Gene detail

Detail information of Am05G016210.1 Annotation

Gene ID	Annotation
Am05G016210.1	GTP-binding family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G016210.1	mRNA	Chr05	110498317	110505002	-

Sequences

CDS:

>Am05G016210.1
ATGACATCTCTTTTCCGGTTACATGTTCCCACACCCATCTCTTGCTGTACTGTCGCTAAAACCCCAAACCCCAAATTCCCACTTAACAACACTCTTCCCTTATCCCCTTCTATAATTTCCTCCCTTTCTCACCGAAAATTCATCTCACTCCCTCACCACCGGAATCTCTCCCGCTCTGTAATACGGTTTAGCGCCGGCGAATTCTCAAGCACAGTCGACGATGAACTATCAGAGGAGGAACTGGACAACCAGGTTGATTATTCAGACGATGATGATGACATTGACGTCATGGCGTTGGAGCAAGAAGCTAAGGACGCAGTACTGGAATATTCAAGTTCTCTGTCAAGCATTTTGAGTATTGATGATGAGAAAATTGATGTCAAGGAAACATCTCGAACTTCCAAGAGGAGTAAACCGAAGAAAAAAATTATCCCCGACAATCTTCTCCCAAGGGTTGCTATTGTTGGAAGACCGAATGTTGGCAAGTCAGCTTTATTCAATCGTCTTGTTGGGGGAAACAGGGCAATCGTGGTGGATGAACCTGGGGTTACCCGGGATCGTTTATATGGCCGATCATTTTGGGGACAACATGAATTCATGATGGTGGACACTGGTGGTGTTCTCACTGTTTCAAAATCACAAACTACTGTTATGGAAGATCTGGATATTACGACAACCATCGGTATGGATGGGATTCCCCTTGCATCTAGAGAGGCCGCTGTTGCCAGGATGCCATCAATGATTGAGAAACAAGCCATTGCAGCCGTGGAAGAATCATCTGTTATTATTTTCCTGGTTGATGGTCAGGCAGGTCTAACAGCAGCAGATGTAGAGATTGCTGATTGGCTGCGTAAACACTACTCAGATAAATGTCTCATTCTTGCGGTTAACAAATGTGAATCTCCACAGAAAAGACTCATGCAGGCATCTGAGTTTTGGTCCCTTGGGTTTGAACCAATTCCTATATCAGCTATATCAGGGACAGGAACTGGAGAGCTTCTTGACCTTGTTTGTTCAGAAATACTGAAAGTCGAGGAGCCGGAGAATCTCGTTGAAGAAGATTATGTTCCTGCAATTTCAATAGTTGGTAGACCAAATGTTGGTAAAAGTAGCATTTTGAATGCACTGGTTGGTGAGGACAGAACAATAGTCAGCCCCATCAGTGGCACCACGCGTGATGCTATTGATACTGAATTTATTGGAGCAGATGGTCAGAAGTTCCATCTCATTGATACTGCTGGAATCAGGAAAAGGACAGCCGTAGCCTCAGCTGGAAGTACAACAGAGGCTTTGTCAGTAAATCGAGCATTTCGTGCTATCCGTCGTTCTGATGTTGTTGCTCTTGTCGTTGAGGCCCTGGCGTGCATCACAGAACAGGACTTCAAGATAGCTGAAAGGATAGAAAAAGAAGGGAAAGGTTGTGTGATTGTTGTAAACAAGTGGGATACAATACCCAATAAAAATCAGCAGACTGCATTATTCTATGAGCAAGATGTCAGAGAGAAGCTTCGTATACTTGACTGGGCTCCAGTTGTTTATTCTACTGCATTAGCTGGTCATAATGTCGACAAGATCATTGTTGCTGCTAGTGAAGTTGAAAAGGAGAGATCAAGAAGACTAGGTACTTCTATTTTAAATCAAGTAGTGCGGGAAGCAGTAGCTTTTAAGTCTCCTCCTAGGACACGAGGTGGAAAAAGAGGGCGTGTTTACTATTGCACTCAGGCTGCTATAAGGCCGCCTACATTTGTGTTCTTTGTCAATGATGCAAAACTTTTTCCCGAGACTTATCGGCGCTACATGGAGAAGCATATGCGTAAAAATGCAGGTTTTTCTGGTACTCCCATTCGGCTTCTGTGGCGCAGCAGAAAAAAAACCGGACAAGATGAAGGCAAAGTGGGAACAAGGAATCAAGAAAAACTTGCATCACATGGTCGAAAATTGATGTCAACCACGCGTTAG

