| Gene ID | Annotation |
|---|---|
| Am05G013850.1 | NOP56-like pre RNA processing ribonucleoprotein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G013850.1 | mRNA | Chr05 | 99475672 | 99479780 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF01798.21 | Nop | 166 | 394 | 9.40E-81 |
| PF08156.16 | NOP5NT | 2 | 66 | 1.60E-17 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0170049 | box C/D RNP complex | Cellular Component |
| GO:0030515 | snoRNA binding | Molecular Function |
| GO:0032040 | small-subunit processome | Cellular Component |
| GO:0005730 | nucleolus | Cellular Component |
| GO:0003677 | DNA binding | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR045056 | Nucleolar protein Nop56/Nop58 |
| IPR012974 | Nucleolar protein 58/56, N-terminal |
| IPR012976 | NOSIC |
| IPR042239 | Nop, C-terminal domain |
| IPR036070 | Nop domain superfamily |
| IPR002687 | Nop domain |
| trEMBL term | Description |
|---|---|
| A0AAN9K951 | _ |
| SwissProt term | Description |
|---|---|
| NOP5A_ARATH | Probable nucleolar protein 5-1 |
| KO | Description | Enzyme |
|---|---|---|
| K14565 | nucleolar protein 58 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G27120 | NOP56-like pre RNA processing ribonucleoprotein |
| Medicago sativa L. | MsG0480021288.01.T01 | _ |
| Oryza sativa L. | LOC_Os03g22740.1 | nucleolar protein NOP5-1, putative, expressed |
| Cucumis sativus L. | Csa006698 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000017s00002383.1 | _ |
| Codonopsis lanceolata | Cl_chr06_17060T | _ |
| Arachis hypogaea L. | AH13G07600.1 | Probable nucleolar protein 5-2 like |