Gene detail

Detail information of Am05G012260.1 Annotation

Gene ID	Annotation
Am05G012260.1	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G012260.1	mRNA	Chr05	93401831	93420300	+

Sequences

CDS:

>Am05G012260.1
ATGGCAGAATTATCTTCAACCTCAGACAAGAAAACCTTCTTCAGAAAATTACAGGCAACCTTATCTGAATCAGACATTAACCAAGAAGACAAGTCATCTGAAGGATATTTTGAGTTGTTTCGTTTTGGAGCTGGGTTAGGGCACAATAAGAGTTGTAGAAAGTCACTAATTTCAATGTACTTTAGGAGAATAAAGTGTAGAGATCGGAGATGGGCATTGTTGTTGCAGCCATCGAAATACTTACTTAGGCCAAAATTACCTGATCATTTTTCCCTTCAATCTTTGTCACGTAAGACGACCGTGAAAGAATACACTTCACATGGAAGTATCACCAGAAGACATCTTTTAGGTTCAAATTTATCTAGACATAGTTTTACTGGTCTGAACAAAAGGCCTAGTTTTTGTCTTAAGAGTACTCAGTTACATGATTATAGTTCTGAAAGTGATGGAAGAAATGCGAGCGAGAATAAACATGTACATGTTAATGACGGAGCTAATCTTGATAAGGGAAAGAATCAACAAGAGAAGTTAGCGGAAGATGTTAAGCATTGCAATGCACATGCGCGACTTGGAGAACAGGATCAACAGGAATGGCTTAATAATGAGAAGCTTTCCGTAGAATTTAAAAGGAGAGTGTCGCCGTTTTTGACAAGAAGAGACAAGTTTAAAAATGAGCTTCTCAGAAGAATTGTTCCCTGGGATAAAATAAACATTACTTGGGACACATTTCCTTATCACATCCATGAGCATACCAAAAATCTTCTTGTGGAATGTGCTGCTTCCCATTTGAGACATAATAAGTTTGCTTCGTCTTATGGCACTCGCCTTACATCTTCAAGTGGAAGAATATTGCTTCAGAGCATTCCTGGCACTGAGCTATATCGTGAAAGATTAGTTAGAGCTCTTGCACAAGATTTACAAGTTCCTTTATTGGTGCTTGATAGCAACATACTTGCTCCTTATGATGTTGATGATGAATCCTCGGACTATGAGTCTAATGATGAAAATGCAGAATCTGGGGAAGAGGCTTCTCTAGAGTCAGAGAATGAGGATGATAACAATGCTAGCAATGAAGAAGAGTGGACTAGCAGCGCGGAAGCAAAGTCAGATGCAAGTGATAACGAAGATGCATTAGCATCTGCTGAAGCAGCCCTTAAGAAGGTTAAAGCGGCTGTTCAGAAACTTGTCCCTTACAACATTGATGATATAGAGAAGATTGTGACTGTAGAATCTGAGAGTTTCGAGTCATCTGATAAATCTGGATGTCAGCTAAGAAAAGGTGACCGTGTGAAATACATTGGTCCGTCAGTTCAAGTTACAGCTGATGATAGGCCTTTAGCAAATGGTCAAAGAGGAGAGGTGTACGAGGTTAATGGAGATAGTGTTGCTGTCATCTTAGATATTAATGAAGATAGGGCCAAAGAGCGTGAGGCGGAGAACCTTACTAAGGATATTACAAAACCACCAATTTATTGGATACATGTTAAGGACATTGAGAATGATCCTGATGCTCAATCACAGGATTGTTACATAGCAGTGGAGGCTTTATGTGAGGTTTTGCATTCCAGACAACCTCTTATTGTCTATTTTCCAGACAGTTCACAATGGTTGCATAAGTCAGTTCCTAAGTCAAGCCGAAATGAGTTTTTTCACAAAGTTGAAGAGATGTTTGACCAGTTGTCTGGCCCCATAGTATTGATTTGTGGGCAAAACAAAATTCAGTCAGGATCAAAGGAGAAAGAAAAATTTACAATGGTACTTCCAAATTTTGGACGTCTTGCTAAGCTGCCTCTTTCATTGAAGCGTTTGACAGAGGGATTTAAAGGTGAAAAGACATCAGACGATGACGAAATTAACAAGCTCTTCTCTAATGTTTTGTGTATACATCCACCTAAGGATGAAAATGTACAGACAGTATTCAAAAAACAACTTGAGGAAGACAGAAAAATTGTGATTTCACGTAGTAATTTGAATGAACTACGAAAGGTTCTCGAAGAACATCAGCTATCATGTACAGACCTTCTGCATGTAAATACTGATAGCATCATTTTGACAAAGCAAAAAGCTGAAAAAGTGGTCGGGTGGGCCAAAAATCATTACTTGTCATCATGCCTGCATCCTTCTATTAAAAGCGACAAATTGTGCCTACCTCGTGAAAGTCTTGAAATTGCAATCTCAAGGTTAAAAGGGATGGAAACTATGTCACGAAAACCTTCTCAGAACCTCAAGAATCTTGCAAAGGATGAGTTCGAGAGCAATTTCATTTCATCTGTAGTAGCTCCTGGTGAAATTGGAGTGAAATTTGATGACATAGGTGCTCTTGAACATGTCAAGAAAGCACTTCATGACCTTGTTATTCTTCCAATGAGAAGGCCCGAGCTCTTCTCTCATGGAAACCTATTGCGGCCCTGCAAAGGAATATTGCTGTTTGGTCCTCCTGGAACTGGGAAAACCCTTCTGGCCAAGGCACTTGCAACAGAAGCTGGTGCAAATTTTATCAGCATAACTGGTTCGACCCTTACTTCGAAGTGGTTTGGAGATGCTGAAAAACTAACGAAAGCGCTTTTCTCATTTGCTAGCAAGCTTGCACCTGTCATTATATTTGTTGATGAAGTTGACAGTTTGCTTGGTGCTCGAGGTGGTTCTTTTGAGCATGAGGCCACTAGACGAATGAGGAACGAGTTCATGGCAGCGTGGGACGGATTGAGGTCAAAAGAGAACCAAAGAATCCTCATTCTTGGTGCAACAAACCGGCCATTTGATCTTGATGATGCTGTTATTCGTCGTTTACCAAGAAGGATATATGTTGATTTACCAGATAGTGAAAATCGAATGAAGATTTTAAGAATATTTCTTGCACGCGAAAATTTGGATCCTGATTTTGAGTTTGACAAACTTGCTAATTTGACTGAAGGATACTCTGGCAGTGATTTGAAGAACCTGTGTGTTGCTGCAGCATATAGACCTGTTGAAGAGCTCTTAGAGGGAGAAAAGAAGGGAGGCAATAGCGATACAACTTCAGTATTAAGGCCTCTTAATTTGGATGATTTTGTTCAGTCAAAATCCAAGGTGGGTCCATCTGTTGCATATGATGCAACAAGCATGAATGAGTTGAGGAAGTGGAATGAAATGTATGGCGAAGGCGGTAGTAGGACAAAATCACCATTCGGATTTGGGAGCTGA

