Gene detail

Detail information of Am05G010910.1 Annotation

Gene ID	Annotation
Am05G010910.1	heat shock factor 3

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G010910.1	mRNA	Chr05	86317404	86320013	+

Sequences

CDS:

>Am05G010910.1
ATGGCGGCAGGGAACGCGAATAGTGTGGTGCCGCCATTTCTGAGCAAAACTTACGAGATGGTTGACGATTCATCAACAGATTCTATGGTATCCTGGGGAAATAACAATAACACTTTTGTCGTTTGGAATATCACCGAATTCGCTAAACGAATTTTGCCCAAATATTTCAAGCACAACAACTTCTCCAGCTTCGTCAGACAATTAAATACCTATGGTTTTAGAAAGGTTGACCCTGACCGCTGGGAGTTTGCACATGAAGGATTTTTAAGGGGTCAAAAACAATTATTGAAGACAATCAATAGGCGGAAAACTACTAATGCAAATGGTAGTAGTCAACAACCATCTAAGGTGCAGAACGCACCTGTTGGGGCATGTGTTGAAGTGGGGAAATTTGGGATTGAGGAAGAGGTTGATAGACTGAAAAGGGATAAAAATGTTCTTATGCAGGAACTTGTGAGGTTAAGACAACAACAACAAACTACTGATAACCAATTGCAAGGTGTTGGGCAACGTGTGCAGGTAATGGAACAACGTCAGCAACAGATGATGTCATTCCTGGCAAAGGCTATGCATAGTCCGGGCTTCCTGGCTCAGTTTGTACAGCAGCAGAATGAAAGTAGTAGACACATTTCTGGAGGTAAAAAGAGGAGGCTCCACAGGCAGGAAGATGATAGTCTAGCCACCAAGCCTATCCAAAATGCTCTTGATGGACGTGTTGTCAAGTATCAGCCTTCGATAAATGAGGCTGCAAAAGCATTACTGAGCCAAATATTGCAAATGAACAATTCTACAAGGATGGAGTCATCCATTAAGAATTCTGATGCATTCCTTATTGATGATGTTCCTTCAGCCATTCCAATAGATAGCGGTAGTTCGTCCACTCAGGTTTCTGGTGTAACACTTTCTGAGGTTCCACCTATTTCTGGGCAGTCATGTATGGCAGTAGAATCTCAATTTCCTATCAGTTGTATGGCCAATAGCATATCCGAGGAACAATCTTCACCTTCTCTGCTGACTGACTGTGCCGAAGCATCTGAATTTCCTGACTTAACACCACATACTCATCAAGATAATATTTTGGATTTTGGTAAAGTTCAAGGGATGATCACAGAAAACAGCTACTTGAGTCCTGACCAAAATTTTGTGGGGTCTGACAATGAGAATGAGGAGGAGCTAGATGTGATGTCAGCTGTTTTAGAAGGGACATCGTCTTTGAAAGCCGATGCTTTTTCTCCTGATGCAGATGGAGTTCCTAAGCTTCCAGGAATAAATGATGAATTCTGGGAGCAGTTTTTTAGGCCAAGCCCGCTTACCGGAGACACAGACGACATTAGATGCAGCTCTCTAGAATATGGTTTGACCATGGACCTGGAATTATCATCAGAAAAGGAGATTCAACAGGAAAAGATGGATAAAAAACAATATATGGACCATCTTACTCAACAGATGGAACTTCTTGCATCAGAGTCTTAA

Protein:

Promoter(3k):

