Gene detail

Detail information of Am05G010840.1 Annotation

Gene ID	Annotation
Am05G010840.1	myb domain protein 9

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G010840.1	mRNA	Chr05	86008308	86010239	-

Sequences

CDS:

>Am05G010840.1
ATGATGGGGAGAACACCATGCTGTGATGAAAGTGGTTTGAAGAAAGGGCCTTGGACACCAGAAGAAGACAGAATATTGGTTGATTATATTCAGAAACATGGCCATGGAAGTTGGAGAGCACTTCCAAAACTTGCTGGATTAAACAGGTGTGGGAAAAGTTGTAGGCTAAGGTGGACTAATTATTTAAGACCTGATATCAAAAGAGGAAAATTCACTGAAGAAGAAGAACAATCCATCATCAATTTGCATGCAGTTCTTGGAAACAAGTGGTCAGCTATAGCAGGTCATCTACCAGGGAGGACTGATAATGAAATAAAGAATTTTTGGAACACACATTTAAAGAAAAAGCTTCTACAAATGGGATTAGATCCAGTGACTCATCAACCAAGATTAGACCACCTTAATCTTCTCTCAAATCTCCAACAATTACTCACAGCTACAAACATTGTCACTAGTTTCACAAATACATGGGACACTACAAATGCTTTAAGGTTACAATCAGATGCAACAACACAACTAGCCAAACTCCAATTACTTCAAAACATACTTCAAGTTCAATCCCTTAATTCCAATTCTACCCTCAACCCTTTTGGACCATCTTCATCATCAGTGTCAGAAAATTATCTGCATGAACTTTTAGGGTTGAATAAGGTTCCAAATAATATTTATAATGGTTTTCCTTCTTCTTCTTCTTCTCAAAATCAGCCAAATTTTCAACAAAATTTTGAAGTTCCTAATTTGCAACCAACTGATGAATATCAACATATAATGAATAGTGGTGATTGCATGGAGTCACAAAAGGTTGATGCAACATTAAATTCACTTCCAAATTTGGTTTCAGTGTCACCAGAATGTTCAACTATGAAAGAAATGGAAAATAAGGTAGTGAACCCAAATGATCAGTGTTCCAATCCTTCTTCAACTTCAACTAACTTTGAAATGTGGGGAGATTTTATGTATGAGGAAGTTAGTGATGCTTATTGGAAAGATCTCATAGACCAAGAGTCTAATGAGTAA

Protein:

Promoter(3k):