Protein:

Promoter(3k):

>AM05G016210.1
TGATCAAAGTTTTCCGGTATGTGCAAAAGCTTTAGAAATTGCTAGAATGGAAGATAAATCAAAGATTGGGAATCCAGTTAAGATAAAAGTTAAAGCTGATAACCCGCAAGAAGTGTGTGATTCTACGGAGTTGGTAAGTAAAGCCTCATAAGGGAGTAAGAAGTTCAAGAGGTGCTGTCACAGAACCGAAGAGGTAAACTTGTTGGAGGAATGCAGTTTCCATATTCCCCTGTCAAGGCTTCAGAAAATTGGCAGACAGCGACATACATATACATGTTCAAGGAAATCATGAGTGTGTTTTTTGGAGGGAGGGATGCTCCATTAAATTACAATGCAAGGAAGTTGGAGCTTCCATCATTCGAGCTTTTAAATTTAATATGTTATTCCTGGACATGGTTTAGAAGGTAGTACTTTATTGACAAGATACCTTAAGATGCTATTCAGTTCTTACCAAAAGTATTATTAAATGACTAAATTATTAATTTGGATTCACTCAATAGAAGTGTCTTGGCGCGGACGAAGTAAACCTGCATAGCATCATTTGGAAGGCTTAGCTTAAGCCTACAAAATTGTAGTTCTAATTCATACTGAGGTTGTCAAAAAGTGTCTAAAAAAGTGAAGCTTATGTAGAACAGACTCAGACTTTTTTGTGTACGGGTTTAGCTAATAACAGAAATTACTTTAACACAACAAAAAGTCAACGTTCTCACTTCATAATAAAGTAGAGATAGAACTTCATAATAAAGTAGAGTAGCAAATTACAATAATAAAGTGTATTGGCATATTAGTAGTAAGCTAAGATCATATTACATGAAAAGTTATATATAAACTAAAAACTTTAGTTCTTAAAGTGAAAACAATTCAAAAGGCAAGAGCTAATTTGACCAACATTCATAATTTTTAGACACTTTACTTTGTAGCTGATTAAAAGAAAGCAAAAATAATACAGAAAATATAAAATTAACCTTAAATTTCAATATATAATAATGCAAGATATAGGTAATTCAACCCAAGTAATCGACAATATTAATCAACAGTTTAGATATAAGTGTGGAAGTATTGACTCATAAACTTACTAGTAAATGCGAGTTTGTCGATTTTATCAAAGTCTACTCATTGTACTAATTTACCGAAAAGAGAGTTTATATGTGGTTGCAAGCTAACTTAATTTTGTGATCTAGAATCATTGCTCGTAAGATTTTAAGAATTAAGTCGATTGTTTAACAATCCTCGTGATTTCTACAATTGAATTGCTCCCGATGAGGAGTAAGTATTATAATGACTTTGAAGATATAAGTTTTTTTTATAAGCACTTTGAAGATATAAGTTAAGTTTCCACTAATGGTAGTAGTATTCTTCAAATAGGGCTAGACGCCGGAGATGAGATCAATAACATATGATCTAGACTTGAAGGAGAACTTGAGTCCATACAAGTGAAGTGAGTCACTTGAAAAAAACTACGATGTTTGCTTTAGATTCCACCACCCACTCAAACTCCTTAGAAATCTCGATAAGAAAAAGTAATAAACAAGATGATTCTATTTAGAGAAAATAAAATGGTTGTGGCTGCTAAAAGCAAACCAAGACGTGTTTAACAAGAATGCATTTCATATGCATAGGCTAGATTAGATCATAGATTTATATCCAAAATGTCATTATTAACACTAGTTCCAAGCTAGTGGGTCAATTTAAAAAAATGGTACAAAAAAGGCTCGCCATGATGAAAATGAATCCTCTCCAATCAATTTATTGTGCAGTGAAATTCTAACCATACATTGAATAAAACAAAAAGAGAAAGAAAAATATTAAAATTATGAAAAGAGGAGATTCAATTATTGAGATTTACCACCGCAAAATATCCGGTAAAAACCCTACACCTCTAGATTGAATCCCCTCCCTGCCATGGTAAAGTCTCAATTCTCAAGTAAAGAAATTACTAGCAGCCAAATTAATTATTAGAGATGTAGTATACCACATGCTCTCCAATGTTGTCCTATTCAAGAAAGATAACTAGAAGTGAAGAATGTGCTAAGACTGTAGAAATATGAACAAAGGCTATCCTAAAGCTTCTTATCATTTACTTTCTTTCATTTTTTTTTGAAGTTATTTACTTTCTTTTCTTGCATGGATACATAATATTCTTGTGAACCATTGGATTTGGTGTGGCGCTAAGGTTTATTTGGTGGAGCCGAAACGAGTATATTTTTACGAACAAAGAGTTCTTGACTGCTGGCATTCTTGGGAGGATCAGGAACACTGTGGCGAGTATTAGCGCTAGCTGGTTGAGCATTCCAAACGGAATATTTGTGATCTTGATAACAACCATCCTAATCATGTGCAATGGGTGTCTCCTAGCCGGGGCTGGGTGAAAGTGAATTGTGATGGCGCTGTCACTAACCATGGTGCCTCTGCAGCTATTGGAGGTTGTGGTAGGGATGATGAGTTTTGGCAGCTTTGTGTTTGGTTTTTCTTCATATGTTGGATTTAGCTTTGTTGTTGAAGCAGAGCTCAAAGCAATCCTTATGTGGCTGCAGAATGCTATCCGCAAAGGCTACATGAGGATTGCCATGGAATCTGATTCCATGGTAGCAGTAAAATTTCTTCAGATGGGATGCTCCTCGCAACATCCTCACTTCCGGTTGATAGAGTCTATTCGCACTTTGTTGTCGTCTTGTCCAGAAAGCTCGATTTCTCATACTCTCAGAGAGACCAATCAAGTAGCTGATGAGTTCGCCAAGCATAGTCTCTCCCTTAAGAGTGTTGTAGTCGTATTTTTTTGTAAAAAAGAAACTAAGTATAAAAACTAGAAAATATTTTCTAAAATTAGAGCAACTTTGTAAAACAAAAAAGTGCTTAATAGGAGTGGTGAAAATAAGATATTTGATTGAAACGAATTTGGTTGGCATACCGTATGGGAAAATCGGACTTGACGAGAGCATTAGAAAGAGGATAAACCCCGCCAAACGTTCAATCCTTAGTTTCACTCCACTTCCTTCCAAT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01926.26	MMR_HSR1	151	298	1.10E-49
PF01926.26	MMR_HSR1	359	480	1.10E-49
PF14714.9	KH_dom-like	539	620	1.00E-29
PF02421.21	FeoB_N	151	212	1.20E-21
PF02421.21	FeoB_N	359	525	1.20E-21