Protein:

>Am05G012260.1
MAELSSTSDKKTFFRKLQATLSESDINQEDKSSEGYFELFRFGAGLGHNKSCRKSLISMYFRRIKCRDRRWALLLQPSKYLLRPKLPDHFSLQSLSRKTTVKEYTSHGSITRRHLLGSNLSRHSFTGLNKRPSFCLKSTQLHDYSSESDGRNASENKHVHVNDGANLDKGKNQQEKLAEDVKHCNAHARLGEQDQQEWLNNEKLSVEFKRRVSPFLTRRDKFKNELLRRIVPWDKINITWDTFPYHIHEHTKNLLVECAASHLRHNKFASSYGTRLTSSSGRILLQSIPGTELYRERLVRALAQDLQVPLLVLDSNILAPYDVDDESSDYESNDENAESGEEASLESENEDDNNASNEEEWTSSAEAKSDASDNEDALASAEAALKKVKAAVQKLVPYNIDDIEKIVTVESESFESSDKSGCQLRKGDRVKYIGPSVQVTADDRPLANGQRGEVYEVNGDSVAVILDINEDRAKEREAENLTKDITKPPIYWIHVKDIENDPDAQSQDCYIAVEALCEVLHSRQPLIVYFPDSSQWLHKSVPKSSRNEFFHKVEEMFDQLSGPIVLICGQNKIQSGSKEKEKFTMVLPNFGRLAKLPLSLKRLTEGFKGEKTSDDDEINKLFSNVLCIHPPKDENVQTVFKKQLEEDRKIVISRSNLNELRKVLEEHQLSCTDLLHVNTDSIILTKQKAEKVVGWAKNHYLSSCLHPSIKSDKLCLPRESLEIAISRLKGMETMSRKPSQNLKNLAKDEFESNFISSVVAPGEIGVKFDDIGALEHVKKALHDLVILPMRRPELFSHGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGSFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDSENRMKILRIFLARENLDPDFEFDKLANLTEGYSGSDLKNLCVAAAYRPVEELLEGEKKGGNSDTTSVLRPLNLDDFVQSKSKVGPSVAYDATSMNELRKWNEMYGEGGSRTKSPFGFGS*

