Detail information of Am05G012000.1 Annotation
Gene IDAnnotation
Am05G012000.1 Pentatricopeptide repeat (PPR) superfamily protein
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am05G012000.1mRNAChr059238789392391686-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF13041.9PPR_22583061.70E-170
PF13041.9PPR_22933391.70E-170
PF13041.9PPR_23624111.70E-170
PF13041.9PPR_24354811.70E-170
PF13041.9PPR_24715161.70E-170
PF13041.9PPR_25065511.70E-170
PF13041.9PPR_25375861.70E-170
PF13041.9PPR_26086531.70E-170
PF13041.9PPR_26777261.70E-170
PF13041.9PPR_27127591.70E-170
PF13041.9PPR_27828301.70E-170
PF13041.9PPR_28238641.70E-170
PF13041.9PPR_28518861.70E-170
PF12854.10PPR_12582832.20E-166
PF12854.10PPR_13593902.20E-166
PF12854.10PPR_13944252.20E-166
PF12854.10PPR_14634952.20E-166
PF12854.10PPR_14985312.20E-166
PF12854.10PPR_15355652.20E-166
PF12854.10PPR_15685982.20E-166
PF12854.10PPR_16056352.20E-166
PF12854.10PPR_16747062.20E-166
PF12854.10PPR_17097402.20E-166
PF12854.10PPR_17778092.20E-166
PF12854.10PPR_18138442.20E-166
PF12854.10PPR_18478792.20E-166
PF01535.23PPR2602902.80E-133
PF01535.23PPR3663942.80E-133
PF01535.23PPR4004302.80E-133
PF01535.23PPR4374652.80E-133
PF01535.23PPR4715002.80E-133
PF01535.23PPR5055342.80E-133
PF01535.23PPR5405702.80E-133
PF01535.23PPR6807092.80E-133
PF01535.23PPR7157422.80E-133
PF01535.23PPR7848132.80E-133
PF01535.23PPR8198492.80E-133
PF01535.23PPR8548842.80E-133
PF13812.9PPR_34915484.30E-76
PF13812.9PPR_35255824.30E-76
PF13812.9PPR_36657224.30E-76
PF13812.9PPR_37768264.30E-76
PF17177.7PPR_long3084279.40E-57
PF17177.7PPR_long4886249.40E-57
PF17177.7PPR_long6547669.40E-57
PF17177.7PPR_long6957789.40E-57
PF17177.7PPR_long7648779.40E-57
Gene family
Gene familySubfamily
----

Gene Ontology
GO termDescriptionCategory
GO:0043231intracellular membrane-bounded organelleCellular Component
GO:0031930mitochondria-nucleus signaling pathwayBiological Process
GO:0140053mitochondrial gene expressionBiological Process
GO:0004519endonuclease activityMolecular Function
GO:0005737cytoplasmCellular Component

InterPro
InterPro termDescription
IPR011990Tetratricopeptide-like helical domain superfamily
IPR002885Pentatricopeptide repeat

trEMBL
trEMBL termDescription
A0A1S2YJH2 _

SwissProt
SwissProt termDescription
PP437_ARATHPutative pentatricopeptide repeat-containing protein At5g59900

KEGG
KODescriptionEnzyme
K17710pentatricopeptide repeat domain-containing protein 1

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT5G59900 Pentatricopeptide repeat (PPR) superfamily protein
Medicago sativa L.MsG0680034931.01.T01 _
Oryza sativa L.LOC_Os01g06000.1PPR repeat containing protein, expressed
Cucumis sativus L.Csa017212 _
Glycyrrhiza uralensis Fisch.Glyur000205s00012941.1 _
Codonopsis lanceolataCl_chr02_09590T _
Arachis hypogaea L.AH13G09930.1Putative pentatricopeptide repeat-containing protein At5g59900 like

Expression pattern