonopsis lanceolata	Cl_chr06_22710T	_
Arachis hypogaea L.	AH03G01430.1	Homeobox-leucine zipper protein REVOLUTA like

Expression pattern