>AM05G010840.1
CGGATTTCCTAGCATTAGCGACAAATTTTTCCTCTGAAAATCAGTGAGATTCTTGTAGTAGCAGCTTATGGCGTCGAAAATCAGTGAGATTCTTGTAGTGACAGCTTATGGCTTATAGGAAAACAGTTCAACATTATTTTATCTTTTATCATAAAAACAGTCAATGCATAAGCTCTTATATAATAAACACTTATGTTATAAGTAGTTAATTAAACTATTAATCTAAACATGGCCCTAATCTTAACTCATACATGAATACACGATGATCGGTATTATCAATAGGCAAATGAAGTTTTTATTTTTATAAAATCTCATATAAGATTTCCTCAACAAAAAAAAGTCATATAAGCGACGAATACGTATTAGCTAGGGCTTTGTTGTGGGCCCCATAAAAAGACAATCTTTTTGTAGTGTTGCGTGATTCGAATTGCATTAATTTTGCATGCTTAGAAAACATGACCATAAGGACGATGTTAGAGATAGTCGATGTTTTCAGAGTGAGGAGGTCATCATAGACCACAAAAAATGAGCTTTTCATACTCCTAATAGGTTTGGTTGCCACGTGGAAACCTACCCTAGTTGGTAGTTTAAGTTTGTTGCTGATCTGTTACCTTTAGCCGTTGCATCTCTGTGTAAAGTACGGAGAAGGTAGCAATGGGGACATACGTATGTGCCTTGTCCTTTGTTTTTTTTTTTGGATATGTGCCTTGTTCTTGTTGTACAAGAGAAGTTCACGTTGAAAATTTGTACATACATCGTTAGAAATTTTCATCCCTTTGAGTAAGTATATGTTCATTGAAAAAAAAATGAATGTGCCTAATTAATTATGTTTCTACCCTATCCTTCTTACATATGTGTAGATATGCATTATTACTCTTAACCTCAAATGGTTATTTTAGTGGACCAAGGTAAAATTTCGTTTGAAGGTTCAAATTGTCGCTAATTTTTCTTTTTAATGAAAGGTAAATTATATAATTTTCTTTGTAAGTGTTTTTAACCGTGTAATTAAATTAGTTTGGATCGGCCGATCTGACGGTTGGAGTGGAATTGGTGATACAATTCACTACAAAAAAACTTGGTTATTAGCGAGGGATTTTTCCCTCGCAAAATGTCCGAAATCCGTCGCTAATCACCATTTGCGAGGGAATTAGCGAGGGACTGGTTTCCTCGCTAATTTTGGCTGTCATGCGTCCCAATTCTGACTGCCACGTGTCACAATTTTAATGGCTTGTTTTATGTGTTGTTTTATATTTTTTTAAACTGTTTTTATATATTTATTAATGTGGTGGTGGTGGTGGTGGTTGGGAGGAGCTATGTGGTGGTGGTGGTTGTGGTTGTGGTTCACTTCGTAGGAGAGAGGAGAGGAGTTCGTGGTGGTAGTGGGAGGAGCTATATGGTGTTCACTTCGTAGGAAAGAGAGGAGTTCGTGGTGGTGGTAGTGGGAGGAGCTATGTGGTGGTGGTGGTGGTACGTGGTTCACTTCGTAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGGGGGGGGAGAGAGAGATGGAGGATATATAGTGGTGGTGGGGGTGGTGGTGGTGGAAGGTGGAGAGAAGAAGAGAAAAAGAGTAAAGAATTCCGTAGGTGAGAGAAGAGGAATTCATAGGAGAGAGAGAGAGAGGAAGAGGAGAGGAGTTCATGGTGGTGGTGGTGGTGTGGTGTTGGAAGGTGGAGAAAATTCGAAGTGAAAGAGGGAAGAGGTGAGAAAAGAGATAAGATGAAATGAGAGTGTGTGGTCTGTGGTTATTTAAAGTAAAAAAAATAAAATTTACCCTTTGTGAGAGACTGGTCCCTCGCTAATTCCCTCGCTAACAGCAAATTTCGCTTCCCAAGGACTGTTCAACGGTCAGATTCACGTTAGCGAGGGACTGGTCCCTCGCTAATCACCTTATTTTTCGTGCTAAATTTTTCAAATTCCCGCCTCCTCGCTAATGTCAAAAATTCTGTCGCTAACCATTAGCAAGGGACTGGTCCCTCGCTAACTCCCTAGCTAATGTCAATTTTAGCGAGGGAATCACATTCCCTCGCTAATGTCCCTCGCAAATAAGCTTTTTTTTGTAGCGATTGGTCTGAATAAGTAATTGAATCGGACATGTCACGACCTAGTGTTACTTGATTGGTTTTGTGGTTGAACGAGTGACTCAGTGGGTCTGTTGAATTAGTGACCCCTATTTGGTCTTGGAAAATTTCTTTCTACCACAAAACAACGTCGTTTTGAGAGGGTTAGTCCGTAAAAAGAAAATTTGAAACAGTTTTTTTTCTTGCTACAAGAGTGTTTAAGGTATTGTAATATATATATATATATATATATATATATATATATATATATTTGAAGTATGAAATTTACACATATCATGAATTTTTTGGTAATATTTTAGTAGTGACGTAATCACGTGGTTCAACTAGTAAGTAATTTCTTCAATCAGTTACTCACTAATCTGTTATCTTAACCGAGTCAGTAAGCAGATCGAGCTTATTTATGACATTGAATTTTAAAGTCCAAACGTTCTATATTTTAGAATGACATCATCCGTCGACCCTAAATTTTATCAATTATAAAAATGCATTACTCTTAGGTCTTTTAATGTCCTTGAGGAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATGAGGGACAAAATTGGAATTTAAATACTATTATAACATGATAAAACAAATCTTAGTAAGCAACAAAGCATTGAAATTCCAAACATTACCATATGCTATATATAACAAGCACCTCTCTTCCAAACATCCAAGTTCCAACACAGAACTAAAATTCTATACAGGTTTGCATTCTTTTCCTCTCTCTTATAAACATGATATGAAAACTACTTCCAAAATCAAACCAACCTTTTACTCATAATAACTCCAATATATTTGTTTATGCAGTGTACTACAAGTA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00249.34	Myb_DNA-binding	15	62	6.60E-35
PF00249.34	Myb_DNA-binding	68	113	6.60E-35
PF13921.9	Myb_DNA-bind_6	18	77	3.80E-21
PF13921.9	Myb_DNA-bind_6	71	116	3.80E-21

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB

Gene Ontology

GO term	Description	Category
GO:0071365	cellular response to auxin stimulus	Biological Process
GO:0005737	cytoplasm	Cellular Component
GO:0016020	membrane	Cellular Component
GO:0003700	DNA-binding transcription factor activity	Molecular Function
GO:0006355	regulation of DNA-templated transcription	Biological Process

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
Q84PP5	_

SwissProt

SwissProt term	Description
MYB93_ARATH	Transcription factor MYB93

KEGG

KO	Description	Enzyme
K09422	transcription factor MYB, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G16770	myb domain protein 9
Medicago sativa L.	MsG0580025507.01.T01	_
Oryza sativa L.	LOC_Os08g37970.1	MYB family transcription factor, putative, expressed
Cucumis sativus L.	Csa018176	_
Glycyrrhiza uralensis Fisch.	Glyur000423s00024443.1	_
Codonopsis lanceolata	Cl_chr01_37710T	_
Arachis hypogaea L.	AH05G15100.1	Transcription factor MYB39 like

Expression pattern