Gene detail

Detail information of Am05G011220.1 Annotation

Gene ID	Annotation
Am05G011220.1	exportin 1A

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G011220.1	mRNA	Chr05	88862985	88876485	+

Sequences

CDS:

>Am05G011220.1
ATGGCCGCCGAGAAACTCAGAGATTTAAGCCAACCGATTGATGTTCCCTTGCTCGACGCTACCGTCGCAGCCTTCTATGGCACCGGATCTAAGGAAGAGAGAAATGCTGCTGATCAGATTCTGAGAGACTTGCAAAACAATCCCGATATGTGGCTCCAAGTCATGCATATTTTGCAGAACACTAAAAATCTGAATACCAAGTTCTTTGCCTTGCAGGTCCTAGAAGGTGTAATTAAATATAGATGGAATGCACTTCCTGTCGAGCAGCGAGATGGGATGAAAAATTTCATCTCTGATGTTATTATACAGCTTTCTAGCAATGAAGCCTCATTTCGAATGGAAAGGTTGTATGTCAACAAACTCAATATTATTTTAGTTCAGGTTTTGAAGCATGAGTGGCCAGCAAGATGGCGAAGCTTTATTCCTGACCTTGTCTCAGCAGCTAAAACTAGTGAAACAATCTGTGAGAATTGCATGGCTATATTGAAACTTTTGAGTGAGGAGGTTTTTGATTTTTCAAGAGGAGAGATGACTCAGCAGAAGATAAAAGAGCTTAAACTGTCATTGAATAGTGAATTTCAACTCATACATGAGTTATGCTTATACGTGTTATCGGCATCCCAAAGGACTGAGCTCATACGTGCTACACTGTCCACATTGCATGCCTTCTTATCATGGATTCCCTTGGGTTATATATTTGAATCACCATTGCTTGAGACTCTCCTAAAGTTTTTCCCGGTTCCAGCATATCGGAATTTAACTTTGCAATGTTTAACAGAGGTGGCATCCCTTCAATTTGGGAATTATTATGATGTTCAGTATGTCAAGATGTATAATATATTTATGGTCCAATTACAGAACATACTCCCACCTACCACAAATATACCCGAGGCATATGCAAATGGCTCTAGTGAGGAACAAGCATTTATACAGAACCTGGCACTGTTCTTCACCTCATTTTACAAGGTTCACATTCGCATTCTTGAATCCACTCAAGAGAATATATCAGTTTTACTATCGGGCCTTGAGTATCTTATCAACATTTCATATGTAGATGACACTGAGGTTTTCAAGGTCTGTTTGGATTACTGGAATTCCTTGGTTTCTGAGCTGTTTGAGCCACACCGAAGTTTGGATAGTCCTGCCACGGCTGCAACTATGATGGGACTTCAGGTGCCGGCAATGCTCCCTGGTATGGTTGATGGGCACAATTCTCAGCTTCTTCAGCGTCGGCAGCTGTATGCTGGTCCTATGTCAAAGCTGAGGATGCTTATGATCTGTAGAATGGCCAAGCCTGAAGAGGTTCTCATTGTTGAAGATGAAAATGGGAATATTGTCCGCGAAACGTTGAAGGACAATGATGTTCTTGTTCAATATAAGATTATGAGGGAGACTCTGATTTACTTGTCACATCTTGACCATGATGACACTGAAAAGCAGATGCTGAGGAAATTAAATAAACAACTCAGTGGGGAGGATTGGACATGGAACAATTTGAACACACTATGCTGGGCAATCGGATCTATATCTGGATCCATGTCGGAAGAACAGGAAAACAGATTTTTGGTTATGGTGATTCGTGATTTATTAAACCTATGTGAAATCACAAAGGGAAAAGATAACAAAGCAGTTATTGCAAGTAATATCATGTATGTTGTTGGGCAATATCCAAGATTTTTAAGAGCTCATTGGAAGTTTCTTAAGACTGTTGTGAACAAGTTGTTTGAGTTTATGCATGAGACACATCCTGGAGTTCAGGATATGGCCTGCGACACATTTCTGAAGATAGTCCAAAAGTGCAAGCGTAAATTTGTGATCACACAGGTTGGGGAAAATGAGCCATTTGTATCTGAGCTTCTGTCAGGTCTTCCAATCACTATTGCTGATCTTGAACCCCATCAGATACACTCCTTTTATGAATCTGTTGCTCACATGATTCAAGCAGAGTCTGATGCACAGAAGAGAGATGAATATCTTCAGCGTTTGATGGTGCTTCCATATCAGAAATGGAATGAGATTATACAGCAGGCTCACCAAAATGTTGAATTTTTGAAGGATCAAGAAGTAATACGGACTGTCCTTAATATATTACAGACAAACACAAGTGCTGCATCTTCTTTAGGGACATATTTCCTGCCCCAAATCTCGTTAATCTTTTTGGACATGTTGAATGTGTACAGAATGTACAGTGAGCTTATTTCAAAAAGTATTTCCGAGGGAGGGCCTTATGCATCTAAAACATCCTATGTGAAACTTCTACGTTCGGTCAAGCGGGAGACACTTAAACTGATTGAGACGTTCTTGGATAAAGCTGAAGATCAACCACAAATTGGAAAACAATTTGTGCCACCAATGATGGATCCTGTCCTGGGCGACTACGCTAGGAACGTACCTGATGCACGGGAATCAGAGGTTTTGTCACTTTTTGCTACAATTATAAACAAATATAAAGGTACAATGATTGAAGATGTACCTCGCATATTTGAAGCTGTTTTCCAGTGCACACTAGAGATGATTACAAAAAATTTTGAGGATTACCCAGAGCACCGGCTAAAGTTCTTCTCTCTACTACGCGCCATTGCTACTCATTGTTTTCCTGCACTGATCTGCTTGTCAAGTCAGCAATTGAAGCTTGTTATGGATTCCATCATATGGGCATTTCGGCATACAGAAAGGAATATTGCTGAAACTGGGCTGAACCTGTTGTTGGAGATGCTGAAGAAGTTCCAGGGCTCGGAGTTCTGTAATCAGTTTTATCGGACATATTTTCTGACAATTGAACAAGAAATATTTGCTGTCTTGACGGACACTTTCCATAAGCCCGGGTTCAAATTACATGTCTTGGTGCTTCAGCATTTATTTTGTCTGCTAGAAGCTGGTGTCCTAACTGAGCCTCTTTGGGATGTTGCTACAAGTCCATATCCATACTCAAACAATTCAGTGTTTGTACGCGAGTTTACCATAAAGCTTCTGAGTACTTCTTTTCCCAACATGACAGCAGCTGAGGTTACCCAATTCGTTACTGGACTCTTTGAGTCTACAAATGATCTCTCTATCTTTAAAACCCACATACGAGATTTTCTTATACAGTCGAAAGAATTTTCTGCTCAGGATAACAAAGATCTCTATGCTGAAGAGGCTGCAGTGCAGAGAGAGAGAGAGCGACAAAGAATGCTTTCTATTCCCGGGCTTATTGCTCCTAGCGAATTGCAAGACGAAATGGATGGAAGACTCGTTCCGAGTTTTGATGACTACTTAGGTTACTTCCCCGTTGACACTTTGAGATTTTGTAAAACTAGGATCCCGTCGATAGAGCTATCAGCAGTTCTCATTGCTATCTGCGTAGCGGATAATGTGCCGGATAGGATGGGAAGGCGCATAATTTTCCCACCATGGAAAGATTCCATTTTGACCCACTAA

