| Gene ID | Annotation |
|---|---|
| Am05G014610.1 | DNA-binding family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G014610.1 | mRNA | Chr05 | 102648701 | 102656693 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF16495.8 | SWIRM-assoc_1 | 882 | 956 | 1.80E-23 |
| PF04433.20 | SWIRM | 144 | 229 | 6.40E-23 |
| PF00249.34 | Myb_DNA-binding | 364 | 406 | 5.70E-13 |
| PF00569.20 | ZZ | 306 | 341 | 3.90E-09 |
| Gene family | Subfamily |
|---|---|
| Epigenetic Regulators | CHB3 |
| GO term | Description | Category |
|---|---|---|
| GO:0080090 | regulation of primary metabolic process | Biological Process |
| GO:0003677 | DNA binding | Molecular Function |
| GO:0016020 | membrane | Cellular Component |
| GO:0004672 | protein kinase activity | Molecular Function |
| GO:0005524 | ATP binding | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR043145 | Zinc finger, ZZ-type superfamily |
| IPR000433 | Zinc finger, ZZ-type |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR007526 | SWIRM domain |
| IPR032451 | SMARCC, C-terminal |
| IPR001005 | SANT/Myb domain |
| IPR017884 | SANT domain |
| IPR041984 | Rsc8/Ssr1/Ssr2, zinc finger, ZZ-type |
| IPR017930 | Myb domain |
| IPR009057 | Homeobox-like domain superfamily |
| trEMBL term | Description |
|---|---|
| A0A1S2YNH4 | _ |
| SwissProt term | Description |
|---|---|
| SWI3D_ARATH | SWI/SNF complex subunit SWI3D |
| KO | Description | Enzyme |
|---|---|---|
| K11649 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT4G34430 | DNA-binding family protein |
| Medicago sativa L. | MsG0480021238.01.T01 | _ |
| Oryza sativa L. | LOC_Os03g51220.1 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed |
| Cucumis sativus L. | Csa021289 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur001117s00026957.1 | _ |
| Codonopsis lanceolata | Cl_chr04_28850T | _ |
| Arachis hypogaea L. | AH03G04940.1 | SWI/SNF complex subunit SWI3D like |