| Gene ID | Annotation |
|---|---|
| Am05G016190.1 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G016190.1 | mRNA | Chr05 | 110483967 | 110489418 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00076.25 | RRM_1 | 11 | 79 | 3.50E-51 |
| PF00076.25 | RRM_1 | 99 | 167 | 3.50E-51 |
| PF00076.25 | RRM_1 | 216 | 279 | 3.50E-51 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0006397 | mRNA processing | Biological Process |
| GO:0003729 | mRNA binding | Molecular Function |
| GO:0005829 | cytosol | Cellular Component |
| GO:0043229 | intracellular organelle | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR035979 | RNA-binding domain superfamily |
| IPR000504 | RNA recognition motif domain |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| trEMBL term | Description |
|---|---|
| A0A8B8LJM7 | _ |
| SwissProt term | Description |
|---|---|
| R47BP_ARATH | Polyadenylate-binding protein RBP47B' |
| KO | Description | Enzyme |
|---|---|---|
| K13201 | nucleolysin TIA-1/TIAR | |
| K25102 | tRNA selenocysteine 1-associated protein 1 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G19350 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| Medicago sativa L. | MsG0280011061.01.T01 | _ |
| Oryza sativa L. | LOC_Os03g07800.1 | RNA recognition motif containing protein, putative, expressed |
| Cucumis sativus L. | Csa003144 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000004s00000449.1 | _ |
| Codonopsis lanceolata | Cl_chr07_20150T | _ |
| Arachis hypogaea L. | AH03G03250.1 | Polyadenylate-binding protein RBP47B' like |