Gene detail

Detail information of Am05G017750.1 Annotation

Gene ID	Annotation
Am05G017750.1	geminivirus rep interacting kinase 2

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G017750.1	mRNA	Chr05	115867335	115878726	+

Sequences

CDS:

>Am05G017750.1
ATGTTCAATAAGACTCTTTCTTTTGCCAAAGAGATGGTTTGCTGTAATTGCTTTGGGTTCATCAGTAGTCGGAACCGTCGAAGAGCTAAACCTGCAAACAATAATAATCTCTCTCGTGAACCGTTGTTGGATGATGACTTTGAAGATGATGATCAATTCAGTAATGATGAGGCTCCTGACACCTCTAGCGGAGATGAGAGTGAGGTCCAAACTCGTCCCAAGCGATCGGAAGAGGTTTTGAACTTGAGAGTAGAGAATGACATGATTTGTAGACAGTATCCTGTTAAGGAGACTAACAAAGTTGTTCGCACAGAGGATGAAAACGGAAACAAGATGATAAATGAGTATGTTCGTGAGTGTAAGATTGGCTCTGGTAGCTACGGGAAAGTGGCTCTTTATCAAAGCTCTATTGATGGGAAGCATTATGCAATTAAGGCATTTCATAAGTCTCATTTACGGAAACTTCGAGTTGCACCCAATGAAACTGCCATGACCGATGTTTTACGTGAGGTTTTCATTATGAAAATGGTGGAACATCCTAATATAGTCAATCTCATTGAGGTGATTGATGACCCAGAGTCGGATAACTTCTACATGGTACTTGAATATGTGGAAGACAAATGGGTTTGCGAGGGTTCAGGTCGTGCTTGTAGCTTAGATGAGGAGACTGCTAGGAGATACTTGCGTGATATAGTTTCTGGATTAACATATCTCCATGCTCATAATATAGTACACGGGGATATTAAACCCGACAATCTGTTGATTACACGTCATGGTAGAGTGAAGATAGGGGATTTCAGCGTCAGCCAGGCTTTTGAGAATGATAATGACGTGCTTCGAAGATCACCTGGCACTCCTGTTTTCACTGCACCTGAATGTATTTTAGGTCTTACCTACCATGGTAAAACTGCCGACACGTGGGCAGTAGGAGTTACTTTATACTGTATGATACTGGGTGAATACCCTTTTCTTGGTGATACACTTCAAGATACATATGACAGAATAGTCAATAATGTGTTAGTACTCCCGAAGGATCTGAATCTGAAGTTGAAGAACTTAATAGAAGGGCTACTTGTCAAGGACCCAAGACTACGGCTGACATTGGGTGATATCGCGGAGGATAGATGGGTTATCGGAGATGATGGGCCAATTCCCGGGTATCTTTGTTGGTGCCAAAGGAAGAATTTGGAGGGATAA

Protein:

Promoter(3k):