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0042254	ribosome biogenesis	Biological Process
GO:0009507	chloroplast	Cellular Component
GO:0042793	plastid transcription	Biological Process
GO:0009793	embryo development ending in seed dormancy	Biological Process
GO:0003729	mRNA binding	Molecular Function

InterPro

InterPro term	Description
IPR005225	Small GTP-binding protein domain
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR015946	K homology domain-like, alpha/beta
IPR016484	GTP-binding protein EngA
IPR032859	GTPase Der, C-terminal KH-domain-like
IPR006073	GTP binding domain
IPR031166	EngA-type guanine nucleotide-binding (G) domain

trEMBL

trEMBL term	Description
A0A1S2YMR0	_

SwissProt

SwissProt term	Description
DER_TRIV2	GTPase Der

KEGG

KO	Description	Enzyme
K03977	GTPase

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G12080	GTP-binding family protein
Medicago sativa L.	MsG0480021059.01.T01	_
Oryza sativa L.	LOC_Os11g41910.1	GTP-binding protein, putative, expressed
Cucumis sativus L.	Csa010490	_
Glycyrrhiza uralensis Fisch.	Glyur000966s00025846.1	_
Codonopsis lanceolata	Cl_chr06_03560T	_
Arachis hypogaea L.	AH02G04960.1	GTPase Der like

Expression pattern