Gene detail

Detail information of Am05G011050.1 Annotation

Gene ID	Annotation
Am05G011050.1	Transcription factor DP

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G011050.1	mRNA	Chr05	86865452	86873103	-

Sequences

CDS:

>Am05G011050.1
ATGGGAACGCGACCACGCCAATCGAGTGTTGATGAAGAGGATGGCTGTGGAACCACGATTTCGGGACAATCTGGTTCGACGAGCAGAAGTTCTGGGTTGCCATCTAGCCGGAGTGATCAGACGACGACTGATAACGCGCTAATCAAATTGAACCATCTTGATTTACAAACTGATGATGCTGGTTCACAGGGAGCCGTTGCTAGCAAGAAGAAAAAGAGAGGCCAAACAAGGGCTGTTGGAGGTGATAAGAGTGGAAGAGGGCTCCGACAATTTAGCATGAAAGTGTGTGAGAAGGTAGAAAGTAGAGGAAGAACAACTTACAATGAGGTTGCCGATGAACTTGTGGCTGAATTTTCTGATCCAAGCAACAGTGCTTTGTCCCCTGATCAGCAACAATATGATGAGAAAAACATTCGTCGAAGGGTCTATGATGCTCTAAATGTTCTCATGGCAATGGATATTATTTCTAAGGATAAAAAAGAAATACAATGGAAAGGTCTTCCTCGTACTAGTCTGAACGATATTGAAGAATTAAAGACAGAGCGTCTTGGGCTCAGGAATAGAATTGAAAGGAAAGCAGTCTACCTGCAGGAGCTTGAGGAGCAATTTGTAGGTCTTCAGAACCTTATTCAACGAAATGAGCAATTATATAGCTCAGGAAATCCTCCCAGTGGAGGTGTATCTTTACCTTTTATTCTAGTACAGACACGTCCTCATGCAACTGTTGAAGTGGAAATATCAGAAGACATGCAGCTTGTTCATTTTGATTTCAATAGTACTCCTTTTGAGCTGCATGATGACAATTATGTTCTCAAGGCAATGAAATTTTGTCAGAGACCACAGATTGAAATTATTACGGATAATGTTACGGATGGAGGGGAAGGTTCTAGCATGTCAGGCATGTATCAGTCACAGGGCCCTTATGAGGCTTTAGGTCTTCTATTTCATAATAACTTTGATGGAAATTTTGTTATACCCGATATTCTTTTGGAAGAATTGCGGTTCAAGATCAGGCCCCTAGATGGAGCTCTGATGCCAACTGTAGAAGCTATAGAAGGGTAA

Protein:

Promoter(3k):