>AM05G017750.1
CTATAATCTACTAATCAATTCAAATAATCAATTGAAACTATGAGATAACTGCACCGATACATAAAAAACACAGGATAACTGCACTGATATATTAAAACTACTAAAATCAATCAATTTTTTCCATAAAAAATAAAATCAGTCAATTTAACCACTAACAATTGATTATTCCATTAATTTTTTTTTGGAACATATGTACTATTTTTATACGAAAATTGTTGAAACAACTTTTAAGAACAGTAGGTAATTGGAACATATGTACTATTTTTAGCCCTATTGAAGAAGATCAAAGGTTTTGGACGGCGGTGGCCGGAGCAGTCAGGAGTATATTCTGTCCGTAGTGCTTATAATCTCCTTATGAATGGTGTTTTTAGATTCCGGCAACCTTCACGCCGATGGTAATTGGCGTGCTCTTTGGAAGTTGAAGATTCCCCCTAAAGTGAAACTTTTCTTATGACGTCTTTGTCGAGATATCTTGCCTACTAGGAGTAATTTGCGACGTAGACATATTGATGTGGAAGACTCGTGCCCTTGGTGTGCATCCGGTTCAGAATCTACTATGCATCTTTTCATCTATTGTGCAAATGCTAGAGCTTGTTGGGAAAGTCTTGGGCTCTTCCCCTTGATTGTTGATATCGCTAATGATCATCATAGTTTTGGGACTGTTTTCTTTGCTGTTATTAATTCTTTTACATGTAACAATCAGGAAGCTTGGTGTATGACCTTGTGGAGCCTTTGGCAAAGTCGCAATGCTCGCATTTGGGATAATAAGCAGGATGATGCTTCGACTATTGTTTGGGCCGGAAACCATTTGCTTCAAAATTGGAAAGAGGCTCGGGGTTTTCACCCTCACTCGTGCGCTTCAGCAAATGCGTCAGGTACTACTAACGCCCCAGAGGTGTGGTCTAGGCCGAGAGAGGGCTGGTTGAAATGCAATGTGGACGCGTCCTTTTCTTTGGTATCAAATAAGGTGGGAGTTGGGATGTGCCTTCGAGACGACCGAAGTAATTTTATCAAAGCCAAAACTTTTTGCTTCTCCCCGTTCTGGATGTCATTCTAGGTGAAACAATGGGTTTGCAATATGCCAGCGAGTGGGTTCGTGAATTGGGTTTCAAGGATGTTTTGTTTGAGATGGATGCTAAGGTTGTTGTTGACGCCTTTAATTCCAAGAGCCTTTTTATTTCTGAATTTGGTTTTTTAACTAATACTTGTAAGAACATGTTTTCGTTTTTTAATTGCAACTCTCATGTTGAGTTTGCTAGGAGGAATGCTTACAAGGTTGTTTGTACTTTAGCTTACGGTGGCCTTGTTGTCAGCTAGTCCTTAGGAGAACTCTATTATTCCCTCATGTATTGATCATTTGATTATTAATGAAATGCACTAAGTGCGTATTGTCAAGACAAAAAAGAACAGTAGGTAATTTGTCAATGAGTATGTAAAGTGTTGTCATTATAGTCCCTAAATGTATAAGAATTACAAATACATTCTCAAGTGTCTCTTTAGTAAGTCATTTTAATCTTGAAATATGTTGTTTTTTATAAGCAATGTCAGTGAGGGAGGGGGGAATGTTAGTTTACTGGGTTTGAACCCGGGACCTCCTGCTTGCACTTCTTTGATGCACTCATTCGATATCCCTTAGCTCGCCAACTGAGCTACATAATTGGGATTGATCTTCAAATATGTACATTATGTTAGCCATTTTGGTGCTCAAATGTGTTTTTTTGTCAATTTAGTCCCCAAAATATTATAAAAGGACGTATTTGCAATTTTAATATATTCAGAGACTATAATGACGCCGCTTCACACCTTTAGGGATCAAAATGACGATTTACCTTTATACTTTTTTGGCTTAAATATATGTTACCCCTGTAAATATGCTCATTATCCATTTACCTCCTGCAAAAAAAACTTTTAAAATAAACATTGCAAATATTAAGTGTTACTAGTTACCCCTGCTGTTAGTTTTAGCTAACAGCGTTAAGTCTAGGCTGACTTGGCTGCCATTTGCAGGGGGTAACTAGAAATACTTAATATTTACAGGAGGTAACTAGAAACACTTAATATTTGCAGGGATAACTAGATCCCAAATGGTAGCCAAGTCAGCATAGACTTAACGCTGTTAGCTAAATGGATAATGAGCATATTTTTTTGTTTTCACTCACCGCCCTGGTTATTTAATTATATCAATATTATGATTATTATTATTATTTGATACATTGATAGATTGATTCCAAAAAAAATTATTATTTGATACATTTATTCCATTTAGGGTTTTTCGATTAGGATTCGAGTTACCAATCGGTTCTCATTTCCATTTTCGCGATCGGATTTACGAATTAGGGTTTCTGGGACTCGAAAGACCCTCGATTCGTTCTGGAATTCTATGTTTTTTTGAAGCTGGGGGTTACAGGGCTATCCCAGTTTGCCATTCTTGCCCACAAAACAAAGGTAACGTTTTGAACGTGAGAATACACCTGGCATTTTCTTTTGTTCTTGACATTTTCTGAATGTTCCATGTAAATTTGCCATCTTTATTTCTCCAATGTTCACCCATTTGTTTTATTTATTTATTTTTATCAATGGATGTGTGTGTGTCTGTGTGTGCATTTTTTTAACACTTTCCCTTTTTATGGAAAAGGTCAACGAATTGTTCGTGTGGGCTGAGAATGCAACGATAGTTATAAACTGGGGTTATCACAATGTTGGGTGTGAATTATAGTAGTGGGTTTAATATCTCAAGCCGTATTCTCCACTTAGCTGAATGGCACCCTTTAGAATAGCAGAGTTGAGTAGGGCTTGAAGCCCTCTTCCTTCCTCTGATATCAGGTAAGAACTTTCCTGATTCTGGTTGCTGAGTAATTCATCCATTTGATACGGTCATTGAATTTGAAGATCTGATATTTATATTCAATTGTGTTTTTGGCTTAATAAAATGTTTTTGTACAGTTTTTTATTTTTTTAGGCCGAGAAATACCTCAATTCCCTTTAAGGTCTAGGGTCCAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	116	377	5.40E-57
PF07714.20	PK_Tyr_Ser-Thr	120	373	2.40E-30
PF14531.9	Kinase-like	223	354	2.10E-06

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:4.2.7:CAMK_CAMKL-LKB

Gene Ontology

GO term	Description	Category
GO:0004674	protein serine/threonine kinase activity	Molecular Function
GO:0035556	intracellular signal transduction	Biological Process
GO:0005737	cytoplasm	Cellular Component
GO:0016020	membrane	Cellular Component
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain

trEMBL

trEMBL term	Description
A0A1S2YK39	_

SwissProt

SwissProt term	Description
GRIK2_ARATH	Serine/threonine-protein kinase GRIK2

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G60550	geminivirus rep interacting kinase 2
Medicago sativa L.	MsG0480020808.01.T01	_
Oryza sativa L.	LOC_Os03g50330.1	CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
Cucumis sativus L.	Csa015193	_
Glycyrrhiza uralensis Fisch.	Glyur000494s00017409.1	_
Codonopsis lanceolata	Cl_chr06_23100T	_
Arachis hypogaea L.	AH03G01520.2	Serine/threonine-protein kinase GRIK2 like

Expression pattern