Protein:

>Am05G011220.1
MAAEKLRDLSQPIDVPLLDATVAAFYGTGSKEERNAADQILRDLQNNPDMWLQVMHILQNTKNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNFISDVIIQLSSNEASFRMERLYVNKLNIILVQVLKHEWPARWRSFIPDLVSAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQKIKELKLSLNSEFQLIHELCLYVLSASQRTELIRATLSTLHAFLSWIPLGYIFESPLLETLLKFFPVPAYRNLTLQCLTEVASLQFGNYYDVQYVKMYNIFMVQLQNILPPTTNIPEAYANGSSEEQAFIQNLALFFTSFYKVHIRILESTQENISVLLSGLEYLINISYVDDTEVFKVCLDYWNSLVSELFEPHRSLDSPATAATMMGLQVPAMLPGMVDGHNSQLLQRRQLYAGPMSKLRMLMICRMAKPEEVLIVEDENGNIVRETLKDNDVLVQYKIMRETLIYLSHLDHDDTEKQMLRKLNKQLSGEDWTWNNLNTLCWAIGSISGSMSEEQENRFLVMVIRDLLNLCEITKGKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRKFVITQVGENEPFVSELLSGLPITIADLEPHQIHSFYESVAHMIQAESDAQKRDEYLQRLMVLPYQKWNEIIQQAHQNVEFLKDQEVIRTVLNILQTNTSAASSLGTYFLPQISLIFLDMLNVYRMYSELISKSISEGGPYASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKGTMIEDVPRIFEAVFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALICLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLLEMLKKFQGSEFCNQFYRTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLLEAGVLTEPLWDVATSPYPYSNNSVFVREFTIKLLSTSFPNMTAAEVTQFVTGLFESTNDLSIFKTHIRDFLIQSKEFSAQDNKDLYAEEAAVQRERERQRMLSIPGLIAPSELQDEMDGRLVPSFDDYLGYFPVDTLRFCKTRIPSIELSAVLIAICVADNVPDRMGRRIIFPPWKDSILTH*

