Gene detail

Detail information of Am05G012010.1 Annotation

Gene ID	Annotation
Am05G012010.1	Ubiquitin-conjugating enzyme/RWD-like protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G012010.1	mRNA	Chr05	92408172	92410123	+

Sequences

CDS:

>Am05G012010.1
ATGGTACCACCGGCGATAGCATCGCCGAATCCACAAATTACACAACAATTCTTAAGCTCCGTTCTCTCACAACGTGGTCCATCAGCAGTTCCTTACTCAGAAGACACAAAGTGGTTAATTCGTCAACACCTATTATCGTTAACAACAACTTTCCCATCTCTTGAACCCAAAACGGCGACGTTTACTCACAACGATGGTCGTTCTGTTAATCTCCTTCAAGCTGATGGAACTATTCCCATGACTTATCAAGGTATAACCTACAATATCCCAATCGTAATTTGGCTTATGGAATCTTACCCTCGTCATCCACCTGTTGTTTATGTTAATCCAACTAGAGATATGATTATCAAACGCCCTCACCCTCATGTTAATCCTTCTGGTTTAGTTTCTGTTTCTTATCTTCATAATTGGATTTACCCTAGTTCTAATTTGGTTGATCTTGTTCTCTCTTTAAGTCATCTCTTTGGTCGTGATCCTCCTCTTTATTCTCAACGTAGACCCAATCCCAATCCCAATCCCAATCCCAATTCCAACCCTAATCCTAATTCCAATCAGAATCCTAATTCCAATCACAATCCCAATCCTAACCCTAATTTAAATTCAAATCTCAATCCAAGTTCTAATTTTGGGACTTCTTCTTCATCTGGGTATCAACATCATCCTCCAAGGAGTTACCCTCCTTCACCTTATTCACCTTCTCGGCCTCCTACTCCTACTCCTCCTCCTCATACTGAGGACCCTGGCGAGGTTTTTAGGCGAAATGCGATTAATAAGCTTGTGGAGACTGTGCATAATGATGTTACCGCGTTGAGGAAGACAAGGGAGGCTGAAATGGAAGGGTTGTTTGGTTTGCAAGGGGTTTTGAAACAGAGGGAGGAGGGTTTGAATAAGGGTTTGGGGGAAATGGAGGTGGAGATGGCGGGTTTGGAGCAGCAATTGCAAATAGTTTTGATGAATACTGATATTTTGGAAAGTTGGTTGAGGGATAATCAAGAGAAGAAGTTGGAAGGTTTGGAGAATGTTGTTGATGCTTTTGAGTGTGTTGATGTGCTTTCTAAGCAGATGCTTGAGTGCACTGCTGCTGATTTGGCTATTGAAGATACTCTTTATGCATTGGATAAGGCTGTTCAGGTAGGAGCGGTACCGTTTGATCAGTACTTGAGGAGTGTGAGGGTGTTGTCGAGGGAGCAGTTCTTTCACCGTGCTACAGCTACTAAGGTTAGAGCTGCTCAGTTGCAGGCCCAGGTTGCTAATATGGCTGCTCGGAATCAACATTATGGTAGCTGA

Protein:

Promoter(3k):