>AM05G010910.1
GAGATGACAAGTACCTGGAGTTGGAGACAAATTGGTCGCGCTAGCAATTACGAGAAGAAGGCGGTCTGGAGTTGAATCGCGCCGGAGCAAGAAGTCACCCACCGGAGAACACCTCGCCAGAATATCACCGGAAACCTGGTCGCTCACCGGAGAAAGCAAGTCGTTCTCAGAGCAGAAACACAAGAAAGCAAAATGAGAAATGAAGGAAGGGTGTCCCATATATAGGGGAAGCAGGCCAGGAATTGAAGCGACGTGACCCTTCGCTTCCAGCATTAATGACGCCCCTCGAAAATTGAACCACCATCATTTCACGCCCCCATTGGGAAATGCAAAGGTCACGGCTGTCACCTCGAAAGGCGAAATGTCACATCCATCAGACTCAGAACGCCACGTCACTAAAGGGCAAAGAAGAACCCGTTGCTTGGGCGTGATTGCAAGTCGCCTCAACGCAGGCGACCATGCGAAGGCAAAGTCGCTCATTTGGGAGCAATCGTTCTCAGGCCTGAAACCGTCCCTATGGACGGCTTCGGCCTGGGGGGCAACTGTTCCGGACTGGGTCGGAGCCCAACACTGTCACAGGGCCGGCCGCAAGCGACCTAATTAGCGAAGCAGAGAGGTTTGACCTAGATTCGCAGGATCAACGGCTCAGATCAAGCCGTACGCGATCCGACGGTCGTCCGCAGAGCCTCTGACACTATATATAGAGGTCTGGCCTCAGCTGACAGGTACGCTTTTTACACATAACGTTACTCTGCTCGAATATTACCCCACTGACTTGGGCGTCGGAGTGTCATCGCAGGTACTTCCGCCAGAGCTCTGAACGCGACCAACACCTTCGTTCAAGTAGCAAGTGACCTCAACGAGCCAGTAACGTGACCAGGCAAACCAAATCAGATTGATCACCCACATTGGGGCCCGGATCAAGAAGTAAAATTAAGACCAAGTATACTTAAGACGAACCAGGTTGGTTTGACGGACATTTGAAATAACAATATAAAATGATGATCATTCAATTTTGACTAATTGAATGAGACAAATAGTGTGTAAGAAATATTAAAAAAAATTATGAGAAAGTTGAATAGTGAAGGTTTAACACATGAGAGTCTCTATTGAAGTATACCAAAGAGAGTCGCTTCCCGATTTATAGATACACTGGTTTTTATATGGAATCAAAGAAAATGAACTTTTTTTAACTAAAATTCTTTATAAGTATGAGTTAAAATAATTTTTGATATTGGAAGAGTCTATAGAGAGTACTCCCTTCATCACATAGGTATGAAGGATTCGCCTATTTGCCAAAGATGTGGAGATAACGCCGAGACAATGTTGCACTGTCTTAGGGACGGTACTTATGCTAGTAATATGTGGAAGTCTCTTGGTTTTCAATCAACCTCCTTCCTTACGGCAACTACTCAGATAGATTGGCTTACTACTGGGCTAGATGGCCCCAATGTTCACACCTTCATTGCTGGTTTATGGTCGTTATGGAGAGCTAAAAGTTCAAGTTGTATTGCCAATGAGAATATTCCTCCCTTTTAGTTGTTAGAATTAGGTGGATGGTAGTAATTTTGGGAACTAGGGAGTAGCCGGCTTTGGAGGGATCTTTCGTACCAGGTTTGGTGATTGGATTCAAGGATTTGCGGGGAGTATTGGCGTTGGGGATAATCTGCTTGCGGAGCTTATGGCGTTGTATCACGGTCTTCGTCTCGCTTAGAGCAAGGTCTATCGTGATCTTACTTGTTATTTCGACTCAAAGAATGTGCTTCAGTTGGTGACTTCTCCTCCTAATGTTTGGCACAACTATGCTCCCATCATTAAGAACATCAAGGACTTGTCGGATAGAGATTGGAATGTTGAGCTTCTCCACCTTAAAGAAGGCAATGCGTGCGCGGATCACTTAGCAAAGATCGATGTTATATGGATTCTTCGTTGGATTGATTTTGTGTCTCCTCCTGCTGGCCTCAACCTTTACCTTCTAGCTGATGCTAGTGGTGTTGAATTCTTGAGGACTTAGTTTGTGTTTTGTATTTTTTTTTTCCTTTTTTTCCTTTCTTTTGGCCTTCTTGTATCCAAAAAAAGAGTACTCCCTTCATCCCATTTTGCTTGACGTTTTAGAAAAAATTGTCTAATTTTAATAGTCATTTTATTAATACCAATAAAAAATTGTCTCATTTTAATTGACGTTTTAGAAAAAATTGTCTCATTTTAATTGTCCGTTCCTAATTTTTGGTATTTTTGGCGTGTTACACACAAATTAATTTACGTTAGTTAAGTACTAAAATACATCTTTTATAATTGTCTTGAGATAATTGAAATCAAAATAAAAGAGTGTTGGGACAATTAATCCATATTTTGGGACTCTAAATGACTCAATAAAAATAAATGGTATATTTGAAAAATTTTGATGAACTGTATATTTGAGTTTTTAAAAATACATTTGTTTTGGAACAAAAGTAAAATGCCAAAAATACAAAAAAAATTAGAAACGAGGTAGTAAGATATAGATGGAGTAACAAAAAGCATATTAAAAAACTAGGAAATAGTTATCATGAATTTTAGACTATTAATTATTTTTCTTAAACTATGTGCTAGCATTAATGGAGCGAAAGTAATATTTATTGAATAATAATCACGTGAAGTGGTTCAACCCCAATTTTAATGGTTATCATGAAAGCAATATTTATTGATTTGCTCTTTCACCTTCAAAGCACCATTTTTTTTGACAATTATTAATTACTTTTATTATTTGTTAATAAAAAATTAAAAACTTTCCGGCTCCCAAGTTCATTGGATTTCATCGAATCCAAATCCCTAAAAAGCTAAAACCCACCCCTCGCCTTCTTTTCTCTCTGTATTGAAGCTATTGTAATTTGTAATATACAAATATCTCTATCTATCATCACTGCTTTTACTCTCTTCTGTCTTTCTTTCTTCTTCTTCTTCTTCGTGCTCGTCTATATATAAATATATCATCAAAGAGAGAGCGTGTGTGTTTTTGAT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00447.20	HSF_DNA-bind	13	102	5.80E-33

Gene family

Gene family	Subfamily
Transcription Factors Family	HSF

Gene Ontology

GO term	Description	Category
GO:0005737	cytoplasm	Cellular Component
GO:0016020	membrane	Cellular Component
GO:0003690	double-stranded DNA binding	Molecular Function
GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	Molecular Function
GO:0005515	protein binding	Molecular Function

InterPro

InterPro term	Description
IPR036388	Winged helix-like DNA-binding domain superfamily
IPR036390	Winged helix DNA-binding domain superfamily
IPR027725	Heat shock transcription factor family
IPR000232	Heat shock factor (HSF)-type, DNA-binding

trEMBL

trEMBL term	Description
A0A1S3EA34	_

SwissProt

SwissProt term	Description
HSFA1_ORYSJ	Heat stress transcription factor A-1

KEGG

KO	Description	Enzyme
K09419	heat shock transcription factor, other eukaryote

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G16820	heat shock factor 3
Medicago sativa L.	MsG0480021648.01.T01	_
Oryza sativa L.	LOC_Os03g63750.1	HSF-type DNA-binding domain containing protein, expressed
Cucumis sativus L.	Csa019047	_
Glycyrrhiza uralensis Fisch.	Glyur000382s00020385.1	_
Codonopsis lanceolata	Cl_chr02_08080T	_
Arachis hypogaea L.	AH13G11480.2	Heat stress transcription factor A-1 like

Expression pattern