| Gene ID | Annotation |
|---|---|
| Am05G016520.1 | RING/U-box superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G016520.1 | mRNA | Chr05 | 111420393 | 111423819 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13639.9 | zf-RING_2 | 212 | 254 | 2.70E-13 |
| PF13923.9 | zf-C3HC4_2 | 213 | 253 | 2.50E-11 |
| PF17123.8 | zf-RING_11 | 213 | 240 | 8.70E-10 |
| PF00097.28 | zf-C3HC4 | 213 | 253 | 2.60E-08 |
| PF12678.10 | zf-rbx1 | 229 | 254 | 3.10E-07 |
| PF13445.9 | zf-RING_UBOX | 213 | 251 | 2.70E-06 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | RING |
| GO term | Description | Category |
|---|---|---|
| GO:0061630 | ubiquitin protein ligase activity | Molecular Function |
| GO:0006511 | ubiquitin-dependent protein catabolic process | Biological Process |
| GO:0016020 | membrane | Cellular Component |
| GO:0016567 | protein ubiquitination | Biological Process |
| GO:0046872 | metal ion binding | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR001841 | Zinc finger, RING-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| trEMBL term | Description |
|---|---|
| A0A1S3EBE3 | _ |
| SwissProt term | Description |
|---|---|
| SDIR1_ARATH | E3 ubiquitin-protein ligase SDIR1 |
| KO | Description | Enzyme |
|---|---|---|
| K16283 | E3 ubiquitin-protein ligase SDIR1 | [EC: 2.3.2.27] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G55530 | RING/U-box superfamily protein |
| Medicago sativa L. | MsG0480021031.01.T01 | _ |
| Oryza sativa L. | LOC_Os03g16570.1 | zinc finger, C3HC4 type domain containing protein, expressed |
| Cucumis sativus L. | Csa005730 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000359s00016724.1 | _ |
| Codonopsis lanceolata | Cl_chr03_41460T | _ |
| Arachis hypogaea L. | AH18G03980.2 | E3 ubiquitin-protein ligase SDIR1 like |