Gene detail

Detail information of Am05G016790.1 Annotation

Gene ID	Annotation
Am05G016790.1	63 kDa inner membrane family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G016790.1	mRNA	Chr05	112388125	112395667	+

Sequences

CDS:

>Am05G016790.1
ATGGCGAAGACACTGCTTTCGTCTCCGTCATTCATCGGCACACCGCTTCCTTCACTTCGTCGCTCTTACCCCCCTTCTCGCACCAGGCTAGTCACCAAAATTCACTTCAGTTTCAACCAACTGCCCCCAATTCAATCAATAAGCGATTCCATTGACTTCGCTGGCATCGTCACCAGAGCCGAAAGTGTTCTTTACACCCTCGCCGACGCCACCGTTGCGGCGGATTCCGCGACTTCCGCTGATGCCGCCGTCCAGAAGAACGGAGGTTGGTTTGGCTTCATCTCCGATGGCATGGAGTTCGTTCTCAAGGTGTTAAAGGGTGGTCTATCTGCCGTTCATGTGCCTTACTCATATGGATTTGCTATCATATTGCTCACTGTTATAGTCAAGGCCGCTACACTTCCCTTGACAAAGCAACAGGTCGAATCAACATTAGCTATGCAAAATCTTCAACCTAAAATTAAGGCCATTCAAGAAAGATATGCCGGCAATCAGGAAAGAATACAACTTGAGACTTCAAGACTATATAAGCAAGCTGGGGTTAACCCATTGGCTGGTTGTTTACCAACTTTGGCTACAATTCCAGTCTGGATTGGTCTCTACCAAGCTTTATCTAATGTGGCAAATGAGGGACTGTTTACAGAAGGTTTCTTTTGGATCCCTTCTCTGGGTGGTCCGACTACCATTGCTGCTAGACAAAGTGGATCCGGAATTTCTTGGCTTTTTCCATTTGTGGATGGTCATCCACCTTTGGGTTGGCAAGATACTGCAGCATATCTTGTTTTACCTCTTCTTCTTGTTGTTAGTCAATACGTTTCAATGGAAATCATGAAACCACCTCAGACGGATGATCCTACTCAAAAGAATTCACTTCTTGTTTTCAAGTTTCTTCCACTAATGATCGGTTACTTCTCACTATCTGTCCCATCAGGACTAACAATTTACTGGCTCACAAATAATGTCCTGAGCACAGCTCAACAGTTATGGCTGCGCAAGTTAGGAGGTGCAAAGCCTGTCGTTAATGAAAATGCTAGTGGAATCATTACTGCAGGACGCGCTAAAAGATCGGCTTCTCAACCAGCTAATTCTGGTGAAAGGTTTAGGCAGTTAAAAGAAGAGGAGAAGAAAAAGTTAAGTAAGGCACTGCCAGTGGATGAAGTTCAACTTCTGGCTTCTGCTTCTGATAATGGCTCGGATGTAGAAAGCGACAAGGAACAGGAAGTTGAAGAAGAAGCATATGCTTCTAAAGTTAACCAAGAGGTTCAAAGTTTCTCTAGGGAAAGAAGAAGCAAACGTTCAAAGCGGAAGAAGGCTGTATAA

Protein:

Promoter(3k):