Promoter(3k):

>AM05G012260.1
GACGGGGGCGTGACCTTGCTCCTACGTATCTCTTGGTAGAGAATCAAAGGCTACGTAGATCTAAAAAAATATTTGTAATTTGATTGGTTTTAAACTTTGGAAGAGGTTTAATATCACCAAGTTGTACAACTCGGGAATCTTAAACCGAGACCGACGAGATGTCACATCTCCGCCTATCCCATATTTTTGGTATTTTTATGAGGAAAAGAAAAGGAGAAAAATATTTTTATGCGAACTAACATTTATTTTCGTTTTTGAAGAATGATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAGTAAAAATGAAACAAAACTAGTAATGGGGATGGGTGCAGAAGCGAAATAAAGAGGGTGTGAATAGCTAAAGCCCTATTTTGCTTTCAGTTTTTTTTTGGCTGCCAAACCCATGAAATCAAAGCCTTATGGAGGGGGGTTGTTTCATTGAAAGGGGGTGTGAAGAAAAAAGTGGGACTTCTTTTTCTATTTACAGCGACGCTGCCTTCATTGCTTTCTTGTTCAACCTTATTAATAAGTTTTTTTTTACATTGCTTTAGAGACACATCTGATTGATAAGTGATAAGATAAAAATAAATAAAAAACTAAAATGAACAATAAATAAAAGGGAATAAGGGAGCATATATAAGGAAACGTGAAGAGGATGTGGGAACCCTAAAATCATTTCAGCCGTAGCAACAGATACCGAAAGAGGAAAAAACGATGCTTGGAGAGAGAAAGAAGAAAAAAACGTAAAATGAGAGAGAGGTGGGGAGAGAAGAAAAGCTTAGATCCAGGGAGAGTGAGGATGAGCTCGAAAATGGAGGAGAGGTGTACGGCGCCGGTGGTGGGGATATACAGCGACGTGGTGGTGTACTGGTGTACGGCGCCGGTGGTGGGGATATACAGCGACGTGGTGGTGTACGGCGACGTGGTGGGGGTGGAGTTCTCTTCTCAAAAACACCCCTAGTGAATTTCAACACATTATGAATGACATATTCAATGATTATCAGAAGTTCACCATAGTCTATTTAGACGATGTTTTAGTTTTTTCTAATTCAATAAATCAACACTTTGAGCATCTTGATAGATTCTTTAAGATCATTAAAGATAGCGGTCTAGTAGTTTCAGCAAGGAAGATGAAACTATTTCAAGCTAACGTTAGGTTCTTAGGTTTTAGCATTTACCAGGGTATGATCACCCCCATTAGCAGGGCTATAGAATTTGGAGAAAAATTTCCAAATGAATTAAAGGATAAGACCCAGTTACAGAGGTTTCTGGGATGTGTAAATTATGTAGCAGACTTTATCCCCAACCTCAGAACAATATGCCTACCTCTCTTCAAAAGACTCAAAAAGAACCCTCCTCCATGGGATGAGTCCATGAGTGAGAGTGTTAAAACATTAAAGGGCATAGTTAAGAAGCTGCCATGCTTAGGAATCCCAGATCCCCAAGCTTCCTTGATAGTAGAAACTGATGCATCAGGGTTAGGGTATGGGGGAATATTAAAACAAATACTACCAGGGAGTCAAAAGGAACAGGTAGTCAGATACTACTCTGGAACCTGGAATACGGCCCAGTTAAAATATAGCACTACTAAACAAGAAATTTTAACTATAGTTTTTTGCATTACAAAATTTCAAGATGATTTGTTTTACAAAAAATTTCTTTTAAAAACAGATTGCAAAGCAGCAAAAGATGTTCTTCAAAAGGATGTTAAAAACCTAGTTTCAAAACATATATTTGCCAGATGGCAATCATTACTTTCGTGTTTTGAGTTCGATATAGAACATATTAAAGGAGAAAAGAATTCTTTACCAGACTTTCTTACCAGAGAATTTTTACAGGGAAGAACATGAGTCGGAGTAAGGATAAATACGGGCCTCCTCAGGAGGACCCCAAAAGCATTAAAGAAAAAGGTACTTCTTCAAAGCAAGTCATTACTGCCAAGCAGGTATTACAATCCCCTTCACCTTCAAAACAGAACCAAAACAGGTTCACTCCATTAACTCCATTAGCATTACCTTCCTTCTACCCTAGGGCCCCTACAGGTACACCTAGAACATTAATGCCACCCTTACAATCCCAGATAGTCTCCCCCTCAACCTTTTATGCATTAAGAGCCTCTTCTTCCTTCAATAACTCAGTTAAGCCATTACCCTTCTATACACCTCCATCAGATTTGCCAAGCCCTTACATAGACAAAAACTATAAAAAGATATTATTCCTAGTAGAGCCCGAATACCAAAAGGAAACCATTAGACAGATTATCCCTAGTTTCTTTCCCCCTGGCTTTCACTTTCTCCCTCAAACATTAGAAAAGGCCAGGACCTTCTATGAATACATATTAGTAGATACAGATTCAATAGAGTTAACCCACACTCCTGACAAAAAGAACCCAGGGAAAATATTATTTTCAAAATTTAAAATATTAAGGGTTCTATCGCCTACTGAATGGAAAAATCATCCCTGTTCTAGCACTAAATTTTTGCGACAGTTCAAGCCTCAACATTACAACTATTATGATTACATGAATGCATGGCATTACATGCTATTATTAGAACCAGGGGATCACTCATGGTTCATTTGGTTTAAGAAAGAAATAACATTAAACTTTCCATTATGGTTCATTAAATGGTTTAACGAATGGGGTCCAGATCCAAACATCTACCCTGACTTCGCCAATGAAGCGTTTCAACAATTCAATAAGGAATTAAACTTGCCAGATTACTTCAAGGTTTTAGCCTTTCAAGCTAGCTTTGGAATATCCAGGATTACTTCATGGGACTACAAGATAGAACAAGTCCCAGATAGTGAATTAACCTGGATAGTAAGATTTGTCAAAACCAAATGGTGGAACAAGTATAACCCAGAATTAATTAAAGGCTCAGTACTCCAAGAATGGTTCCAGAAGAACCCTACATTAATGTTGCAACCTAAAAGCAACGCTAAAGATTGCCAGTTTTTGGCAGAAAAATAAAAAATA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00004.32	AAA	807	937	1.30E-36
PF17862.4	AAA_lid_3	960	994	1.20E-09