Promoter(3k):

>AM05G011220.1
CAAACTTTGCGTACGTCTGCGACTACAGAGTAGCTGTAGTTCCGTTTTATTGATTGTGTGTCTTGATCCTTTGAGTACAAACACTTATGAGTTTAAATAGGCTATTCTATGAAAACCTAACGGGTCTGGGCCGAATACATATGTAAATAAATCTACAAATCTACTATTTACAATTATGATTTGTAAATCCGCGAGAACGCCTAAAATCAGGAAGATGGTAACGTTCACATTTGTACGGACCAAGGTACCCCATAGGTGTTGGATAGCCAGCATCCACTACCCCATGACCAAGTACCTGATGAAAATGTCTACTTACGGTCTCTCCTGAGTGTTGAAACCTTTCTTGAATCATTCTGTTCCCTACCCCATGACCAACAACAACTAAAAACATTGCAACCATATCTTCAACCCCCATGTGATTAGTGGACTTCAAACCAAGCTCAACTAGTTCACTACAAAGTGTGTGGAAAACATGTTTTCCCATCCGAAACATCTCATAGCAACGAGTGGGATTCCCACGCAATATTTCTTGCACCCATGAATGACCCGTTGGTTCACCAGTTCTACAAGGCTCTTTGCATAAATGTTTTGCTGCATAAATACCAATTTGTGCAGCCACATAAGAAACTTGTTCAAAAAAAGCATCATCTTCATTTGTATTAAGCCCCAATTGTTCATTCCTATCATTCATCCTTCCTTCAATATACCTATCAATAAGTAATAAAAATGTGATTAAGATTAAGAAAATAAATTAAGTTAGATAAATGCAACCATAATATGAACTCTGGTGCATATAACAGAATCTGGTGTATCAATTAAAATGAATGGGTTTTATTCCTATCATTCATCCTTCCTTCATGTTTTTTCACTGTTACCGAATGTGTATTTGGCCATGAATTGTGGTATCAAACCCAAATTGTGATTTGGAAGGTTGTATTTTGCGTATTGCGGGGATGTAATATTTGTGTATGTAGTTTATGATTTTCGAACTATATATATGTATTTTGAGTTTAGTTTGTGGAAAAGTGGCGGCAAAAAAAATGATGGGGACTAAAGAATTTTGTAGGGACTAAAATCAAAATTCCTATAATTTATAGAGACTAGAAACATAGTTAACACAATCTCAAATGGAGAATAATTATAGTCATGTTGTGAAACCTATGCAAACTCAATAAAAGGCTAAGCAGTCTTCCCAAGCTTTTGAATTTATTTAAGATTTGACTTGATCATATCATAACTAACCACATACATTTTTGGGATTAAAAGTAGTGTAAAAGATAAACTTACTAACTAGACTTCCCTGTAAAGCTTTACCCAAAGAGAAATGTTAGGTACAATCATTCAAACACTCTCTTATAGAAACTCGCTCGGATATAAAGCCATGTCACTCATGCAAAACACACAATCTTTTCCTTCTCGAACAAAACTTCATCATGCCGAAAACAATCATTTTGAACAACATGCTCACAAGCAACACATAATTGAGCCGTGAGTTACAAAAAGTGCATCCGCACTCATGCTAGACTAAGCCTTTTTGTGCTTGATGCAATTGCTCCAAGAATTAATAACCCATTTGACACATTTTTTGTTCGACTTACCTTGACCTCCCAAGTACTTCAAGGACTCATGGTCACTATGAATTACTAGTACAAATTTTTAGCAAAAAATGTTGCCAAATATGCAATGCTTTAACTAGTACATAGAGTTCTTTGTCATGTGTGAAATGATTCAAACACACACCGCTTAGTTTCTCATTAAACTAGGCAATAAGATGACCCTCTGGCAACAAGACTACTCGAACACCCGTATTAGAAGAATCACATTCCAATTCAAATGTTTTAGTCACATTATTCAAGACTAAAATGGGGGTATTAATTAACTTTTCTTCAAGTTCAAGGAAAACCGTCTCCCCTCCCAAACATTACATTATTTTTCAGAACATCATTAAGATATGAAGCCAATGTACTAAAGTTTCTTACAAACCTACTATAGAAGCTTCCAAGTCCATGAGAACTTCTCACATTATTCACATTCTTAGAGACCGACCATTTTTATAGCTTTAATTTACTCTTCATCAACCTTTACTCCTTTTGTATCCCGAAAAAAGTACCACTTAATGTTGATAAAAAGTAACATTTTCAACACACTTCGAATGTTCAATGATCATCATTATTCAATCTATACACAAGTACGTCATCAAAATAAAAAACAACAAATTTCCCGACGAAATAGCTTAAGACATAATTCATTAATCTCATAAAGGTTTAACTAACAATCCATTAGGACCTAATATAGTCTTTAAAGTGGGAATGCTTCGCTGACGAAGAGACAGAAATCAATATATAGCGAATTAAACAATGCATTAAAATTAATGGAACTACCCGATCCAGCTATTATTAGTCATGGTCTATCATAAACAACTTAATTTACTAATCCACTTTTTACTTTTTTTTAAAATTTATTTTAGTTGTCAATATTTTTTGAAAAGTTTTTTTCAAGTAAAAAAATTCCCATTCCCTAAAATTGACCAACAAAATTCTACCCATTTTCTCCAAACCTAATAGCCCCCCAAAAAGGATCCAACCCATTCCCAAGTTATAGTCACAGACCATAGTAGTAGTCCATAGTAACAGTAGCGATAGCGAATCAAATCAAACGGGCACACCTTTACGTGTTCCCCCTCATCTTTCGTACGCTCTCCCCCTCTGCTTCAAATTCAAGCTGTCTTTTTCCTTTCTCTCCCTCTTTCCTTTTTTTTTAATTTCATTTGTATTATAAATTACGAGTAAGAATAAAAAGAAAAACTAAAAAGTCCAAACTCTTCTCTCGCTCTGTCCCGGAAATCCCTCTCTCTCTTTCTTTCTCTCTCGCTCTCCCTAGAATCTCCGTCTCTAGGGTTTTTGTTCACTGCACTTCACAAGAGTCTTCTCTTCTACTCTACTCTACTCTACTCTACTCTAGGGTTTTAACACTCTTCAATCTTCTTTTTCTTGTTTCTCC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF08767.14	CRM1_C	714	1035	1.60E-127
PF08389.15	Xpo1	115	258	5.20E-40
PF18784.4	CRM1_repeat_2	410	477	6.90E-31
PF18787.4	CRM1_repeat_3	491	540	9.90E-28
PF18777.4	CRM1_repeat	337	372	3.20E-19
PF03810.22	IBN_N	37	103	1.30E-14

