| Gene ID | Annotation |
|---|---|
| Am05G012470.1 | RING/U-box superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G012470.1 | mRNA | Chr05 | 94702234 | 94711033 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13923.9 | zf-C3HC4_2 | 242 | 279 | 2.50E-10 |
| PF13639.9 | zf-RING_2 | 241 | 280 | 1.90E-09 |
| PF00097.28 | zf-C3HC4 | 242 | 279 | 3.30E-08 |
| PF13920.9 | zf-C3HC4_3 | 241 | 284 | 8.80E-08 |
| PF14634.9 | zf-RING_5 | 242 | 281 | 1.90E-07 |
| PF13445.9 | zf-RING_UBOX | 242 | 277 | 1.60E-06 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | RING |
| GO term | Description | Category |
|---|---|---|
| GO:0006511 | ubiquitin-dependent protein catabolic process | Biological Process |
| GO:0046872 | metal ion binding | Molecular Function |
| GO:0032183 | SUMO binding | Molecular Function |
| GO:0016020 | membrane | Cellular Component |
| GO:0016301 | kinase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR017907 | Zinc finger, RING-type, conserved site |
| IPR001841 | Zinc finger, RING-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| trEMBL term | Description |
|---|---|
| A0AAN9K9W5 | _ |
| SwissProt term | Description |
|---|---|
| RNF4_MOUSE | E3 ubiquitin-protein ligase RNF4 |
| KO | Description | Enzyme |
|---|---|---|
| K22651 | E3 ubiquitin-protein ligase RNF4 | [EC: 2.3.2.27] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G48655 | RING/U-box superfamily protein |
| Medicago sativa L. | MsG0480021417.01.T01 | _ |
| Oryza sativa L. | LOC_Os01g69040.1 | zinc finger, C3HC4 type domain containing protein, expressed |
| Cucumis sativus L. | Csa013438 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000077s00006709.1 | _ |
| Codonopsis lanceolata | Cl_chr06_34080T | _ |
| Arachis hypogaea L. | AH03G05580.1 | E3 ubiquitin-protein ligase TRIM21 like |