Gene detail

Detail information of Am05G017280.1 Annotation

Gene ID	Annotation
Am05G017280.1	pseudo-response regulator 7

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G017280.1	mRNA	Chr05	114322755	114331957	-

Sequences

CDS:

>Am05G017280.1
ATGAACTATAATGTTGTGAAAAGAAGTTTGGCAGAACAAAATCATATACGTAACAAAAAGAATCTCAATAATGGAGTAGTTAACAGAGGGCTAGGCTCTGAATCTTCGACTGAAAATGACACGAGATTTAGTAAGGTAACCAAAGATGGAAACAATGGGTCCAGGGGACTGATCCAAATCCACGGGAGCTTGCAGATTTCACAACCACCACATCAGGGTGCAGTTGTATGCTGGGAGAGATTTCTCCCTGTAAGATCAATAAAAGTTCTGCTGGTGGACGATGATGATTCAACACGCAATGTTGTGTGTGCTCTGTTGCGGAATTGTAGCTATGAAGTCACTGCTGTTTCCAATGGTCTTCAAGCATGGAAAATCCTAGAAGATCCAGGAAATCACATCGATCTCATTCTAACAGAGGTAGCTATGCCTATTTTATCTGGGATAGGTCTTTTGTGCAAGATCATGAGCCACAAAACTCTGAAGAATATTCCTGTGATTATGACGTCATCTCATGATTCTATGGGTATTGTCTTCAAGTGTTTGTCTAAAGGCGCAGTTGATTTTTTAGTGAAGCCTATTCGGAGGAATGAACTTAAAAACCTCTGGCAGCATGTTTGGAGAAGATGCCACAGTTCTAGTGGCAGTGGGAGTGAAAGTGGGACACACACCCGAAAATATGAAAAGTCAAGAAGCAACTGTGCAGCCGACAACAATAGTGGTAGCAGCGATGAGAATGAATATGGAAGCAGAGGCTCGAGTGTCCGAGATGGAAGTGACCAAGGAAGTGGAACTCAGAATTCACGAACTACATATCTAGCTCAAGTTGGCAGCAGCCCCCGCCCAGTTTCACCTCATAAACAATTGCGTGATGCTCCTAATAACACGTGTGCCCAAGTGAGGCATACAAAATCTGAAAAAGTTAGTAGTGTGCGGGTCCATGCCACAGAAAAAGAGTGCCATGAACTGATTGATCATCCTGATGATATTGCAATGGGTAAAGATTTGGCTATGGGAATATCATTGGATATGCAACGAGAGCAACCACTTGATGAACTGTCTAACAATCCAATGCGTAAAGGGATTAATAAGATGCCTGATGTAGATGGTATGTGGCTTGTTAAAGGACAGAGTAATGTCTGTGAAAAAGAACAACCAGAAGATGATGGTGATAAAACCAGGACACAGGAAAATCAGGCTACAAATAATGTTGATGTTACTGATCGCAGCAGTCCACAGGCTGAAAGAAGAGACTTGAAGGCTCCAGATGGATTTTCCAGTTTCGCACAAACAAAAAAAAGTTGTTGCTATATACAGCATCCATCCCTTGAACTAACTTTGAAAAGGCTGGGAGATGTAAGAGATGCTATAAATGTCACAGGTGACGAATGCAATGTTTTGAGACATTCAGATCTATCAGCATTCTCAAAATATAATACCGCTGCAGCTTACCAGGCTCAAACTGGAAATGTAGGAAGCTATTCCCCGCCAGACAATAGCTATGTTGCACCAAATACAGAAACAATACAAGACTTTCCATCTCATTCAAACGGCACTCCTCCAAATCAACAGTCTAATGGGAGCAACAACATCAATGACATTACCTCCACTAATACATATCCTAGCACCAAACCTGAATTTTTTGACAAGAAACCTGAGTCTTTAAGAGGGATTGGCTCGTTTAATTCTCCAGAAATCCGAACCATGCAGAATAGTAGCATCTCTTCTCAGAAGAAAACTTCTCCCTCAGAAGAATACGCAGAAATGATTGAAGGACAAATGGGAGGCTCTGAACAAGGATTCCAAGTTGACCACACTCACTATCAGCTTCGACAATATAATCACATCGCCCACAAGGCTGCAGTAGATCTCCTATCAGATCATGATCTCTTACTGAAAAGCACAACAAAAGCTGCTCAGCAATGTGTGTCATCAAATGCATTTGGAGGGTCAGCGGAAAGTAATGCGGCAAACTATGGTTTGGATGGAAATGCAGCTGAGAGCGGTCAAGGGAGCAATGGACAGGATGGAAGCAACACCTTGACAATCAGAACAACAAATATGGAAAACGGCAATGTGGCAAATGGGAGCTTTGGGGTTGGTGGCATTGATAGAATAGACATCGGAAGTGGGGCAGAGGAAGGACGAATTGCATTGAGAGAGGCCGCCTTGACAAAATTTCGTCAAAAGAGAAAAGAAAGATGCTTTGAGAAGAAGGTTAGATATCACAGCAGGAAAAAACTGGCAGAGCAGCGGCCACGTGTTAGGGGACAATTTGTAAAACAAAAAACGTGTGATACCAAAGAGGAAGAAAATAAAGAAAGCGACAACCTTGTATCTATGGATAATTTTAGCGATATTCCACAGTAA

