| Gene ID | Annotation |
|---|---|
| Am05G012420.1 | Pentatricopeptide repeat (PPR-like) superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G012420.1 | mRNA | Chr05 | 94588228 | 94591137 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13041.9 | PPR_2 | 165 | 211 | 2.60E-164 |
| PF13041.9 | PPR_2 | 200 | 246 | 2.60E-164 |
| PF13041.9 | PPR_2 | 250 | 284 | 2.60E-164 |
| PF13041.9 | PPR_2 | 270 | 319 | 2.60E-164 |
| PF13041.9 | PPR_2 | 305 | 353 | 2.60E-164 |
| PF13041.9 | PPR_2 | 340 | 389 | 2.60E-164 |
| PF13041.9 | PPR_2 | 375 | 424 | 2.60E-164 |
| PF13041.9 | PPR_2 | 410 | 459 | 2.60E-164 |
| PF13041.9 | PPR_2 | 446 | 493 | 2.60E-164 |
| PF13041.9 | PPR_2 | 480 | 529 | 2.60E-164 |
| PF13041.9 | PPR_2 | 515 | 558 | 2.60E-164 |
| PF12854.10 | PPR_1 | 195 | 224 | 1.00E-130 |
| PF12854.10 | PPR_1 | 229 | 263 | 1.00E-130 |
| PF12854.10 | PPR_1 | 268 | 299 | 1.00E-130 |
| PF12854.10 | PPR_1 | 302 | 333 | 1.00E-130 |
| PF12854.10 | PPR_1 | 337 | 367 | 1.00E-130 |
| PF12854.10 | PPR_1 | 372 | 403 | 1.00E-130 |
| PF12854.10 | PPR_1 | 407 | 439 | 1.00E-130 |
| PF12854.10 | PPR_1 | 441 | 473 | 1.00E-130 |
| PF12854.10 | PPR_1 | 477 | 509 | 1.00E-130 |
| PF12854.10 | PPR_1 | 512 | 543 | 1.00E-130 |
| PF01535.23 | PPR | 273 | 303 | 6.60E-94 |
| PF01535.23 | PPR | 308 | 337 | 6.60E-94 |
| PF01535.23 | PPR | 343 | 370 | 6.60E-94 |
| PF01535.23 | PPR | 378 | 408 | 6.60E-94 |
| PF01535.23 | PPR | 413 | 443 | 6.60E-94 |
| PF01535.23 | PPR | 448 | 478 | 6.60E-94 |
| PF01535.23 | PPR | 483 | 512 | 6.60E-94 |
| PF01535.23 | PPR | 518 | 548 | 6.60E-94 |
| PF13812.9 | PPR_3 | 153 | 207 | 3.70E-73 |
| PF13812.9 | PPR_3 | 187 | 241 | 3.70E-73 |
| PF13812.9 | PPR_3 | 260 | 316 | 3.70E-73 |
| PF13812.9 | PPR_3 | 331 | 388 | 3.70E-73 |
| PF13812.9 | PPR_3 | 399 | 455 | 3.70E-73 |
| PF13812.9 | PPR_3 | 468 | 527 | 3.70E-73 |
| PF17177.7 | PPR_long | 260 | 349 | 9.90E-34 |
| PF17177.7 | PPR_long | 353 | 489 | 9.90E-34 |
| Gene family | Subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
| GO term | Description | Category |
|---|---|---|
| GO:0010019 | chloroplast-nucleus signaling pathway | Biological Process |
| GO:0009507 | chloroplast | Cellular Component |
| GO:0031930 | mitochondria-nucleus signaling pathway | Biological Process |
| GO:0004519 | endonuclease activity | Molecular Function |
| GO:0016020 | membrane | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR002885 | Pentatricopeptide repeat |
| trEMBL term | Description |
|---|---|
| A0A1S2YJJ7 | _ |
| SwissProt term | Description |
|---|---|
| PPR27_ARATH | Pentatricopeptide repeat-containing protein At1g09820 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G09820 | Pentatricopeptide repeat (PPR-like) superfamily protein |
| Medicago sativa L. | MsG0480021489.01.T01 | _ |
| Oryza sativa L. | LOC_Os10g34310.2 | PPR repeat containing protein, expressed |
| Cucumis sativus L. | Csa013812 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000077s00006715.1 | _ |
| Codonopsis lanceolata | Cl_chr07_09290T | _ |
| Arachis hypogaea L. | AH03G05530.2 | Pentatricopeptide repeat-containing protein At1g09820 like |