>AM05G012010.1
CTTATTCGTCCTAATTATTTAAATAGTAAACTCTAAACTATATCATAAAATAATAAATCGAGGTAATTTCCTAAAGGTTTTTGAAACAAATAATCTTTTATAATATAAACCAAAATACTATATTCATGACTAAAAATATTAAAGTTGTTATTTATAAATCTCGTGTTCCAACCACCTTGAAAACAAAAATTATAACTAGTAATAAAATTATGTGATTTAAGTACACTTTAAAATATAAATAAAGTTTATTGAAAATATAATAATAATGAAGTATTACTTTTTATCAAAACAGGAAATGGGTATAATCTTATAGAAGTATTCGATTATATAAACTTAAATACTATATTTGTGACTAAAAATATTAACAATAAAATATAAAAATATGAAAGTTATTATTCATAAATCTCGTGTTCCTTCCAACCACCTCGAAAACAAAAACTATCACTAGTAAAAAAATTATCCGATTTAAGTACACTTTGAAATATAAATAAATTTTGTTTAAAATATAACAATAATGAAGTATTACTTTTATCAAAACAAGAGTGAATGGGTATGATCTTATAGAAATATTACTTAAAATTCTAACAAAATTACACTAGGGGTTCTTTAAGTTATTTATTTGTAATGAGTTGGTCCGTTATGTTTTTTTCATACGAACTAAGTCATTTAAGCTGCTTAACATTTTCACCATTGACCTTTCCTTTCCATCTAACACTTTTAAAAAACATCTATGTGCAGTTAAGTGCTGATGTAACTGTATAAATAATAATCCAGGAAAATTTTTAATGATTTTTTCCCTAGATTATGTGATTTAAGTACCCCCAAATTTTAATGATTTTTTTACTAAAATTAAATACCCCCAAATTAGTCAACCTCGTCACGCTTCAAACCTAGAATTAAATAACCCCAATTTTAAATACCCTAGAAATTTTTCCCGGGACTCCTAACACACTCCCGGCGGGTTTGAGTAATTCCAATCATAAAATGTGTTAGGAGTCTCGGGAGTACTCAACCTCGTCACGCTTCAAACCTAGAAACTTTTTGAAACTTAAAATGTTAGTTGCATTAACTAAATTAGTCTCATTCGGTTAGGGCCTGATGCGACTGAAGTTATTATGGACTGAGATAAAACACAATCTTGCAACGGCGTCCCACTAGCATCCGAATGGAAGGGTCAATCCTCGCAATTTCGTTCTAAATTTAGCTTCTGTGATTTCTTGGGATCCAACAATTTTTATGCAAGCTGCACAATCTGAGTGCCAAATTGAAACGGTAGATGGAAGACCATATATTGTCTTGCTGAAAGATAAAGACAAAATGAAGGGAGTAGTGGTTGGCGGTGGGAAGAAAGAGCGAGAGGCAATCAAAGCTGCGGTTGTGTGGCAGTGGCGGCGGAGGAAGAGGAAGGCGACCTAATTAAGAGAGGTGGAGGTTATGGAGGATTGGGGATTGGTGGTTAGTTGTGGCAATAGTGCAGAGGGATTCTGCTGCTGTTGTTGTTGCTCTTGCATGATCACCGCACCATTAATCATTCTGAACCTTCTTACAGAAGATGATTCGCTGAGTGATGAAGAATCAGTTAGGGTTTTAGGTGTGCTTCTAATTGGAAGATTCTGTTGCGATCAATTGCCATGGTTTGGGGTATATTCATCTTCTTCTGCCTTTTACACGACGGAAGAGTGCTAGGGTTTTTTCAATAGGGAACCGGTAAATACCCAACTCCATTTTTGATTTGTTACACACATATTATCAAACCATCAATTTGTGTTAGCTAAAGATTAAGTTACCCTTTTGTGGTTTTAACTCTCAAATTCACAGCTAAAATTATTAGAAAGAGAAAAGAAGCATTACCTTTCATTACCACTCTAGTTTTACGTTTGGTATTAGAAAAACTCTTCACTATCTTTAGTTATTATAAGATGTGGTGAAGTGCAAATAAGTGGCAGTTTAATGGTGAGATAAGATGAAGTGTCGAAGTCGATGGTGAGGTGAAGTGATGTGATTAAGTGAAAATACAAAAGAGTTGCTCCAATGTTTTGGGAGTCCAAATAAAGAGTCATGAGACAATTAATTTTTATTTTAGGTCTATAAAATATTAAATAAATATAAAGAGTAAATTTGCAAAAGTTTGCTAAATTGTATGATGGTTTATTAAAAATACCATTGGGACAAAAAAGGGTCAAAAATAACAAAAATTAGGAACAGAGGAAGTAGTGTTTTTTGGTGGTCCCCAGTATAAGAAACATGCACCATTTTTAATATATATTAAATGATCAATCCCAACATTATCTCTATTTAAGTGGTGTAATTTTTTGACACAAATTCAACTAGTGTAATTAGAGGTGATGTCATTAATTATGAGTATAAATTATTATTTAATGAAAATTACAAATTTGGAAGGAAAGTTAAACTTTCAACTTTATTAAATGAAAATAGCTGATTCTAATGTTATTAATTAGGAGTATAAACCATTATTTAATGAAAATGACAATTTTAGAAATGAATTAAACTCTCAATCTTGTTACTGAGAATAATTGATTTCAATGTTATTTATTTTTCTGCTTCACATAGGGGTTTGTTTCCTATACTATCAAGAGAATAGATTTTTATAACAAAAACAAAGCCATATTATTTGTTACAATTTCATTAAAAATTCATTTTTGTTCCAATTTATTCGTGTATCCTAACGACTTTCTTCTCATCAATAACCTAAGAATTTGTCAAATTTAATTTTCTAAACAAAATAAAAAAAAGCATAGAAACACTTTAAACAATACCCAAACCGACGTCGTCCGAAACTCTCAAGAAAGTGAAGTTTCTAAGCTCTCAATCAATCAATGACGCGTAACCCAGCTCGCTAAGGCAAAGCCACCACCCTTTCTTTCACTCCATCCCCAATTCTCATTTCAATAACCGATCACCCACCTCTTCTCTTCAAATCTTCTCAAATCCCCAATTTTCAATCACCGAACCCTAACAATTACTTCAACACTGAAAACC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF05743.16	UEV	41	161	1.80E-40
PF09454.13	Vps23_core	344	406	3.80E-25
PF00179.29	UQ_con	81	155	1.80E-06

Gene family

Gene family	Subfamily
Ubiquitin Family	UEV

Gene Ontology

GO term	Description	Category
GO:0036211	protein modification process	Biological Process
GO:0015031	protein transport	Biological Process
GO:0030659	cytoplasmic vesicle membrane	Cellular Component
GO:0098588	bounding membrane of organelle	Cellular Component
GO:0098796	membrane protein complex	Cellular Component

InterPro

InterPro term	Description
IPR016135	Ubiquitin-conjugating enzyme/RWD-like
IPR008883	Ubiquitin E2 variant, N-terminal
IPR017916	Steadiness box (SB) domain
IPR037202	ESCRT assembly domain

trEMBL

trEMBL term	Description
A0A9D4VSP7	_

SwissProt

SwissProt term	Description
ELC_ARATH	Protein ELC

KEGG

KO	Description	Enzyme
K12183	ESCRT-I complex subunit TSG101

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G12400	Ubiquitin-conjugating enzyme/RWD-like protein
Medicago sativa L.	MsG0080048822.01.T01	_
Oryza sativa L.	LOC_Os02g58640.1	tumor susceptibility gene 101, putative, expressed
Cucumis sativus L.	Csa016894	_
Glycyrrhiza uralensis Fisch.	Glyur000205s00012943.1	_
Codonopsis lanceolata	Cl_chr07_27480T	_
Arachis hypogaea L.	AH03G07550.1	Protein ELC like

Expression pattern