Protein:

Promoter(3k):

>AM05G017280.1
TATTTTAGTCCCTACAAATATAGCAAATTTTGGTTTTAGTCTTTGTAAAAAATATTTTTTTGTTTTAGTCATTGCAAATTCCAAAACTATCACTTTTAGTCTCTCAAGTGTTTTTTGTGTTTAAAAATACTGATGTGACTTTTTTTATTACATGATTAGGGACTAAAGTAGAAAATTAGTTATATTCACACAGACTAAAATGAAAATTTATTATATTTACGAGGACTCTAAAAGAAGCTGCATCAGCTTTTTTAAACATAAAAAACACTTTTAGTACTAAAAGTGATGATTTTATAAATTGCTGAAACCAAAATTGAACAATATTTTTTACAGAATCTAAAACCAAAAATCATTATATTTACCTGGGCTAAAATTATATTTAAATCTTTTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATCAAAAGTCACCAAATCTAAATCTAAATCCCTCTTAGGCTATGTGCAATGGACCTGTTGAATTGGTTTTTCAACAGTTGAAATGCTACAGTGGTGGTGTTGAATTTACGGTTGAAAACGAGGTGGATTCACAGGAGTTGAAACAATTCAACTTGTTGAAAGGAAATTATGTGGGGTCCGCGCGGTTGAGTGGGTGTTGTGGTGGTGAGTTGTGATTGGAGGAAGGGGTGGTGGTGAGATGCATTTTAATGTTCAGCGCGTGGAGTTGAAGAAAGGAAGAGAGAGAAATAATGTGGGAGCTTCTGATTGGCTATTCAGATTTTTGAGATTTTTATCTTATCTTATCTATTTGGGGTCAATTATTTTATAGTAAATCAATTTATTTATTTTTTTTTTTTTCACCAAAATTCATCATTTTTTTTTCTCTATAAATAGAGACTTGGTTCATTTGATTTGGACACAGAAAAAAATTCGACATTTTTCTTCTAATTTTTCTATTTAGCCTTCTTTCAAGTCTTGTTTAGCTCTAAACATCTTGTTTGTGAAATGGATCCCAACAATAACCCTTTTAACACCCAAAATTCTACTAATTACCCTTTCAACTACCCAAATCCCAACAACTATAGATTTCCAATATCTCGTCTTTATTACTTGCAAGAAGGAAAATAAAATTAATTAAGAATATTAAATTACAAAAAAATTAAAATAAATTATTTAACTCTTAATTATTTTAATTTAATTTCAATCGATAATTATTATTAAAATGTAATCACAAAAAAAAACATAAAAGAAAATAAGAATATGAAATAAAAGTGGTGGGGTAGGGTGTTGAATTTTATTAAACAAAACTATTGTAGTGAGTAAAAGTTGAATGGGTGTTGAATTATTAGGTGGAAGAGAGAGAAGATGATGTGGAGTGTTAAAAAGTGAAAAAGGAGGGTGTTGAAACTTTGAGGGTGTTGAAACGACTGTAACTAGTCTTATATGTGTGAGCCACTTGGTGGATACGTAGTAGAAGATCGTAGTATTAGAGACGCAGCTTTTGATATTGTCCAGCTCACACAATCAAAGCCTCTCAAACACGCCACGTCATGCGGGCCCAACATCCCACTTGGAATTCCAAGCCATTCCCACCTTCATTTTGTCCACGTCAGCTTACTCAGAATAATATCTTCCCCCACTCCCTCTCTCTCCTTCAATCCCGTCTCCGTCTTAACCTTCTGCTTTGCTATTTCTCTACCAGTCAAGTTCTTTCCTCAGAAAATTTTCTTCTTCGGAATAAGAAAAGACTTTGAATTTGAAAGAAAATAAGAAATGTTAGAATCTTGTTTGTTTAATTTATGAATTTCTTTTATTGATTTTTCTTTTGTTTCGTTTTCTTCTATTTTCGTAATCAGATTTGGAGCTTTGACTAATGTTTTTCTTTTTGAATTATTTTTTCCAAGTTGTTGCATCGAGCTTGGGAGTGGAGGTTTGGTTCTTGTCAGTGAAGCTCTGAAGATCTGTTCACTAATTGAGTATGGTATTTGATTTCTCTAAGTCGTTCTTGTGTTGTTTTGATTATAGAAAACGCGATTTTAGATTGTAACTCTGGAATTTTTTGTTATGTTTCGTGTTCATAAGTAGAATCTTCATTGCTACATTTCTATAAGACTTGAACCTTATTTGTGTCTGAATTAGGTTTCGATCCCAATTTTTTTTGTAGTCAGTGCTAATATTTCCATGTAAATTAATCTGCGTTGGAATAATTATAATTGTTGTGCTTAATTTCTCATGAATTTTCTTTCTTTGAAAAAAATTGACTCTTCCATTTACCTGTCCTTCAGTGCATCTGGAGTTATGCAAGGTAAACGAAAGTTACTGAAATAAATTGAACTGTTTTAGATGATGTTTAGGCTATAATTTCTGAAGTTTGTATTTTGTTTGTCTTATTACATAAGATGCTAACTATTAGAATTTCTGAAGTTTGTGCTGATATTATATTCATTTATCAAGGATGGTGAGTTTTGTTATTAATTATATTTATTTATCAGGATATCGTCATGAATGGAAAGTATTACCTTGTGCTGAGATAGAAGCTTTGAGAGTTCTTTGATGCGGGAACAGGTTGTCGTTCCGTTTCATTAAATTTGCTATGAATTATTTATTTTTGAGCTTTTCATTTGTATCTGGGGGCTGGAATTTCGAGGTATGGATCTATACATTTCTATCTTAACTATTTTGAAAGCCAAATATGTTTTTATTCTATATAATCCGTCAACAATTACCATAAGCAATAAGCAGTTACTGATTTTCTCCCTATGACGTGTGTGTGTAAGTTTGATTGAGTCTCTTGGGTGGAGTATCCCCAGGTATACAGTATTTTCTCTTTTAGAATCAAGATGCTGGAAAAAGCACCAACTTGACTAATTAAAAGGATGTTTTTGCAGAAATTGATGGGCGAAGTGCTTCAGATATGGAAACTCCATGATTCACTCGACGACGGGATTGCGTTTTGGGTTTCCTTGACAATTCCTCACCGCGTTTTTTGATTGTGGTTGATATAGGCTAGTCCA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00072.27	Response_reg	89	200	5.20E-21
PF06203.17	CCT	719	761	2.60E-17