>AM05G011050.1
CGTGTAACATCTGCTCTAATCAAACAGATGCTCATCGTCTGTTTATGCGATTAGTTTTAATTTACGGTCAACACAATTCATACTCCCTCTTTCTTGTGCGATTTTAACTAGTAACTAATATTTTACCCGTGCATCCGCACGGGTGACACTGTATTGTTTACATATTGCTATGAAGTCATTATAGTATTGAAATTATAATAAGTTTAGTAATCTATACATTTAAATGACATTTTGGCATGTTTATATATTGTTATGAAGTCTTAATAGTATTGAAATTATAATAAGTTTAGTAACCTATACATTTAAATGGCATTTTGGCATGTTTATATATTGCTATGGAGTCATAATGGTATTGAAATTATAATAAGTTTAGTAATCTATATATAAAGATAGTTAGTAATTTCTAAGTTTTCATAAGGCGTTAAACAATATCTAAAATGTATGAGTTTGATAATAATTTAACCATTTTAATTTAATTATTCATTTAACATAAGATATGCACCCCCTTTGGCGCTCCCGTTAGCGCTCTCGTTACTAAATGATTGAAAAAAATTATTTGAATTTTTTGGTGGTTAAATTATTTTTTACAATTGTTAGTAGTTAAAATGATTGATTTTAGTATTAATTTATTCATTTTACTAAATCATTTATCTCGTTCATTTAATAATAATTTAATCATTTTAATTTAATTATAGATTTTTTTAGAAAAAAATAATTTTGAAATTTTTGTTAATGGTATGACTTTTTTTGACAATTGGTAATAGTTACATTGGTTTTAGTAGTTTGAATAGATAATATAAATAGTATAAAAAACTTAAATTTTATTCAAAAAAAAAAAGAAAATAAAAATGTCAGCTTTTGGTTATTTTTTTTGTCAGCTTTTTTGTTTTTTTCTGTCATTCTGCGCGCGCGTTAGTGTTTGTTTTTTTGGCAGCTTTTTATTTTTTTTCTGTCATGCAGTTTTTTTCTGCAAGCATTTGCTGCGTGTCAGTAACTTTTTGGCAGTGTGTCAGCTGCTTTGGCAGCGCGCCAGCTGCTGGTTTTGTCTCAAAAAACTGTTGCTTTTTTGGCATTTAGTGGGCATTTTACAAAAATGCCCCAAAAAATGGACAAATGGCAATTTTGCAATATGTCTAATATGGACAATTTTTTTTTTGACGGTGGACAATTTGCTAACACTTAATTTTACTATATTAGACTAGTAATTTTGGCCCCTCTAAGTATATACACATGTGAGACATCAATGTTTTTGGTTAGAACTTGAACAACAATTGGATGAATGGACAAAAATCGTGCAATCACGATACCTAAAGAACCCAACTCATCTAATTGAAATCTAACGAACCAAAATTCCATAATCACAATACTTAGGGGACTCGTTTCGCTCAATTAAAACTTGATGAAGTAAAATTGCCAAGTCTCAATACACGGGCACCAAAACTACAATTAATAGGGCATGCATAGTCGATCTAAATTAATTTTACACTAACATCGAACGAGATCCTATTTTTTTGCCATGTTAACCCACTTTGTCACTGTTTTTTAAATTAATTGTCCGATAGTGAGTTCTCATTGGATGCTAGTGTAAAACTACTTTACACCGACAATGCATACCCGTCAAATTCCTTAAAAAGCAAGAAATATTAACAAGACACTCTCACCCAAATTTATACGAGACGCACGGTGACTCTTTTAAATTTCAATCAATAAAATTAGGGTGGAAATTGCAGTTAGATTTATAATTAGGGGGTAAATACGTAAACTGCATTTGACCCAAAAACTTACATACAGTTTAAGTTTAGCAAATGTGTAATGCATGGAGAGCTATGAAGTCTGGATACCGGATACGATACGGGATACGACACGATACAGATACGGGGATACGGAAAATTTTTGAAAATCAAGATACGACACGGCTGGGATACTTTAATAAAAAATTAAATTAAAATTTAAATATATAAAAACATAACAGAAAAAATAAAATAGAATAGAAACACAAATAGAAAAAAACAAAGATGAAAAACTGAAATATTGCATTTTATAGATATGAAAAAAAAACTGGCCAAATAGATAAAAAAAATCACACAGAAAATATATGGATGAAAGGAAGAGGACAACCGACACACCTATGTATGAGTGACTAGTCATAAAAAGTAATGGTGGACAAGTAATTGAGACCACCCGAAATCGTATAATACGAATAGTCAGTGGCAGAAATAGATGACTTTTATAGACTAAGATATTCATATTAGTACGTAATTGGTCAATAAAACATAAGCATATCATTAGTCGATATATATTCATCACATTGTAGAAATAAATACTTGTGATCTTATCAAGTAGAGATAGTTACGTGTATTTATCCCACTCATATCACAATGTATTATTTCTTCTATTATTGTATTACGAAAAAACATATAATTTTGTCTTTTAATTATTGAGGTATTAAAGTGTATCATATATGAGTGACAATCATGTGCTTAGTTGGTAAGAGGTATCGAAAAAGTATCTGAGAAGTATCCTTAGTTGGTAAGAAGTATCAAAGATGTATCTGAAAAGTATCGAGTCAAATATTTTTTAAAAAGAATTAAAAAATTATTAGATACTCTTTGAGTACGTATCGGGAAGTATCGGTATCGGATACGATTTTTGAAGTATCGGGGCTTCATAGATGGAGAGATAGGCTGAAGAAACGACAGGAAGAAATTTTGGGGCGAAAGGAAACTGTATTCTGGTAACTGAACAATTCCGCCCTCGCTCAGATCTACTCCTTCACTCCGTCACCGGTAACCGCCGTCTTCCAAACGTAAGCAGCTCACCATCTTCTTCCTCTCTTTTCCTTTTTCAATTTCATTGTCGCATTTCTTCTTCCTTTTGCGTGCCCTAGGCATCATTTCACTCTTCGTGTTTGGTCATTTTAGCTTGAAATCAAAACTGCTCTTAAATTGAATTCTCTCTTTTTATCATTCAGGATTTGTTGCTGAAGTCGATAGATGAAAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF08781.13	DP	174	279	6.10E-41
PF02319.23	E2F_TDP	86	166	7.60E-20

Gene family

Gene family	Subfamily
Transcription Factors Family	E2F-DP

Gene Ontology

GO term	Description	Category
GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	Molecular Function
GO:0005737	cytoplasm	Cellular Component
GO:0042023	DNA endoreduplication	Biological Process
GO:0046982	protein heterodimerization activity	Molecular Function
GO:0008270	zinc ion binding	Molecular Function

InterPro

InterPro term	Description
IPR036388	Winged helix-like DNA-binding domain superfamily
IPR036390	Winged helix DNA-binding domain superfamily
IPR038168	Transcription factor DP, C-terminal domain superfamily
IPR014889	Transcription factor DP, C-terminal
IPR015648	Transcription factor DP
IPR037241	E2F-DP heterodimerization region
IPR003316	E2F/DP family, winged-helix DNA-binding domain

trEMBL

trEMBL term	Description
A0A1S2YJ92	_

SwissProt

SwissProt term	Description
DPB_ARATH	Transcription factor-like protein DPB

KEGG

KO	Description	Enzyme
K04683	transcription factor Dp-1

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G03415	Transcription factor DP
Medicago sativa L.	MsG0480021854.01.T01	_
Oryza sativa L.	LOC_Os03g05760.1	transcription factor Dp, putative, expressed
Cucumis sativus L.	Csa004178	_
Glycyrrhiza uralensis Fisch.	Glyur000051s00003423.1	_
Codonopsis lanceolata	Cl_chr04_01250T	_
Arachis hypogaea L.	AH13G12170.3	Transcription factor-like protein DPB like

Expression pattern