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0005634	nucleus	Cellular Component
GO:0031267	small GTPase binding	Molecular Function
GO:0005737	cytoplasm	Cellular Component
GO:0000056	ribosomal small subunit export from nucleus	Biological Process
GO:0000055	ribosomal large subunit export from nucleus	Biological Process

InterPro

InterPro term	Description
IPR001494	Importin-beta, N-terminal domain
IPR013598	Exportin-1/Importin-beta-like
IPR045065	Exportin-1/5
IPR040485	Exportin-1, repeat 3
IPR041235	Exportin-1, repeat 2
IPR014877	Exportin-1, C-terminal
IPR041123	Chromosome region maintenance repeat
IPR016024	Armadillo-type fold
IPR011989	Armadillo-like helical

trEMBL

trEMBL term	Description
A0AAN9K9R3	_

SwissProt

SwissProt term	Description
XPO1A_ARATH	Protein EXPORTIN 1A

KEGG

KO	Description	Enzyme
K14290	exportin-1

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G17020	exportin 1A
Medicago sativa L.	MsG0480021844.01.T01	_
Oryza sativa L.	_	_
Cucumis sativus L.	Csa004179	_
Glycyrrhiza uralensis Fisch.	Glyur000216s00014139.1	_
Codonopsis lanceolata	Cl_chr02_07570T	_
Arachis hypogaea L.	AH13G11210.1	Protein EXPORTIN 1A like

Expression pattern