>AM05G016790.1
GACAACTCCCCGAGGAAGGGGTCAGCCCGAGGAGCAATAAGCAAGGCCGAGGGAGAGCAAAGCCCTAACCTATAGAGTGCCACGGTCGAGGTGGGCTCGGGTGCCTGAGTTACTGTCCGAGGACGAAGGCTAGCTGAGTAAGCCAAGTGGCCGAGGTAAGGCAGGCTTGCTTGGAAGGCAAGTAAGAGGGAGCACGAAGATAGAATGTGGGAGCAGTTGAAGATCAAGCGGAGGAGCAAAGCCTTGAAGAGCGGAGTAAGGAGATTCACCCACTAACCGTGCTAGTGAGATCGTGGGTGGTTACTCTTCCTCTTTAGGGTTTAGGAACGATGATAATCGTTGATCTTAGATTGATCCAACGATAGGCAAATATTGGCTATGGTAGTGGCCTACGAGGGCCTATGTATATAAATAGAATAGCAATTGTACAGAATACACACATCAATCAATCAAAAATTCTACATTTATTTTATCTATCTGCTTTTATCGCACTTTATCCTTATTTTCATGCATTAGCCAGTAGTATAATCCAAACCTTATAGTCCCCCTCACCCAACCTGACCCTTTTTAGAGGAGTCGGGATACCCATAGTCAAGGAGTAGAGTTCCCTTCTTGGTGCAATTGCTTGAAGAACAGAGGAATCAAACACTTGTTCAAACCTCTGGTCAAACCCACGGCTAGGACCTAAGAGTTTGACACAGGACAACAGACTCATAATGTCAAAGTGACACTGCTAGGTGCCCCCCAGTATTGTGTGTTCCAGCCGATTAAGGAAACACCAACGTAAGTGAGACGTCGCGTTTGCAGATAGTAGTCTTACGTTGCCGATGTGGAACTCCTAAGTGTCGCCACACTTTGTGTTATTGGATTGGTATTCCGTTTCCATTGAATCGGCTACTTCCACTTGCCCTTTGTTGGAGGAAATGGTAAGCCGTGCGCCAAAGCCATAGTCAAAAAGTGTAGCCACCCTTGTTAGTTGACGAGGTCTCTGTTGTCATGTCATTTGGCTGCCTAATCACTATGGTAATCTGATGCATCTTCAGACACATCATAATCATCCATAGGGATTATTTCACCGTCAAATCCTTCTTGCTTCTTCTCATGAGTGAATTGTTCAATCTGAATTGCCCTGGAAATCAGGCCACAAAGGTCACTACAAGCTTGTCCCACAAGCTTCTCCTTCAATTGAGGGTGCATTCCAGAGATGGCCATGGAAGTAAGTTGAGATTCTGGGAAAGGTACTGAGCACTTTCCGTCCATCTTTCTGAATCTTTCAATAAAGTCTGTCACAACCTCATCCACCTTCTGCCGTAAATTCATGAGATCGGCAGTAGTAACTTCAGGCTGTGGCCAATAAAATCTGTCATGGAAGCACCTTTCCATGTCTGCCCAGGTCTATATAGAATCAGGTGGGAGAGAAAATACCATGAGAAGGCAGTATCTGTCAAAGACAAAGGGAACAGCTGCAACTTATGGAACTCATTCTGGTTTCCTTCCCCACATTGGGTCGTAAATCGACCGATGTGCTCCATAGTAGACTTACCATCATCCCCGGAGAATGTGGCAAAGTCAGGGTTTTTGAATCCTCCGGGCAGAGGCACCAATCTGTCCACCCATTCGGGGTAAGGCTTCTTGTACACTAGCCGGTCGAGCGGTTTCAACTGAACACCGAAAAACCTCTTGATGGTGTCAGCTATCAAATTAGGGTCCAACAGTTGGGCCCCCGATGGTCTTTCAGGTGGAGGCGTTGGTTGCCACAGTGTATCTGGGGGACCTTGCGCCCTGACTGCGGTGGTACCTGAGGTGGAGCGTTTGTCCATGGCTGCCTAGGCACTACTTGGGCCAGGTTAACAATGTCAGTTCCTGGTACAGATGCTTGCATGCCTCGGTGAGGTGGAAGTTGATTCCATGGTTGCTCGGCCGGGGCAACACCCATCTGTGTCTGTATATAGGAACCCGCCGGGTAGGTACTGAGTGCTCCGGAGTACGGCTGACTAGGAGGTAGGCTTGTCGGGCCAGGTGGGCTCTGGGCCCATGGCTGCTGACTCGGGCAATACCCACTGATGGGTGTCAATAGTATGTATATATGTATATATATATATATATGTATATGTATATTAGGTATGAGACGGGTAACCTATAGCCTGCCGGTTAACCCAAACTCGTCACAACCTGAAGTCGAGTGACCACTTGGGACAATCTCATTTGTCCATTTTTCTTATGGGTCAGGATTAAGTTTTAATCAAAACCATTAATTGGATTGAGACGAGTTTGTGGGTTGAGATGAGTCGGTGCCAATTTGTTTTAACTTTCAGGTAGTCAAGAATCAATTATGAGAGAAAAAGGAAGTCAATATAATTGAAAATCATTTTTCTTGTATTTAGTTGACAAAATCAAGACAAATAAAATTGATTTTGTGATGACTAAAATTGCTTATAAAAAAAAGACAAATAAAATTGATTTTGTGATGACTAAAATTGGTTCTAATAGAAACAAGAATTCCTAATATTTGCATTAAATAAAATCATTTTTGAGTGTGGAACTAACAACTTTTTTTATATTTACGTAAAATTAATTCTTTAAAATCCTTTTTTAAAAGCAATTCAAAAAAAAAAATCCTTTTTTAAAAATGTATTATAAAACACAAATTAATACTTTATTTTAAATTCATTTTTTAAAATTAATTCTTCCAACCCCTCAGCATTCCTTGATGGAGTACTATTATATTAGATTGACAAAAACACACTCATTAGTCATTACTCAATTAACTTTTTTTTTTGATAAACCATTACTCAATTAACTGATTTGTAATGACCTAGACCTTGTAATAATCTAATAACGTGTCACTCAGTCGCTGGCTGAAAATCTGCCACTACCCATATTGTGTGCCTTGTCCTTGCCTCGGAAAAAAGGGGGATAATTCGGAAATATCCTCTCATCTCTAAGTCTGTGACGAGAAGTTGAAGCTTGAAGCGTTTCGTGCACAAAAGCTTCTTATCC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF02096.23	60KD_IMP	118	332	9.50E-55

Gene family

Gene family	Subfamily
Transporter family	Oxa1

Gene Ontology

GO term	Description	Category
GO:0019904	protein domain specific binding	Molecular Function
GO:0070208	protein heterotrimerization	Biological Process
GO:0044743	protein transmembrane import into intracellular organelle	Biological Process
GO:0032991	protein-containing complex	Cellular Component
GO:0017038	protein import	Biological Process

InterPro

InterPro term	Description
IPR028055	Membrane insertase YidC/Oxa/ALB, C-terminal
IPR001708	Membrane insertase YidC/ALB3/OXA1/COX18
IPR047196	Membrane insertase YidC/ALB, C-terminal

trEMBL

trEMBL term	Description
A0A1S2YJU7	_

SwissProt

SwissProt term	Description
PPF1_PEA	Inner membrane protein PPF-1, chloroplastic

KEGG

KO	Description	Enzyme
K03217	YidC/Oxa1 family membrane protein insertase

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G28800	63 kDa inner membrane family protein
Medicago sativa L.	MsG0380016242.01.T01	_
Oryza sativa L.	LOC_Os01g05800.1	inner membrane protein, putative, expressed
Cucumis sativus L.	Csa020931	_
Glycyrrhiza uralensis Fisch.	Glyur000123s00008434.1	_
Codonopsis lanceolata	Cl_C14573_unscaffolded_00010T	_
Arachis hypogaea L.	AH13G04420.1	Inner membrane protein PPF-1, chloroplastic like

Expression pattern