| Gene ID | Annotation |
|---|---|
| Am05G017510.1 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G017510.1 | mRNA | Chr05 | 115247763 | 115250062 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13041.9 | PPR_2 | 275 | 324 | 1.60E-38 |
| PF13041.9 | PPR_2 | 311 | 359 | 1.60E-38 |
| PF12854.10 | PPR_1 | 309 | 340 | 3.50E-33 |
| PF13812.9 | PPR_3 | 264 | 320 | 1.20E-18 |
| PF17177.7 | PPR_long | 209 | 383 | 5.60E-08 |
| Gene family | Subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
| GO term | Description | Category |
|---|---|---|
| GO:0140053 | mitochondrial gene expression | Biological Process |
| GO:0005739 | mitochondrion | Cellular Component |
| GO:0005839 | proteasome core complex | Cellular Component |
| GO:0051603 | proteolysis involved in protein catabolic process | Biological Process |
| GO:0005634 | nucleus | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR002885 | Pentatricopeptide repeat |
| trEMBL term | Description |
|---|---|
| A0A1S2YK09 | _ |
| SwissProt term | Description |
|---|---|
| PP173_ARATH | Pentatricopeptide repeat-containing protein At2g27800, mitochondrial |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT2G27800 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Medicago sativa L. | MsG0480020830.01.T01 | _ |
| Oryza sativa L. | LOC_Os01g54380.1 | PPR repeat domain containing protein, putative, expressed |
| Cucumis sativus L. | Csa017200 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000325s00013499.1 | _ |
| Codonopsis lanceolata | Cl_chr02_61600T | _ |
| Arachis hypogaea L. | AH01G01920.1 | Pentatricopeptide repeat-containing protein At2g27800, mitochondrial like |