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0005741	mitochondrial outer membrane	Cellular Component
GO:0016887	ATP hydrolysis activity	Molecular Function
GO:0005524	ATP binding	Molecular Function
GO:0009536	plastid	Cellular Component

InterPro

InterPro term	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR003959	ATPase, AAA-type, core
IPR003960	ATPase, AAA-type, conserved site
IPR003593	AAA+ ATPase domain
IPR041569	AAA ATPase, AAA+ lid domain

trEMBL

trEMBL term	Description
A0A8B8LMN4	_

SwissProt

SwissProt term	Description
MSP1_YEAST	Outer mitochondrial transmembrane helix translocase

KEGG

KO	Description	Enzyme
K22530	outer mitochondrial transmembrane helix translocase

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G19740	P-loop containing nucleoside triphosphate hydrolases superfamily protein
Medicago sativa L.	MsG0480021509.01.T01	_
Oryza sativa L.	LOC_Os06g12160.1	AAA-type ATPase family protein, putative, expressed
Cucumis sativus L.	Csa003687	_
Glycyrrhiza uralensis Fisch.	Glyur001149s00024737.2	_
Codonopsis lanceolata	Cl_chr01_24030T	_
Arachis hypogaea L.	AH03G05420.2	Protein MSP1 like

Expression pattern