Gene family

Gene family	Subfamily
Transcription Factors Family	Others

Gene Ontology

GO term	Description	Category
GO:0048511	rhythmic process	Biological Process
GO:0016020	membrane	Cellular Component
GO:0000160	phosphorelay signal transduction system	Biological Process
GO:0009909	regulation of flower development	Biological Process
GO:0006355	regulation of DNA-templated transcription	Biological Process

InterPro

InterPro term	Description
IPR045279	Two-component response regulator ARR-like
IPR001789	Signal transduction response regulator, receiver domain
IPR011006	CheY-like superfamily
IPR010402	CCT domain

trEMBL

trEMBL term	Description
A0A8B8KMV3	_

SwissProt

SwissProt term	Description
APRR7_ARATH	Two-component response regulator-like APRR7

KEGG

KO	Description	Enzyme
K12129	pseudo-response regulator 7

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G02810	pseudo-response regulator 7
Medicago sativa L.	MsG0480020869.01.T01	_
Oryza sativa L.	LOC_Os03g17570.2	response regulator receiver domain containing protein, expressed
Cucumis sativus L.	Csa010363	_
Glycyrrhiza uralensis Fisch.	Glyur000268s00013359.2	_
Codonopsis lanceolata	Cl_chr05_37900T	_
Arachis hypogaea L.	AH13G03880.6	Two-component response regulator-like PRR37 like

Expression pattern