| Gene ID | Annotation |
|---|---|
| Am05G015390.1 | Pentatricopeptide repeat (PPR) superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G015390.1 | mRNA | Chr05 | 107520577 | 107523575 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13041.9 | PPR_2 | 175 | 224 | 2.80E-170 |
| PF13041.9 | PPR_2 | 211 | 258 | 2.80E-170 |
| PF13041.9 | PPR_2 | 245 | 294 | 2.80E-170 |
| PF13041.9 | PPR_2 | 284 | 329 | 2.80E-170 |
| PF13041.9 | PPR_2 | 315 | 362 | 2.80E-170 |
| PF13041.9 | PPR_2 | 350 | 399 | 2.80E-170 |
| PF13041.9 | PPR_2 | 385 | 429 | 2.80E-170 |
| PF13041.9 | PPR_2 | 455 | 504 | 2.80E-170 |
| PF13041.9 | PPR_2 | 490 | 533 | 2.80E-170 |
| PF13041.9 | PPR_2 | 525 | 574 | 2.80E-170 |
| PF13041.9 | PPR_2 | 560 | 606 | 2.80E-170 |
| PF12854.10 | PPR_1 | 208 | 239 | 3.70E-139 |
| PF12854.10 | PPR_1 | 242 | 274 | 3.70E-139 |
| PF12854.10 | PPR_1 | 276 | 308 | 3.70E-139 |
| PF12854.10 | PPR_1 | 312 | 343 | 3.70E-139 |
| PF12854.10 | PPR_1 | 381 | 414 | 3.70E-139 |
| PF12854.10 | PPR_1 | 452 | 483 | 3.70E-139 |
| PF12854.10 | PPR_1 | 488 | 519 | 3.70E-139 |
| PF12854.10 | PPR_1 | 521 | 553 | 3.70E-139 |
| PF12854.10 | PPR_1 | 557 | 589 | 3.70E-139 |
| PF01535.23 | PPR | 145 | 173 | 2.00E-112 |
| PF01535.23 | PPR | 248 | 278 | 2.00E-112 |
| PF01535.23 | PPR | 283 | 313 | 2.00E-112 |
| PF01535.23 | PPR | 318 | 348 | 2.00E-112 |
| PF01535.23 | PPR | 388 | 417 | 2.00E-112 |
| PF01535.23 | PPR | 458 | 485 | 2.00E-112 |
| PF01535.23 | PPR | 493 | 523 | 2.00E-112 |
| PF01535.23 | PPR | 528 | 557 | 2.00E-112 |
| PF01535.23 | PPR | 564 | 593 | 2.00E-112 |
| PF13812.9 | PPR_3 | 199 | 255 | 2.70E-85 |
| PF13812.9 | PPR_3 | 238 | 289 | 2.70E-85 |
| PF13812.9 | PPR_3 | 304 | 359 | 2.70E-85 |
| PF13812.9 | PPR_3 | 374 | 434 | 2.70E-85 |
| PF13812.9 | PPR_3 | 444 | 502 | 2.70E-85 |
| PF13812.9 | PPR_3 | 513 | 570 | 2.70E-85 |
| PF17177.7 | PPR_long | 267 | 356 | 4.10E-42 |
| PF17177.7 | PPR_long | 369 | 429 | 4.10E-42 |
| PF17177.7 | PPR_long | 402 | 541 | 4.10E-42 |
| Gene family | Subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
| GO term | Description | Category |
|---|---|---|
| GO:0010019 | chloroplast-nucleus signaling pathway | Biological Process |
| GO:0003729 | mRNA binding | Molecular Function |
| GO:0009507 | chloroplast | Cellular Component |
| GO:0031930 | mitochondria-nucleus signaling pathway | Biological Process |
| GO:0004519 | endonuclease activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR002885 | Pentatricopeptide repeat |
| trEMBL term | Description |
|---|---|
| A0A371EME1 | _ |
| SwissProt term | Description |
|---|---|
| PP152_ARATH | Pentatricopeptide repeat-containing protein At2g15630, mitochondrial |
| KO | Description | Enzyme |
|---|---|---|
| K17710 | pentatricopeptide repeat domain-containing protein 1 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT2G15630 | Pentatricopeptide repeat (PPR) superfamily protein |
| Medicago sativa L. | MsG0480021176.01.T01 | _ |
| Oryza sativa L. | LOC_Os04g40130.1 | Rf1, mitochondrial precursor, putative, expressed |
| Cucumis sativus L. | Csa003158 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000065s00004302.1 | _ |
| Codonopsis lanceolata | Cl_chr04_16830T | _ |
| Arachis hypogaea L. | AH03G04460.1 | Pentatricopeptide repeat-containing protein At2g15630, mitochondrial like |